RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 ARHGEF5Q12774 1597 aa11.11□□□□□ -0.63
GYPB-206ENST00000506516 DIP2CQ9Y2E4 1556 aa11.11□□□□□ -0.63
GYPB-206ENST00000506516 DHX29Q7Z478 1369 aaKnown RBP11.11□□□□□ -0.63
GYPB-206ENST00000506516 A2MP01023 1474 aa11.11□□□□□ -0.63
GYPB-206ENST00000506516 REREQ9P2R6 1566 aa11.11□□□□□ -0.63
GYPB-206ENST00000506516 KIDINS220Q9ULH0 1771 aa11.11□□□□□ -0.63
GYPB-206ENST00000506516 PTPN23Q9H3S7 1636 aa11.1□□□□□ -0.63
GYPB-206ENST00000506516 SPDYE4A6NLX3 237 aa11.1□□□□□ -0.63
GYPB-206ENST00000506516 RBM42Q9BTD8 480 aaKnown RBP11.1□□□□□ -0.63
GYPB-206ENST00000506516 TCOF1Q13428 1488 aaKnown RBP11.1□□□□□ -0.63
GYPB-206ENST00000506516 ABCA6Q8N139 1617 aa11.09□□□□□ -0.63
GYPB-206ENST00000506516 GGT6Q6P531 493 aa11.09□□□□□ -0.63
GYPB-206ENST00000506516 BCORL1Q5H9F3 1711 aa11.09□□□□□ -0.63
GYPB-206ENST00000506516 AGLP35573 1532 aa11.09□□□□□ -0.63
GYPB-206ENST00000506516 ABCC5O15440 1437 aa11.09□□□□□ -0.63
GYPB-206ENST00000506516 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
GYPB-206ENST00000506516 KIF3BO15066 747 aa11.08□□□□□ -0.64
GYPB-206ENST00000506516 CHIC2Q9UKJ5 165 aa11.08□□□□□ -0.64
GYPB-206ENST00000506516 RRP7BPQ9NSQ0 103 aa11.07□□□□□ -0.64
GYPB-206ENST00000506516 DAPK1P53355 1430 aa11.07□□□□□ -0.64
GYPB-206ENST00000506516 ADAMTSL3P82987 1691 aa11.07□□□□□ -0.64
GYPB-206ENST00000506516 PTPRMP28827 1452 aa11.06□□□□□ -0.64
GYPB-206ENST00000506516 ANKRD30AQ9BXX3 1397 aa11.05□□□□□ -0.64
GYPB-206ENST00000506516 MAST1Q9Y2H9 1570 aa11.05□□□□□ -0.64
GYPB-206ENST00000506516 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
GYPB-206ENST00000506516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.04□□□□□ -0.64
GYPB-206ENST00000506516 SIGLEC1Q9BZZ2 1709 aa11.04□□□□□ -0.64
GYPB-206ENST00000506516 ITGAEP38570 1179 aa11.04□□□□□ -0.64
GYPB-206ENST00000506516 MADDQ8WXG6 1647 aa11.04□□□□□ -0.64
GYPB-206ENST00000506516 ADGBQ8N7X0 1667 aa11.04□□□□□ -0.64
GYPB-206ENST00000506516 CNTLNQ9NXG0 1405 aa11.03□□□□□ -0.64
GYPB-206ENST00000506516 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
GYPB-206ENST00000506516 PLXNC1O60486 1568 aa11.03□□□□□ -0.64
GYPB-206ENST00000506516 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
GYPB-206ENST00000506516 DNMT1P26358 1616 aaKnown RBP11.02□□□□□ -0.64
GYPB-206ENST00000506516 CEBPAP49715 358 aaPredicted RBP11.02□□□□□ -0.65
GYPB-206ENST00000506516 NCOA1Q15788 1441 aa11.01□□□□□ -0.65
GYPB-206ENST00000506516 ZMYM3Q14202 1370 aa11.01□□□□□ -0.65
GYPB-206ENST00000506516 DUOX2Q9NRD8 1548 aa11□□□□□ -0.65
GYPB-206ENST00000506516 RIMS1Q86UR5 1692 aaKnown RBP11□□□□□ -0.65
GYPB-206ENST00000506516 RRBP1Q9P2E9 1410 aaKnown RBP11□□□□□ -0.65
GYPB-206ENST00000506516 FER1L4A9Z1Z3 1794 aa10.98□□□□□ -0.65
GYPB-206ENST00000506516 ROCK1Q13464 1354 aa10.98□□□□□ -0.65
GYPB-206ENST00000506516 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
GYPB-206ENST00000506516 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
GYPB-206ENST00000506516 CROCC2H7BZ55 1655 aa10.98□□□□□ -0.65
GYPB-206ENST00000506516 PTPRKQ15262 1439 aa10.97□□□□□ -0.65
GYPB-206ENST00000506516 KANK1Q14678 1352 aa10.96□□□□□ -0.65
GYPB-206ENST00000506516 ANKRD50Q9ULJ7 1429 aa10.95□□□□□ -0.66
GYPB-206ENST00000506516 EIF2AK4Q9P2K8 1649 aaKnown RBP10.95□□□□□ -0.66
GYPB-206ENST00000506516 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
GYPB-206ENST00000506516 PROM2Q8N271 834 aa10.93□□□□□ -0.66
GYPB-206ENST00000506516 KDM5DQ9BY66 1539 aa10.93□□□□□ -0.66
GYPB-206ENST00000506516 NPATQ14207 1427 aa10.92□□□□□ -0.66
GYPB-206ENST00000506516 CLTCQ00610 1675 aaKnown RBP10.92□□□□□ -0.66
GYPB-206ENST00000506516 UHRF1BP1Q6BDS2 1440 aa10.92□□□□□ -0.66
GYPB-206ENST00000506516 MROH2AA6NES4 1674 aa10.92□□□□□ -0.66
GYPB-206ENST00000506516 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
GYPB-206ENST00000506516 C3P01024 1663 aa10.91□□□□□ -0.66
GYPB-206ENST00000506516 RNF17Q9BXT8 1623 aaKnown RBP10.91□□□□□ -0.66
GYPB-206ENST00000506516 PZPP20742 1482 aa10.89□□□□□ -0.67
GYPB-206ENST00000506516 HSPA2P54652 639 aa10.89□□□□□ -0.67
GYPB-206ENST00000506516 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
GYPB-206ENST00000506516 ABCC3O15438 1527 aa10.89□□□□□ -0.67
GYPB-206ENST00000506516 LMTK3Q96Q04 1460 aa10.88□□□□□ -0.67
GYPB-206ENST00000506516 AKT1S1Q96B36 256 aa10.88□□□□□ -0.67
GYPB-206ENST00000506516 TNRQ92752 1358 aa10.88□□□□□ -0.67
GYPB-206ENST00000506516 SETD1BQ9UPS6 1966 aaKnown RBP10.87□□□□□ -0.67
GYPB-206ENST00000506516 ARHGAP31Q2M1Z3 1444 aa10.87□□□□□ -0.67
GYPB-206ENST00000506516 ZC3H13Q5T200 1668 aaKnown RBP10.87□□□□□ -0.67
GYPB-206ENST00000506516 PRDM15P57071 1507 aaPredicted RBP10.87□□□□□ -0.67
GYPB-206ENST00000506516 NUP155O75694 1391 aa10.87□□□□□ -0.67
GYPB-206ENST00000506516 MROH1Q8NDA8 1641 aa10.87□□□□□ -0.67
GYPB-206ENST00000506516 NAIPQ13075 1403 aa10.86□□□□□ -0.67
GYPB-206ENST00000506516 SPDYE2BA6NHP3 402 aa10.86□□□□□ -0.67
GYPB-206ENST00000506516 SPDYE6P0CI01 402 aa10.86□□□□□ -0.67
GYPB-206ENST00000506516 SPDYE2Q495Y8 402 aa10.86□□□□□ -0.67
GYPB-206ENST00000506516 ZNF692Q9BU19 519 aaPredicted RBP10.86□□□□□ -0.67
GYPB-206ENST00000506516 PREX1Q8TCU6 1659 aa10.85□□□□□ -0.67
GYPB-206ENST00000506516 ACIN1Q9UKV3 1341 aaKnown RBP10.85□□□□□ -0.67
GYPB-206ENST00000506516 HFM1A2PYH4 1435 aa10.85□□□□□ -0.67
GYPB-206ENST00000506516 DEPDC5O75140 1603 aa10.85□□□□□ -0.67
GYPB-206ENST00000506516 THEMISQ8N1K5 641 aaPredicted RBP10.85□□□□□ -0.67
GYPB-206ENST00000506516 TRIM52Q96A61 297 aa10.85□□□□□ -0.67
GYPB-206ENST00000506516 LMTK2Q8IWU2 1503 aa10.84□□□□□ -0.67
GYPB-206ENST00000506516 POTEHQ6S545 545 aa10.84□□□□□ -0.67
GYPB-206ENST00000506516 STAG3Q9UJ98 1225 aa10.83□□□□□ -0.68
GYPB-206ENST00000506516 VWDEQ8N2E2 1590 aa10.82□□□□□ -0.68
GYPB-206ENST00000506516 NLRP1Q9C000 1473 aa10.82□□□□□ -0.68
GYPB-206ENST00000506516 AMER1Q5JTC6 1135 aaPredicted RBP10.82□□□□□ -0.68
GYPB-206ENST00000506516 SLC52A1Q9NWF4 448 aa10.82□□□□□ -0.68
GYPB-206ENST00000506516 CAMSAP1Q5T5Y3 1602 aa10.82□□□□□ -0.68
GYPB-206ENST00000506516 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
GYPB-206ENST00000506516 ERVK-7P63135 1459 aa10.81□□□□□ -0.68
GYPB-206ENST00000506516 CEP152O94986 1710 aa10.81□□□□□ -0.68
GYPB-206ENST00000506516 PKD2Q13563 968 aa10.81□□□□□ -0.68
GYPB-206ENST00000506516 SPATA31D1Q6ZQQ2 1576 aa10.81□□□□□ -0.68
GYPB-206ENST00000506516 RPRD2Q5VT52 1461 aaKnown RBP10.81□□□□□ -0.68
GYPB-206ENST00000506516 IDI1Q13907 227 aa10.8□□□□□ -0.68
GYPB-206ENST00000506516 ANKLE2Q86XL3 938 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms