RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 ZNF335Q9H4Z2 1342 aaPredicted RBP18.03■□□□□ 0.48
SIL1-208ENST00000505945 WASHC2CQ9Y4E1 1318 aa18.03■□□□□ 0.48
SIL1-208ENST00000505945 PLA2R1Q13018 1463 aa18.02■□□□□ 0.48
SIL1-208ENST00000505945 TCOF1Q13428 1488 aaKnown RBP18.01■□□□□ 0.47
SIL1-208ENST00000505945 ARHGEF5Q12774 1597 aa18■□□□□ 0.47
SIL1-208ENST00000505945 A2ML1A8K2U0 1454 aa18■□□□□ 0.47
SIL1-208ENST00000505945 TNRQ92752 1358 aa17.99■□□□□ 0.47
SIL1-208ENST00000505945 KDM5DQ9BY66 1539 aa17.98■□□□□ 0.47
SIL1-208ENST00000505945 DNMT1P26358 1616 aaKnown RBP17.98■□□□□ 0.47
SIL1-208ENST00000505945 PZPP20742 1482 aa17.97■□□□□ 0.47
SIL1-208ENST00000505945 IQSEC2Q5JU85 1478 aa17.97■□□□□ 0.47
SIL1-208ENST00000505945 MAP3K1Q13233 1512 aa17.95■□□□□ 0.46
SIL1-208ENST00000505945 FAM135AQ9P2D6 1515 aa17.94■□□□□ 0.46
SIL1-208ENST00000505945 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
SIL1-208ENST00000505945 MYOM3Q5VTT5 1437 aa17.93■□□□□ 0.46
SIL1-208ENST00000505945 MIA2Q96PC5 1412 aa17.93■□□□□ 0.46
SIL1-208ENST00000505945 UBAP1LF5GYI3 381 aa17.92■□□□□ 0.46
SIL1-208ENST00000505945 THEMISQ8N1K5 641 aaPredicted RBP17.92■□□□□ 0.46
SIL1-208ENST00000505945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.91■□□□□ 0.46
SIL1-208ENST00000505945 MAST1Q9Y2H9 1570 aa17.91■□□□□ 0.46
SIL1-208ENST00000505945 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
SIL1-208ENST00000505945 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
SIL1-208ENST00000505945 RNF17Q9BXT8 1623 aaKnown RBP17.88■□□□□ 0.45
SIL1-208ENST00000505945 APLP2Q06481 763 aa17.88■□□□□ 0.45
SIL1-208ENST00000505945 ABCC3O15438 1527 aa17.88■□□□□ 0.45
SIL1-208ENST00000505945 NEURL4Q96JN8 1562 aa17.87■□□□□ 0.45
SIL1-208ENST00000505945 ILDR2Q71H61 639 aa17.87■□□□□ 0.45
SIL1-208ENST00000505945 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
SIL1-208ENST00000505945 POLR1AO95602 1720 aaPredicted RBP17.86■□□□□ 0.45
SIL1-208ENST00000505945 RRP7BPQ9NSQ0 103 aa17.85■□□□□ 0.45
SIL1-208ENST00000505945 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
SIL1-208ENST00000505945 MROH1Q8NDA8 1641 aa17.83■□□□□ 0.45
SIL1-208ENST00000505945 SHANK2Q9UPX8 1470 aa17.83■□□□□ 0.45
SIL1-208ENST00000505945 ABCC5O15440 1437 aa17.83■□□□□ 0.45
SIL1-208ENST00000505945 ZC3H13Q5T200 1668 aaKnown RBP17.83■□□□□ 0.44
SIL1-208ENST00000505945 DUOX2Q9NRD8 1548 aa17.82■□□□□ 0.44
SIL1-208ENST00000505945 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
SIL1-208ENST00000505945 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
SIL1-208ENST00000505945 SPATA31D1Q6ZQQ2 1576 aa17.82■□□□□ 0.44
SIL1-208ENST00000505945 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
SIL1-208ENST00000505945 NPHP4O75161 1426 aaPredicted RBP17.81■□□□□ 0.44
SIL1-208ENST00000505945 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
SIL1-208ENST00000505945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.8■□□□□ 0.44
SIL1-208ENST00000505945 CPS1P31327 1500 aa17.8■□□□□ 0.44
SIL1-208ENST00000505945 CEP152O94986 1710 aa17.8■□□□□ 0.44
SIL1-208ENST00000505945 MED14O60244 1454 aa17.8■□□□□ 0.44
SIL1-208ENST00000505945 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
SIL1-208ENST00000505945 PIP4K2BP78356 416 aa17.79■□□□□ 0.44
SIL1-208ENST00000505945 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
SIL1-208ENST00000505945 TOM1O60784 492 aa17.78■□□□□ 0.44
SIL1-208ENST00000505945 CHIC2Q9UKJ5 165 aa17.78■□□□□ 0.44
SIL1-208ENST00000505945 VWDEQ8N2E2 1590 aa17.78■□□□□ 0.44
SIL1-208ENST00000505945 DAPK1P53355 1430 aa17.77■□□□□ 0.44
SIL1-208ENST00000505945 FGD6Q6ZV73 1430 aa17.77■□□□□ 0.44
SIL1-208ENST00000505945 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
SIL1-208ENST00000505945 CROCC2H7BZ55 1655 aa17.76■□□□□ 0.43
SIL1-208ENST00000505945 IQGAP1P46940 1657 aa17.74■□□□□ 0.43
SIL1-208ENST00000505945 HSPA1LP34931 641 aa17.74■□□□□ 0.43
SIL1-208ENST00000505945 ARHGAP31Q2M1Z3 1444 aa17.73■□□□□ 0.43
SIL1-208ENST00000505945 PRDM15P57071 1507 aaPredicted RBP17.73■□□□□ 0.43
SIL1-208ENST00000505945 SOCS7O14512 581 aa17.73■□□□□ 0.43
SIL1-208ENST00000505945 LTKP29376 864 aa17.73■□□□□ 0.43
SIL1-208ENST00000505945 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
SIL1-208ENST00000505945 ANKRD30AQ9BXX3 1397 aa17.72■□□□□ 0.43
SIL1-208ENST00000505945 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
SIL1-208ENST00000505945 KANK1Q14678 1352 aa17.71■□□□□ 0.43
SIL1-208ENST00000505945 SCAF11Q99590 1463 aaKnown RBP17.69■□□□□ 0.42
SIL1-208ENST00000505945 STRCP1A6NGW2 1772 aa17.69■□□□□ 0.42
SIL1-208ENST00000505945 FAM50AQ14320 339 aaKnown RBP17.68■□□□□ 0.42
SIL1-208ENST00000505945 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
SIL1-208ENST00000505945 EID1Q9Y6B2 187 aa17.68■□□□□ 0.42
SIL1-208ENST00000505945 ARHGAP23Q9P227 1491 aa17.68■□□□□ 0.42
SIL1-208ENST00000505945 LRRC7Q96NW7 1537 aa17.67■□□□□ 0.42
SIL1-208ENST00000505945 IDI1Q13907 227 aa17.67■□□□□ 0.42
SIL1-208ENST00000505945 SLIT1O75093 1534 aa17.67■□□□□ 0.42
SIL1-208ENST00000505945 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
SIL1-208ENST00000505945 PIK3C2BO00750 1634 aa17.65■□□□□ 0.42
SIL1-208ENST00000505945 SENP3Q9H4L4 574 aaPredicted RBP17.64■□□□□ 0.41
SIL1-208ENST00000505945 TMEM2Q9UHN6 1383 aa17.64■□□□□ 0.41
SIL1-208ENST00000505945 LMTK2Q8IWU2 1503 aa17.63■□□□□ 0.41
SIL1-208ENST00000505945 ADGRL2O95490 1459 aa17.62■□□□□ 0.41
SIL1-208ENST00000505945 SYNMO15061 1565 aa17.6■□□□□ 0.41
SIL1-208ENST00000505945 EFCAB6Q5THR3 1501 aa17.59■□□□□ 0.41
SIL1-208ENST00000505945 NOS1P29475 1434 aa17.59■□□□□ 0.41
SIL1-208ENST00000505945 ANKRD50Q9ULJ7 1429 aa17.58■□□□□ 0.41
SIL1-208ENST00000505945 SLC26A8Q96RN1 970 aa17.58■□□□□ 0.4
SIL1-208ENST00000505945 MED1Q15648 1581 aaPredicted RBP17.57■□□□□ 0.4
SIL1-208ENST00000505945 SLC52A1Q9NWF4 448 aa17.57■□□□□ 0.4
SIL1-208ENST00000505945 KDM5AP29375 1690 aaKnown RBP17.56■□□□□ 0.4
SIL1-208ENST00000505945 KCNA6P17658 529 aa17.54■□□□□ 0.4
SIL1-208ENST00000505945 XIRP1Q702N8 1843 aaKnown RBP17.54■□□□□ 0.4
SIL1-208ENST00000505945 RBM33Q96EV2 1170 aaKnown RBP17.53■□□□□ 0.4
SIL1-208ENST00000505945 BCANQ96GW7 911 aa17.53■□□□□ 0.4
SIL1-208ENST00000505945 TET3O43151 1660 aa17.52■□□□□ 0.4
SIL1-208ENST00000505945 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
SIL1-208ENST00000505945 TMEM94Q12767 1356 aa17.52■□□□□ 0.39
SIL1-208ENST00000505945 ADGRB3O60242 1522 aa17.52■□□□□ 0.39
SIL1-208ENST00000505945 RPRD2Q5VT52 1461 aaKnown RBP17.51■□□□□ 0.39
SIL1-208ENST00000505945 PHF23Q9BUL5 403 aaPredicted RBP17.51■□□□□ 0.39
SIL1-208ENST00000505945 PPARGC1BQ86YN6 1023 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms