RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 FHOD3Q2V2M9 1422 aa15.4■□□□□ 0.06
CLCN3-205ENST00000506924 PPP1R37O75864 691 aa15.39■□□□□ 0.05
CLCN3-205ENST00000506924 ARID3CA6NKF2 412 aa15.38■□□□□ 0.05
CLCN3-205ENST00000506924 PLCG2P16885 1265 aa15.38■□□□□ 0.05
CLCN3-205ENST00000506924 ABCC2Q92887 1545 aa15.37■□□□□ 0.05
CLCN3-205ENST00000506924 LOC105371045A0A1W2PR82 267 aa15.36■□□□□ 0.05
CLCN3-205ENST00000506924 UHRF1BP1LA0JNW5 1464 aa15.35■□□□□ 0.05
CLCN3-205ENST00000506924 ABCA8O94911 1581 aa15.34■□□□□ 0.05
CLCN3-205ENST00000506924 SEC24BO95487 1268 aa15.34■□□□□ 0.05
CLCN3-205ENST00000506924 METRNQ9UJH8 293 aa15.33■□□□□ 0.04
CLCN3-205ENST00000506924 EFCAB5A4FU69 1503 aa15.33■□□□□ 0.04
CLCN3-205ENST00000506924 ARHGAP35Q9NRY4 1499 aa15.32■□□□□ 0.04
CLCN3-205ENST00000506924 ZCCHC11Q5TAX3 1644 aaKnown RBP15.32■□□□□ 0.04
CLCN3-205ENST00000506924 MAPKBP1O60336 1514 aa15.31■□□□□ 0.04
CLCN3-205ENST00000506924 FAM69CQ0P6D2 419 aa15.3■□□□□ 0.04
CLCN3-205ENST00000506924 L3MBTL3Q96JM7 780 aaPredicted RBP15.3■□□□□ 0.04
CLCN3-205ENST00000506924 KDM5BQ9UGL1 1544 aa15.3■□□□□ 0.04
CLCN3-205ENST00000506924 KDM2AQ9Y2K7 1162 aa15.3■□□□□ 0.04
CLCN3-205ENST00000506924 ASXL2Q76L83 1435 aa15.29■□□□□ 0.04
CLCN3-205ENST00000506924 RAPGEF6Q8TEU7 1601 aa15.28■□□□□ 0.04
CLCN3-205ENST00000506924 ATP1B4Q9UN42 357 aaPredicted RBP15.28■□□□□ 0.04
CLCN3-205ENST00000506924 KIF13AQ9H1H9 1805 aa15.28■□□□□ 0.04
CLCN3-205ENST00000506924 TMEM121BQ9BXQ6 578 aaPredicted RBP15.27■□□□□ 0.04
CLCN3-205ENST00000506924 COLQQ9Y215 455 aaPredicted RBP15.27■□□□□ 0.04
CLCN3-205ENST00000506924 DPY19L2Q6NUT2 758 aa15.26■□□□□ 0.03
CLCN3-205ENST00000506924 ABCC10Q5T3U5 1492 aa15.26■□□□□ 0.03
CLCN3-205ENST00000506924 DIP2BQ9P265 1576 aa15.25■□□□□ 0.03
CLCN3-205ENST00000506924 BOLA1Q9Y3E2 137 aa15.25■□□□□ 0.03
CLCN3-205ENST00000506924 CLIP1P30622 1438 aa15.25■□□□□ 0.03
CLCN3-205ENST00000506924 POTEFA5A3E0 1075 aa15.24■□□□□ 0.03
CLCN3-205ENST00000506924 G3V3G9 751 aa15.24■□□□□ 0.03
CLCN3-205ENST00000506924 MICALL2Q8IY33 904 aa15.24■□□□□ 0.03
CLCN3-205ENST00000506924 KCNH8Q96L42 1107 aa15.24■□□□□ 0.03
CLCN3-205ENST00000506924 ATP10BO94823 1461 aa15.24■□□□□ 0.03
CLCN3-205ENST00000506924 NUP153P49790 1475 aaKnown RBP15.23■□□□□ 0.03
CLCN3-205ENST00000506924 CADPS2Q86UW7 1296 aa15.23■□□□□ 0.03
CLCN3-205ENST00000506924 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
CLCN3-205ENST00000506924 FMN1Q68DA7 1419 aa15.2■□□□□ 0.02
CLCN3-205ENST00000506924 WDR7Q9Y4E6 1490 aa15.2■□□□□ 0.02
CLCN3-205ENST00000506924 CEP162Q5TB80 1403 aa15.19■□□□□ 0.02
CLCN3-205ENST00000506924 PDE4AP27815 886 aa15.19■□□□□ 0.02
CLCN3-205ENST00000506924 EPRSP07814 1512 aaKnown RBP15.18■□□□□ 0.02
CLCN3-205ENST00000506924 CRISPLD2Q9H0B8 497 aa15.18■□□□□ 0.02
CLCN3-205ENST00000506924 CDK13Q14004 1512 aaKnown RBP15.17■□□□□ 0.02
CLCN3-205ENST00000506924 HECW1Q76N89 1606 aa15.14■□□□□ 0.01
CLCN3-205ENST00000506924 WDR70Q9NW82 654 aa15.14■□□□□ 0.01
CLCN3-205ENST00000506924 PCF11O94913 1555 aaKnown RBP15.14■□□□□ 0.01
CLCN3-205ENST00000506924 NCKAP5LQ9HCH0 1330 aa15.14■□□□□ 0.01
CLCN3-205ENST00000506924 PLEKHD1A6NEE1 506 aa15.13■□□□□ 0.01
CLCN3-205ENST00000506924 GLI2P10070 1586 aa15.13■□□□□ 0.01
CLCN3-205ENST00000506924 MFSD10Q14728 455 aa15.12■□□□□ 0.01
CLCN3-205ENST00000506924 LRRIQ1Q96JM4 1722 aa15.12■□□□□ 0.01
CLCN3-205ENST00000506924 CASKIN1Q8WXD9 1431 aa15.1■□□□□ 0.01
CLCN3-205ENST00000506924 GPHNQ9NQX3 736 aaPredicted RBP15.1■□□□□ 0.01
CLCN3-205ENST00000506924 MAP3K4Q9Y6R4 1608 aa15.1■□□□□ 0.01
CLCN3-205ENST00000506924 PPRC1Q5VV67 1664 aaKnown RBP15.09■□□□□ 0.01
CLCN3-205ENST00000506924 CD109Q6YHK3 1445 aa15.08■□□□□ 0
CLCN3-205ENST00000506924 TMC2Q8TDI7 906 aa15.06■□□□□ 0
CLCN3-205ENST00000506924 DDX27Q96GQ7 796 aaKnown RBP15.06■□□□□ 0
CLCN3-205ENST00000506924 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
CLCN3-205ENST00000506924 C3orf67Q6ZVT6 689 aa15.05■□□□□ -0
CLCN3-205ENST00000506924 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
CLCN3-205ENST00000506924 CFAP43Q8NDM7 1665 aa15.05■□□□□ -0
CLCN3-205ENST00000506924 KIF3CO14782 793 aa15.04■□□□□ -0
CLCN3-205ENST00000506924 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
CLCN3-205ENST00000506924 ABCA9Q8IUA7 1624 aa15.03■□□□□ -0
CLCN3-205ENST00000506924 CCDC18Q5T9S5 1454 aa15.01□□□□□ -0.01
CLCN3-205ENST00000506924 FOXK1P85037 733 aa15.01□□□□□ -0.01
CLCN3-205ENST00000506924 KDM6BO15054 1643 aa15.01□□□□□ -0.01
CLCN3-205ENST00000506924 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.01□□□□□ -0.01
CLCN3-205ENST00000506924 TTC37Q6PGP7 1564 aa15□□□□□ -0.01
CLCN3-205ENST00000506924 MAGI3Q5TCQ9 1506 aa15□□□□□ -0.01
CLCN3-205ENST00000506924 TEX14Q8IWB6 1497 aa15□□□□□ -0.01
CLCN3-205ENST00000506924 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
CLCN3-205ENST00000506924 KIF14Q15058 1648 aa14.99□□□□□ -0.01
CLCN3-205ENST00000506924 E2F4Q16254 413 aa14.99□□□□□ -0.01
CLCN3-205ENST00000506924 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.99□□□□□ -0.01
CLCN3-205ENST00000506924 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
CLCN3-205ENST00000506924 COL17A1Q9UMD9 1497 aaPredicted RBP14.98□□□□□ -0.01
CLCN3-205ENST00000506924 PPP1R15BQ5SWA1 713 aa14.98□□□□□ -0.01
CLCN3-205ENST00000506924 C2orf72A6NCS6 295 aa14.97□□□□□ -0.01
CLCN3-205ENST00000506924 MAMSTRQ6ZN01 415 aa14.97□□□□□ -0.01
CLCN3-205ENST00000506924 CAMK2BQ13554 666 aa14.96□□□□□ -0.01
CLCN3-205ENST00000506924 TMEM92Q6UXU6 159 aa14.95□□□□□ -0.02
CLCN3-205ENST00000506924 BCANQ96GW7 911 aa14.95□□□□□ -0.02
CLCN3-205ENST00000506924 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
CLCN3-205ENST00000506924 DSG2Q14126 1118 aa14.93□□□□□ -0.02
CLCN3-205ENST00000506924 MTUS2Q5JR59 1369 aa14.93□□□□□ -0.02
CLCN3-205ENST00000506924 POTEB2H3BUK9 544 aa14.92□□□□□ -0.02
CLCN3-205ENST00000506924 KCNV2Q8TDN2 545 aa14.91□□□□□ -0.02
CLCN3-205ENST00000506924 ARHGEF1Q92888 912 aaKnown RBP14.91□□□□□ -0.02
CLCN3-205ENST00000506924 FANCAO15360 1455 aa14.9□□□□□ -0.02
CLCN3-205ENST00000506924 MYO5CQ9NQX4 1742 aa14.9□□□□□ -0.02
CLCN3-205ENST00000506924 RAPGEF3O95398 923 aa14.9□□□□□ -0.02
CLCN3-205ENST00000506924 SCUBE2Q9NQ36 999 aa14.9□□□□□ -0.02
CLCN3-205ENST00000506924 PLCH2O75038 1416 aa14.9□□□□□ -0.02
CLCN3-205ENST00000506924 POTEJP0CG39 1038 aa14.89□□□□□ -0.03
CLCN3-205ENST00000506924 AKNAQ7Z591 1439 aa14.89□□□□□ -0.03
CLCN3-205ENST00000506924 TIAM1Q13009 1591 aa14.89□□□□□ -0.03
CLCN3-205ENST00000506924 NEO1Q92859 1461 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms