RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 CROCC2H7BZ55 1655 aa13.32□□□□□ -0.28
SCAMP1-202ENST00000506858 KIF3BO15066 747 aa13.32□□□□□ -0.28
SCAMP1-202ENST00000506858 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
SCAMP1-202ENST00000506858 ARHGEF40Q8TER5 1519 aa13.32□□□□□ -0.28
SCAMP1-202ENST00000506858 A2MP01023 1474 aa13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 GGT6Q6P531 493 aa13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
SCAMP1-202ENST00000506858 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
SCAMP1-202ENST00000506858 ROCK1Q13464 1354 aa13.28□□□□□ -0.28
SCAMP1-202ENST00000506858 ADGBQ8N7X0 1667 aa13.28□□□□□ -0.28
SCAMP1-202ENST00000506858 NAIPQ13075 1403 aa13.27□□□□□ -0.29
SCAMP1-202ENST00000506858 ANKRD50Q9ULJ7 1429 aa13.26□□□□□ -0.29
SCAMP1-202ENST00000506858 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
SCAMP1-202ENST00000506858 PLXNC1O60486 1568 aa13.25□□□□□ -0.29
SCAMP1-202ENST00000506858 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
SCAMP1-202ENST00000506858 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
SCAMP1-202ENST00000506858 U3KPZ7 1027 aaPredicted RBP13.24□□□□□ -0.29
SCAMP1-202ENST00000506858 TRIM52Q96A61 297 aa13.22□□□□□ -0.29
SCAMP1-202ENST00000506858 HFM1A2PYH4 1435 aa13.22□□□□□ -0.29
SCAMP1-202ENST00000506858 SETD5Q9C0A6 1442 aa13.21□□□□□ -0.29
SCAMP1-202ENST00000506858 CEBPAP49715 358 aaPredicted RBP13.21□□□□□ -0.3
SCAMP1-202ENST00000506858 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.3
SCAMP1-202ENST00000506858 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
SCAMP1-202ENST00000506858 AGLP35573 1532 aa13.2□□□□□ -0.3
SCAMP1-202ENST00000506858 ERBINQ96RT1 1412 aa13.2□□□□□ -0.3
SCAMP1-202ENST00000506858 WASHC2CQ9Y4E1 1318 aa13.18□□□□□ -0.3
SCAMP1-202ENST00000506858 SLC4A2P04920 1241 aa13.18□□□□□ -0.3
SCAMP1-202ENST00000506858 NUP155O75694 1391 aa13.18□□□□□ -0.3
SCAMP1-202ENST00000506858 ESF1Q9H501 851 aaKnown RBP13.17□□□□□ -0.3
SCAMP1-202ENST00000506858 BCORL1Q5H9F3 1711 aa13.16□□□□□ -0.3
SCAMP1-202ENST00000506858 MROH1Q8NDA8 1641 aa13.16□□□□□ -0.3
SCAMP1-202ENST00000506858 GCC2Q8IWJ2 1684 aa13.15□□□□□ -0.3
SCAMP1-202ENST00000506858 MADDQ8WXG6 1647 aa13.14□□□□□ -0.31
SCAMP1-202ENST00000506858 FBXO31Q5XUX0 539 aaPredicted RBP13.14□□□□□ -0.31
SCAMP1-202ENST00000506858 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
SCAMP1-202ENST00000506858 EIF2AK4Q9P2K8 1649 aaKnown RBP13.13□□□□□ -0.31
SCAMP1-202ENST00000506858 ADAMTSL3P82987 1691 aa13.12□□□□□ -0.31
SCAMP1-202ENST00000506858 RNF17Q9BXT8 1623 aaKnown RBP13.12□□□□□ -0.31
SCAMP1-202ENST00000506858 ZMYM3Q14202 1370 aa13.12□□□□□ -0.31
SCAMP1-202ENST00000506858 KANK1Q14678 1352 aa13.12□□□□□ -0.31
SCAMP1-202ENST00000506858 MPHOSPH9Q99550 1183 aa13.11□□□□□ -0.31
SCAMP1-202ENST00000506858 CLTCQ00610 1675 aaKnown RBP13.11□□□□□ -0.31
SCAMP1-202ENST00000506858 ABCC3O15438 1527 aa13.11□□□□□ -0.31
SCAMP1-202ENST00000506858 RIMS1Q86UR5 1692 aaKnown RBP13.1□□□□□ -0.31
SCAMP1-202ENST00000506858 PKD2Q13563 968 aa13.1□□□□□ -0.31
SCAMP1-202ENST00000506858 CEP152O94986 1710 aa13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 DEPDC5O75140 1603 aa13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 UNC13BO14795 1591 aa13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 PZPP20742 1482 aa13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 PRDM15P57071 1507 aaPredicted RBP13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
SCAMP1-202ENST00000506858 PTPRMP28827 1452 aa13.08□□□□□ -0.32
SCAMP1-202ENST00000506858 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
SCAMP1-202ENST00000506858 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
SCAMP1-202ENST00000506858 VWDEQ8N2E2 1590 aa13.07□□□□□ -0.32
SCAMP1-202ENST00000506858 CAPN15O75808 1086 aa13.06□□□□□ -0.32
SCAMP1-202ENST00000506858 NPATQ14207 1427 aa13.06□□□□□ -0.32
SCAMP1-202ENST00000506858 MYCNP04198 464 aaPredicted RBP13.06□□□□□ -0.32
SCAMP1-202ENST00000506858 HRCP23327 699 aa13.06□□□□□ -0.32
SCAMP1-202ENST00000506858 CNTLNQ9NXG0 1405 aa13.05□□□□□ -0.32
SCAMP1-202ENST00000506858 IQGAP3Q86VI3 1631 aa13.04□□□□□ -0.32
SCAMP1-202ENST00000506858 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
SCAMP1-202ENST00000506858 C3P01024 1663 aa13.03□□□□□ -0.32
SCAMP1-202ENST00000506858 LMTK2Q8IWU2 1503 aa13.02□□□□□ -0.32
SCAMP1-202ENST00000506858 FOXD4L1Q9NU39 408 aa13.01□□□□□ -0.33
SCAMP1-202ENST00000506858 EFCAB6Q5THR3 1501 aa13.01□□□□□ -0.33
SCAMP1-202ENST00000506858 E9PCH4 1651 aa13.01□□□□□ -0.33
SCAMP1-202ENST00000506858 TET3O43151 1660 aa13□□□□□ -0.33
SCAMP1-202ENST00000506858 DHX57Q6P158 1386 aaKnown RBP13□□□□□ -0.33
SCAMP1-202ENST00000506858 ZNF219Q9P2Y4 722 aaPredicted RBP13□□□□□ -0.33
SCAMP1-202ENST00000506858 ERVK-7P63135 1459 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 TNRQ92752 1358 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 IDI1Q13907 227 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 UGGT1Q9NYU2 1555 aa12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
SCAMP1-202ENST00000506858 ZC3H13Q5T200 1668 aaKnown RBP12.98□□□□□ -0.33
SCAMP1-202ENST00000506858 MROH2AA6NES4 1674 aa12.98□□□□□ -0.33
SCAMP1-202ENST00000506858 SIN3AQ96ST3 1273 aa12.98□□□□□ -0.33
SCAMP1-202ENST00000506858 HSPA2P54652 639 aa12.97□□□□□ -0.33
SCAMP1-202ENST00000506858 NOS1P29475 1434 aa12.97□□□□□ -0.33
SCAMP1-202ENST00000506858 PREX1Q8TCU6 1659 aa12.95□□□□□ -0.34
SCAMP1-202ENST00000506858 SYNMO15061 1565 aa12.95□□□□□ -0.34
SCAMP1-202ENST00000506858 NEUROD1Q13562 356 aa12.95□□□□□ -0.34
SCAMP1-202ENST00000506858 ANKRD30BQ9BXX2 1392 aa12.94□□□□□ -0.34
SCAMP1-202ENST00000506858 PTPRTO14522 1441 aa12.94□□□□□ -0.34
SCAMP1-202ENST00000506858 SPATA31D1Q6ZQQ2 1576 aa12.94□□□□□ -0.34
SCAMP1-202ENST00000506858 CCER1Q8TC90 406 aaPredicted RBP12.94□□□□□ -0.34
SCAMP1-202ENST00000506858 RPRD2Q5VT52 1461 aaKnown RBP12.93□□□□□ -0.34
SCAMP1-202ENST00000506858 ACIN1Q9UKV3 1341 aaKnown RBP12.93□□□□□ -0.34
SCAMP1-202ENST00000506858 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
SCAMP1-202ENST00000506858 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
SCAMP1-202ENST00000506858 STAG3Q9UJ98 1225 aa12.93□□□□□ -0.34
SCAMP1-202ENST00000506858 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
SCAMP1-202ENST00000506858 SLC52A1Q9NWF4 448 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms