RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RRP7BPQ9NSQ0 103 aa21.13■□□□□ 0.97
SCLT1-208ENST00000506368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.12■□□□□ 0.97
SCLT1-208ENST00000506368 PNISRQ8TF01 805 aaKnown RBP21.12■□□□□ 0.97
SCLT1-208ENST00000506368 RRP1P56182 461 aaKnown RBP21.11■□□□□ 0.97
SCLT1-208ENST00000506368 PDE3BQ13370 1112 aa21.11■□□□□ 0.97
SCLT1-208ENST00000506368 NBPF8Q3BBV2 869 aa21.11■□□□□ 0.97
SCLT1-208ENST00000506368 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
SCLT1-208ENST00000506368 MBD5Q9P267 1494 aa21.1■□□□□ 0.97
SCLT1-208ENST00000506368 ABCA9Q8IUA7 1624 aa21.07■□□□□ 0.96
SCLT1-208ENST00000506368 GLI2P10070 1586 aa21.07■□□□□ 0.96
SCLT1-208ENST00000506368 GSE1Q14687 1217 aa21.06■□□□□ 0.96
SCLT1-208ENST00000506368 KIF15Q9NS87 1388 aa21.06■□□□□ 0.96
SCLT1-208ENST00000506368 MAP3K4Q9Y6R4 1608 aa21.06■□□□□ 0.96
SCLT1-208ENST00000506368 INSRP06213 1382 aa21.05■□□□□ 0.96
SCLT1-208ENST00000506368 KDM5CP41229 1560 aa21.05■□□□□ 0.96
SCLT1-208ENST00000506368 TMC1Q8TDI8 760 aa21.05■□□□□ 0.96
SCLT1-208ENST00000506368 ZMYM4Q5VZL5 1548 aa21.04■□□□□ 0.96
SCLT1-208ENST00000506368 DNMT1P26358 1616 aaKnown RBP21.03■□□□□ 0.96
SCLT1-208ENST00000506368 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
SCLT1-208ENST00000506368 BCORL1Q5H9F3 1711 aa21.03■□□□□ 0.96
SCLT1-208ENST00000506368 RALBP1Q15311 655 aa21.03■□□□□ 0.96
SCLT1-208ENST00000506368 USP47Q96K76 1375 aa21.02■□□□□ 0.96
SCLT1-208ENST00000506368 PPRC1Q5VV67 1664 aaKnown RBP21.02■□□□□ 0.96
SCLT1-208ENST00000506368 NPM2Q86SE8 214 aaKnown RBP21.01■□□□□ 0.95
SCLT1-208ENST00000506368 CDC42BPAQ5VT25 1732 aa21.01■□□□□ 0.95
SCLT1-208ENST00000506368 RCAN3Q9UKA8 241 aa21.01■□□□□ 0.95
SCLT1-208ENST00000506368 LAS1LQ9Y4W2 734 aaKnown RBP21■□□□□ 0.95
SCLT1-208ENST00000506368 DAPK1P53355 1430 aa21■□□□□ 0.95
SCLT1-208ENST00000506368 CHIC2Q9UKJ5 165 aa21■□□□□ 0.95
SCLT1-208ENST00000506368 MYO5CQ9NQX4 1742 aa20.99■□□□□ 0.95
SCLT1-208ENST00000506368 MYBBP1AQ9BQG0 1328 aaKnown RBP20.99■□□□□ 0.95
SCLT1-208ENST00000506368 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
SCLT1-208ENST00000506368 UHRF1BP1Q6BDS2 1440 aa20.97■□□□□ 0.95
SCLT1-208ENST00000506368 EXOC6Q8TAG9 804 aa20.97■□□□□ 0.95
SCLT1-208ENST00000506368 RTN4Q9NQC3 1192 aaKnown RBP20.97■□□□□ 0.95
SCLT1-208ENST00000506368 GPATCH8Q9UKJ3 1502 aaKnown RBP20.97■□□□□ 0.95
SCLT1-208ENST00000506368 RALGAPBQ86X10 1494 aa20.95■□□□□ 0.94
SCLT1-208ENST00000506368 E9PCH4 1651 aa20.94■□□□□ 0.94
SCLT1-208ENST00000506368 PREX2Q70Z35 1606 aa20.94■□□□□ 0.94
SCLT1-208ENST00000506368 PLCH2O75038 1416 aa20.94■□□□□ 0.94
SCLT1-208ENST00000506368 RSPH6AQ9H0K4 717 aa20.93■□□□□ 0.94
SCLT1-208ENST00000506368 PLEKHH2Q8IVE3 1493 aa20.93■□□□□ 0.94
SCLT1-208ENST00000506368 ARHGAP5Q13017 1502 aa20.93■□□□□ 0.94
SCLT1-208ENST00000506368 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
SCLT1-208ENST00000506368 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
SCLT1-208ENST00000506368 ZNF777Q9ULD5 760 aaPredicted RBP20.92■□□□□ 0.94
SCLT1-208ENST00000506368 NFKBIBQ15653 356 aa20.91■□□□□ 0.94
SCLT1-208ENST00000506368 ZNF644Q9H582 1327 aaPredicted RBP20.91■□□□□ 0.94
SCLT1-208ENST00000506368 DAXXQ9UER7 740 aaPredicted RBP20.9■□□□□ 0.94
SCLT1-208ENST00000506368 KIAA1107Q9UPP5 1409 aa20.9■□□□□ 0.94
SCLT1-208ENST00000506368 FANCAO15360 1455 aa20.9■□□□□ 0.94
SCLT1-208ENST00000506368 ABCC5O15440 1437 aa20.9■□□□□ 0.94
SCLT1-208ENST00000506368 PZPP20742 1482 aa20.9■□□□□ 0.94
SCLT1-208ENST00000506368 FAM43AQ8N2R8 423 aa20.89■□□□□ 0.93
SCLT1-208ENST00000506368 CFDP1Q9UEE9 299 aaPredicted RBP20.89■□□□□ 0.93
SCLT1-208ENST00000506368 ADGBQ8N7X0 1667 aa20.89■□□□□ 0.93
SCLT1-208ENST00000506368 FOXD1Q16676 465 aa20.89■□□□□ 0.93
SCLT1-208ENST00000506368 ITSN2Q9NZM3 1697 aa20.88■□□□□ 0.93
SCLT1-208ENST00000506368 NLRP13Q86W25 1043 aa20.85■□□□□ 0.93
SCLT1-208ENST00000506368 SAMD9LQ8IVG5 1584 aa20.85■□□□□ 0.93
SCLT1-208ENST00000506368 EFCAB2Q5VUJ9 269 aa20.85■□□□□ 0.93
SCLT1-208ENST00000506368 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.85■□□□□ 0.93
SCLT1-208ENST00000506368 BRPF3Q9ULD4 1205 aa20.84■□□□□ 0.93
SCLT1-208ENST00000506368 ARAP3Q8WWN8 1544 aa20.83■□□□□ 0.93
SCLT1-208ENST00000506368 COL17A1Q9UMD9 1497 aaPredicted RBP20.83■□□□□ 0.93
SCLT1-208ENST00000506368 ADGRL2O95490 1459 aa20.82■□□□□ 0.92
SCLT1-208ENST00000506368 PARD3Q8TEW0 1356 aa20.82■□□□□ 0.92
SCLT1-208ENST00000506368 FRAT1Q92837 279 aaPredicted RBP20.81■□□□□ 0.92
SCLT1-208ENST00000506368 ADGRL1O94910 1474 aa20.8■□□□□ 0.92
SCLT1-208ENST00000506368 NEO1Q92859 1461 aa20.8■□□□□ 0.92
SCLT1-208ENST00000506368 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.925e-10■■■■■ 36.7
SCLT1-208ENST00000506368 BLMP54132 1417 aaPredicted RBP20.8■□□□□ 0.92
SCLT1-208ENST00000506368 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
SCLT1-208ENST00000506368 CAMSAP2Q08AD1 1489 aa20.79■□□□□ 0.92
SCLT1-208ENST00000506368 RAPGEF3O95398 923 aa20.79■□□□□ 0.92
SCLT1-208ENST00000506368 CFAP74Q9C0B2 1584 aa20.79■□□□□ 0.92
SCLT1-208ENST00000506368 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
SCLT1-208ENST00000506368 SCAPERQ9BY12 1400 aa20.78■□□□□ 0.92
SCLT1-208ENST00000506368 ABCC1P33527 1531 aa20.78■□□□□ 0.92
SCLT1-208ENST00000506368 FAM161AQ3B820 660 aa20.77■□□□□ 0.92
SCLT1-208ENST00000506368 KDM2BQ8NHM5 1336 aa20.77■□□□□ 0.91
SCLT1-208ENST00000506368 POLR3GLQ9BT43 218 aa20.76■□□□□ 0.91
SCLT1-208ENST00000506368 CROCC2H7BZ55 1655 aa20.74■□□□□ 0.91
SCLT1-208ENST00000506368 TRAPPC8Q9Y2L5 1435 aa20.74■□□□□ 0.91
SCLT1-208ENST00000506368 AFAP1Q8N556 730 aa20.74■□□□□ 0.91
SCLT1-208ENST00000506368 CARD11Q9BXL7 1154 aa20.73■□□□□ 0.91
SCLT1-208ENST00000506368 FRMPD1Q5SYB0 1578 aa20.72■□□□□ 0.91
SCLT1-208ENST00000506368 RICTORQ6R327 1708 aa20.71■□□□□ 0.91
SCLT1-208ENST00000506368 KDM5DQ9BY66 1539 aa20.71■□□□□ 0.91
SCLT1-208ENST00000506368 CRBNQ96SW2 442 aa20.71■□□□□ 0.91
SCLT1-208ENST00000506368 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
SCLT1-208ENST00000506368 POGZQ7Z3K3 1410 aa20.68■□□□□ 0.9
SCLT1-208ENST00000506368 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.68■□□□□ 0.9
SCLT1-208ENST00000506368 VIRMAQ69YN4 1812 aaKnown RBP20.67■□□□□ 0.9
SCLT1-208ENST00000506368 LAMC1P11047 1609 aa20.67■□□□□ 0.9
SCLT1-208ENST00000506368 ANKRD30AQ9BXX3 1397 aa20.67■□□□□ 0.9
SCLT1-208ENST00000506368 GLIPR1L2Q4G1C9 344 aa20.66■□□□□ 0.9
SCLT1-208ENST00000506368 L1TD1Q5T7N2 865 aaKnown RBP20.66■□□□□ 0.9
SCLT1-208ENST00000506368 EIF3AQ14152 1382 aaKnown RBP20.66■□□□□ 0.9
SCLT1-208ENST00000506368 C8orf34Q49A92 452 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms