RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 TSR1Q2NL82 804 aaKnown RBP6.91□□□□□ -1.3
GYPB-207ENST00000506679 CDHR5Q9HBB8 845 aa6.91□□□□□ -1.3
GYPB-207ENST00000506679 NPDC1Q9NQX5 325 aaPredicted RBP6.91□□□□□ -1.3
GYPB-207ENST00000506679 FAM205CA6NFA0 338 aa6.9□□□□□ -1.3
GYPB-207ENST00000506679 PTGDRQ13258 359 aa6.9□□□□□ -1.3
GYPB-207ENST00000506679 C6orf132Q5T0Z8 1188 aa6.9□□□□□ -1.3
GYPB-207ENST00000506679 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
GYPB-207ENST00000506679 HS3ST6Q96QI5 342 aa6.9□□□□□ -1.3
GYPB-207ENST00000506679 POTEEQ6S8J3 1075 aa6.89□□□□□ -1.31
GYPB-207ENST00000506679 ZNF687Q8N1G0 1237 aa6.89□□□□□ -1.31
GYPB-207ENST00000506679 ZMYND10O75800 440 aa6.88□□□□□ -1.31
GYPB-207ENST00000506679 TPRNQ4KMQ1 711 aa6.88□□□□□ -1.31
GYPB-207ENST00000506679 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
GYPB-207ENST00000506679 FCHSD2O94868 740 aa6.87□□□□□ -1.31
GYPB-207ENST00000506679 COL9A1P20849 921 aa6.87□□□□□ -1.31
GYPB-207ENST00000506679 HIC1Q14526 733 aa6.87□□□□□ -1.31
GYPB-207ENST00000506679 CERKQ8TCT0 537 aa6.87□□□□□ -1.31
GYPB-207ENST00000506679 PPP1R3GB7ZBB8 358 aa6.86□□□□□ -1.31
GYPB-207ENST00000506679 PTPREP23469 700 aa6.86□□□□□ -1.31
GYPB-207ENST00000506679 PBX2P40425 430 aa6.86□□□□□ -1.31
GYPB-207ENST00000506679 BARGINQ6ZT62 677 aa6.86□□□□□ -1.31
GYPB-207ENST00000506679 RBM27Q9P2N5 1060 aaKnown RBP6.86□□□□□ -1.31
GYPB-207ENST00000506679 ARHGAP33O14559 1287 aa6.85□□□□□ -1.31
GYPB-207ENST00000506679 GNPATO15228 680 aa6.85□□□□□ -1.31
GYPB-207ENST00000506679 PRKCSHP14314 528 aaPredicted RBP6.85□□□□□ -1.31
GYPB-207ENST00000506679 TTC13Q8NBP0 860 aa6.85□□□□□ -1.31
GYPB-207ENST00000506679 KCNK17Q96T54 332 aa6.84□□□□□ -1.31
GYPB-207ENST00000506679 FECHP22830 423 aa6.83□□□□□ -1.32
GYPB-207ENST00000506679 PSEN2P49810 448 aa6.83□□□□□ -1.32
GYPB-207ENST00000506679 ZBED2Q9BTP6 218 aa6.83□□□□□ -1.32
GYPB-207ENST00000506679 SLC4A5Q9BY07 1137 aa6.83□□□□□ -1.32
GYPB-207ENST00000506679 AXIN2Q9Y2T1 843 aa6.82□□□□□ -1.32
GYPB-207ENST00000506679 PRSS12P56730 875 aa6.81□□□□□ -1.32
GYPB-207ENST00000506679 MAP2K5Q13163 448 aa6.81□□□□□ -1.32
GYPB-207ENST00000506679 DMRTA1Q5VZB9 504 aa6.81□□□□□ -1.32
GYPB-207ENST00000506679 CDCA7LQ96GN5 454 aa6.81□□□□□ -1.32
GYPB-207ENST00000506679 FAM198AQ9UFP1 575 aa6.81□□□□□ -1.32
GYPB-207ENST00000506679 ONECUT3O60422 494 aaPredicted RBP6.8□□□□□ -1.32
GYPB-207ENST00000506679 PADI6Q6TGC4 694 aa6.8□□□□□ -1.32
GYPB-207ENST00000506679 KCNH8Q96L42 1107 aa6.8□□□□□ -1.32
GYPB-207ENST00000506679 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
GYPB-207ENST00000506679 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
GYPB-207ENST00000506679 TSKSQ9UJT2 592 aa6.8□□□□□ -1.32
GYPB-207ENST00000506679 MINK1Q8N4C8 1332 aaPredicted RBP6.79□□□□□ -1.32
GYPB-207ENST00000506679 TRIM6-TRIM34B2RNG4 842 aa6.79□□□□□ -1.32
GYPB-207ENST00000506679 PROX2Q3B8N5 592 aa6.79□□□□□ -1.32
GYPB-207ENST00000506679 TK2O00142 265 aa6.78□□□□□ -1.32
GYPB-207ENST00000506679 IRF6O14896 467 aa6.78□□□□□ -1.32
GYPB-207ENST00000506679 LSM11P83369 360 aaKnown RBP eCLIP6.78□□□□□ -1.32
GYPB-207ENST00000506679 C3orf80F5H4A9 247 aa6.77□□□□□ -1.33
GYPB-207ENST00000506679 CCDC102AQ96A19 550 aa6.77□□□□□ -1.33
GYPB-207ENST00000506679 SLC24A3Q9HC58 644 aa6.77□□□□□ -1.33
GYPB-207ENST00000506679 VPS9D1Q9Y2B5 631 aa6.77□□□□□ -1.33
GYPB-207ENST00000506679 ADGRG1Q9Y653 693 aa6.77□□□□□ -1.33
GYPB-207ENST00000506679 BHMG1C9JSJ3 638 aaPredicted RBP6.76□□□□□ -1.33
GYPB-207ENST00000506679 RABGEF1Q9UJ41 708 aa6.76□□□□□ -1.33
GYPB-207ENST00000506679 AK7Q96M32 723 aa6.75□□□□□ -1.33
GYPB-207ENST00000506679 HRO43593 1189 aa6.74□□□□□ -1.33
GYPB-207ENST00000506679 ADGRD1Q6QNK2 874 aa6.74□□□□□ -1.33
GYPB-207ENST00000506679 METTL3Q86U44 580 aaKnown RBP6.74□□□□□ -1.33
GYPB-207ENST00000506679 CDAN1Q8IWY9 1227 aa6.74□□□□□ -1.33
GYPB-207ENST00000506679 KRI1Q8N9T8 703 aaKnown RBP6.74□□□□□ -1.33
GYPB-207ENST00000506679 PXYLP1Q8TE99 480 aa6.74□□□□□ -1.33
GYPB-207ENST00000506679 EYA1Q99502 592 aa6.74□□□□□ -1.33
GYPB-207ENST00000506679 NBPF26B4DH59 902 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 TRIM66O15016 1216 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 AMHR2Q16671 573 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 FAM161AQ3B820 660 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 PACS2Q86VP3 889 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 PHOX2BQ99453 314 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 KIAA1468Q9P260 1216 aa6.73□□□□□ -1.33
GYPB-207ENST00000506679 OATP04181 439 aa6.72□□□□□ -1.33
GYPB-207ENST00000506679 NUDT18Q6ZVK8 323 aa6.72□□□□□ -1.33
GYPB-207ENST00000506679 TATDN2Q93075 761 aa6.72□□□□□ -1.33
GYPB-207ENST00000506679 TMUB1Q9BVT8 246 aa6.71□□□□□ -1.34
GYPB-207ENST00000506679 PNMA3Q9UL41 463 aa6.71□□□□□ -1.34
GYPB-207ENST00000506679 LAPTM4BQ86VI4 370 aa6.7□□□□□ -1.34
GYPB-207ENST00000506679 RBM46Q8TBY0 533 aaKnown RBP6.7□□□□□ -1.34
GYPB-207ENST00000506679 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.69□□□□□ -1.34
GYPB-207ENST00000506679 NBPF3Q9H094 633 aa6.69□□□□□ -1.34
GYPB-207ENST00000506679 RCCD1A6NED2 376 aa6.68□□□□□ -1.34
GYPB-207ENST00000506679 SMAPO00193 183 aa6.68□□□□□ -1.34
GYPB-207ENST00000506679 DNAJB2P25686 324 aa6.68□□□□□ -1.34
GYPB-207ENST00000506679 PDE4DQ08499 809 aa6.68□□□□□ -1.34
GYPB-207ENST00000506679 FAM98CQ17RN3 349 aaKnown RBP6.68□□□□□ -1.34
GYPB-207ENST00000506679 ANKRD13DQ6ZTN6 518 aa6.68□□□□□ -1.34
GYPB-207ENST00000506679 SEPT9Q9UHD8 586 aaPredicted RBP6.68□□□□□ -1.34
GYPB-207ENST00000506679 BRPF1P55201 1214 aaPredicted RBP6.67□□□□□ -1.34
GYPB-207ENST00000506679 PARP9Q8IXQ6 854 aa6.67□□□□□ -1.34
GYPB-207ENST00000506679 REPIN1Q9BWE0 567 aaKnown RBP6.67□□□□□ -1.34
GYPB-207ENST00000506679 TMEM134Q9H6X4 195 aa6.67□□□□□ -1.34
GYPB-207ENST00000506679 MRPL50Q8N5N7 158 aaKnown RBP6.65□□□□□ -1.34
GYPB-207ENST00000506679 NLRP7Q8WX94 980 aa6.65□□□□□ -1.34
GYPB-207ENST00000506679 GPCPD1Q9NPB8 672 aa6.65□□□□□ -1.34
GYPB-207ENST00000506679 CLCN1P35523 988 aa6.64□□□□□ -1.35
GYPB-207ENST00000506679 MDM2Q00987 491 aaPredicted RBP6.64□□□□□ -1.35
GYPB-207ENST00000506679 ZFRQ96KR1 1074 aaKnown RBP6.64□□□□□ -1.35
GYPB-207ENST00000506679 GIGYF2Q6Y7W6 1299 aaKnown RBP6.63□□□□□ -1.35
GYPB-207ENST00000506679 DAXXQ9UER7 740 aaPredicted RBP6.63□□□□□ -1.35
GYPB-207ENST00000506679 MMRN1Q13201 1228 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms