RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 ZBTB12Q9Y330 459 aaPredicted RBP7.81□□□□□ -1.16
CPNE4-207ENST00000506687 EFCAB5A4FU69 1503 aa7.8□□□□□ -1.16
CPNE4-207ENST00000506687 SLC24A3Q9HC58 644 aa7.8□□□□□ -1.16
CPNE4-207ENST00000506687 DENND4BO75064 1496 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-207ENST00000506687 FHOD3Q2V2M9 1422 aa7.79□□□□□ -1.16
CPNE4-207ENST00000506687 ZC3H15Q8WU90 426 aaKnown RBP7.79□□□□□ -1.16
CPNE4-207ENST00000506687 WDR70Q9NW82 654 aa7.79□□□□□ -1.16
CPNE4-207ENST00000506687 ABCA8O94911 1581 aa7.79□□□□□ -1.16
CPNE4-207ENST00000506687 ARHGEF12Q9NZN5 1544 aa7.78□□□□□ -1.16
CPNE4-207ENST00000506687 GSE1Q14687 1217 aa7.78□□□□□ -1.16
CPNE4-207ENST00000506687 MAGI2Q86UL8 1455 aa7.77□□□□□ -1.17
CPNE4-207ENST00000506687 CACNB1Q02641 598 aaPredicted RBP7.77□□□□□ -1.17
CPNE4-207ENST00000506687 ZMYND15Q9H091 742 aa7.77□□□□□ -1.17
CPNE4-207ENST00000506687 CLIP1P30622 1438 aa7.77□□□□□ -1.17
CPNE4-207ENST00000506687 POTEAQ6S8J7 498 aa7.76□□□□□ -1.17
CPNE4-207ENST00000506687 RYDENQ9NUL5 291 aaKnown RBP7.76□□□□□ -1.17
CPNE4-207ENST00000506687 ZFYVE16Q7Z3T8 1539 aa7.76□□□□□ -1.17
CPNE4-207ENST00000506687 CAPN15O75808 1086 aa7.75□□□□□ -1.17
CPNE4-207ENST00000506687 CEP162Q5TB80 1403 aa7.75□□□□□ -1.17
CPNE4-207ENST00000506687 TRAPPC8Q9Y2L5 1435 aa7.75□□□□□ -1.17
CPNE4-207ENST00000506687 NCKAP5LQ9HCH0 1330 aa7.75□□□□□ -1.17
CPNE4-207ENST00000506687 ABCA9Q8IUA7 1624 aa7.74□□□□□ -1.17
CPNE4-207ENST00000506687 FER1L4A9Z1Z3 1794 aa7.74□□□□□ -1.17
CPNE4-207ENST00000506687 UPF1Q92900 1129 aaKnown RBP eCLIP7.74□□□□□ -1.17
CPNE4-207ENST00000506687 ARID3AQ99856 593 aa7.74□□□□□ -1.17
CPNE4-207ENST00000506687 RSPH6AQ9H0K4 717 aa7.74□□□□□ -1.17
CPNE4-207ENST00000506687 ATP10BO94823 1461 aa7.74□□□□□ -1.17
CPNE4-207ENST00000506687 ZMYM4Q5VZL5 1548 aa7.73□□□□□ -1.17
CPNE4-207ENST00000506687 PTPRKQ15262 1439 aa7.73□□□□□ -1.17
CPNE4-207ENST00000506687 FMN1Q68DA7 1419 aa7.73□□□□□ -1.17
CPNE4-207ENST00000506687 VGFO15240 615 aaPredicted RBP7.73□□□□□ -1.17
CPNE4-207ENST00000506687 STK24Q9Y6E0 443 aa7.73□□□□□ -1.17
CPNE4-207ENST00000506687 RAPGEF6Q8TEU7 1601 aa7.73□□□□□ -1.17
CPNE4-207ENST00000506687 NUP153P49790 1475 aaKnown RBP7.73□□□□□ -1.17
CPNE4-207ENST00000506687 DCAF8Q5TAQ9 597 aa7.72□□□□□ -1.17
CPNE4-207ENST00000506687 SSUH2Q9Y2M2 353 aa7.72□□□□□ -1.17
CPNE4-207ENST00000506687 C9orf84Q5VXU9 1444 aa7.71□□□□□ -1.17
CPNE4-207ENST00000506687 ATP10AO60312 1499 aa7.71□□□□□ -1.18
CPNE4-207ENST00000506687 ABCB7O75027 752 aa7.71□□□□□ -1.18
CPNE4-207ENST00000506687 BCL11BQ9C0K0 894 aaPredicted RBP7.71□□□□□ -1.18
CPNE4-207ENST00000506687 SIGLEC1Q9BZZ2 1709 aa7.71□□□□□ -1.18
CPNE4-207ENST00000506687 CAMSAP1Q5T5Y3 1602 aa7.7□□□□□ -1.18
CPNE4-207ENST00000506687 CASKIN1Q8WXD9 1431 aa7.7□□□□□ -1.18
CPNE4-207ENST00000506687 CADPS2Q86UW7 1296 aa7.7□□□□□ -1.18
CPNE4-207ENST00000506687 CPS1P31327 1500 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 SPDYE2BA6NHP3 402 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 ARID3CA6NKF2 412 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 SPDYE6P0CI01 402 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 SPDYE2Q495Y8 402 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 ESF1Q9H501 851 aaKnown RBP7.69□□□□□ -1.18
CPNE4-207ENST00000506687 SRCAPQ6ZRS2 3230 aa7.69□□□□□ -1.18
CPNE4-207ENST00000506687 PLA2R1Q13018 1463 aa7.68□□□□□ -1.18
CPNE4-207ENST00000506687 RICTORQ6R327 1708 aa7.68□□□□□ -1.18
CPNE4-207ENST00000506687 LRRIQ1Q96JM4 1722 aa7.67□□□□□ -1.18
CPNE4-207ENST00000506687 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.67□□□□□ -1.18
CPNE4-207ENST00000506687 ZFP91Q96JP5 570 aaPredicted RBP7.67□□□□□ -1.18
CPNE4-207ENST00000506687 TCOF1Q13428 1488 aaKnown RBP7.67□□□□□ -1.18
CPNE4-207ENST00000506687 FYCO1Q9BQS8 1478 aa7.67□□□□□ -1.18
CPNE4-207ENST00000506687 NUBP1P53384 320 aa7.66□□□□□ -1.18
CPNE4-207ENST00000506687 VPS8Q8N3P4 1428 aa7.66□□□□□ -1.18
CPNE4-207ENST00000506687 CDK13Q14004 1512 aaKnown RBP7.66□□□□□ -1.18
CPNE4-207ENST00000506687 HECW1Q76N89 1606 aa7.66□□□□□ -1.18
CPNE4-207ENST00000506687 PLEKHD1A6NEE1 506 aa7.65□□□□□ -1.18
CPNE4-207ENST00000506687 NPATQ14207 1427 aa7.65□□□□□ -1.18
CPNE4-207ENST00000506687 IFFO2Q5TF58 517 aa7.65□□□□□ -1.18
CPNE4-207ENST00000506687 SETD1BQ9UPS6 1966 aaKnown RBP7.65□□□□□ -1.18
CPNE4-207ENST00000506687 SHANK2Q9UPX8 1470 aa7.64□□□□□ -1.19
CPNE4-207ENST00000506687 RNF39Q9H2S5 420 aa7.64□□□□□ -1.19
CPNE4-207ENST00000506687 ATP1B4Q9UN42 357 aaPredicted RBP7.64□□□□□ -1.19
CPNE4-207ENST00000506687 CCDC18Q5T9S5 1454 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 SCAPERQ9BY12 1400 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 CNTLNQ9NXG0 1405 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 SEMA3EO15041 775 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 ZMYND10O75800 440 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 IL27Q8NEV9 243 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 SGIP1Q9BQI5 828 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 ALKQ9UM73 1620 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 CFAP74Q9C0B2 1584 aa7.63□□□□□ -1.19
CPNE4-207ENST00000506687 TROQ12816 1431 aaPredicted RBP7.62□□□□□ -1.19
CPNE4-207ENST00000506687 ARHGEF1Q92888 912 aaKnown RBP7.62□□□□□ -1.19
CPNE4-207ENST00000506687 CDK11AQ9UQ88 783 aaPredicted RBP7.62□□□□□ -1.19
CPNE4-207ENST00000506687 MAP3K1Q13233 1512 aa7.62□□□□□ -1.19
CPNE4-207ENST00000506687 ZBTB7CA1YPR0 619 aa7.61□□□□□ -1.19
CPNE4-207ENST00000506687 TESPA1A2RU30 521 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-207ENST00000506687 GPBP1L1Q9HC44 474 aaPredicted RBP7.61□□□□□ -1.19
CPNE4-207ENST00000506687 CCDC9Q9Y3X0 531 aaKnown RBP7.61□□□□□ -1.19
CPNE4-207ENST00000506687 C3P01024 1663 aa7.6□□□□□ -1.19
CPNE4-207ENST00000506687 PDIA4P13667 645 aaKnown RBP7.6□□□□□ -1.19
CPNE4-207ENST00000506687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.6□□□□□ -1.19
CPNE4-207ENST00000506687 AGLP35573 1532 aa7.59□□□□□ -1.19
CPNE4-207ENST00000506687 SETD1AO15047 1707 aaKnown RBP7.59□□□□□ -1.19
CPNE4-207ENST00000506687 KANK4Q5T7N3 995 aaPredicted RBP7.59□□□□□ -1.19
CPNE4-207ENST00000506687 TIAM1Q13009 1591 aa7.59□□□□□ -1.2
CPNE4-207ENST00000506687 TRIM52Q96A61 297 aa7.58□□□□□ -1.2
CPNE4-207ENST00000506687 FAM212AQ96EL1 285 aa7.58□□□□□ -1.2
CPNE4-207ENST00000506687 ZRANB1Q9UGI0 708 aa7.58□□□□□ -1.2
CPNE4-207ENST00000506687 ZMYM3Q14202 1370 aa7.58□□□□□ -1.2
CPNE4-207ENST00000506687 KIF14Q15058 1648 aa7.57□□□□□ -1.2
CPNE4-207ENST00000506687 APBB1O00213 710 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms