RNA–Protein interactions for RNA: ENST00000505881.5

CPNE4-205, Transcript of copine 4, humanhuman

TSL 4

Gene CPNE4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-205ENST00000505881 ARIH1Q9Y4X5 557 aaPredicted RBP8.27□□□□□ -1.09
CPNE4-205ENST00000505881 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
CPNE4-205ENST00000505881 TDRD9Q8NDG6 1382 aaKnown RBP8.25□□□□□ -1.09
CPNE4-205ENST00000505881 DNMBPQ6XZF7 1577 aa8.25□□□□□ -1.09
CPNE4-205ENST00000505881 SCUBE2Q9NQ36 999 aa8.24□□□□□ -1.09
CPNE4-205ENST00000505881 ABCC8Q09428 1581 aa8.23□□□□□ -1.09
CPNE4-205ENST00000505881 MAMSTRQ6ZN01 415 aa8.23□□□□□ -1.09
CPNE4-205ENST00000505881 RAD54L2Q9Y4B4 1467 aa8.22□□□□□ -1.09
CPNE4-205ENST00000505881 PRKCSHP14314 528 aaPredicted RBP8.22□□□□□ -1.09
CPNE4-205ENST00000505881 ARXQ96QS3 562 aa8.22□□□□□ -1.09
CPNE4-205ENST00000505881 ABCC10Q5T3U5 1492 aa8.21□□□□□ -1.09
CPNE4-205ENST00000505881 DPYSL4O14531 572 aa8.21□□□□□ -1.1
CPNE4-205ENST00000505881 POLA1P09884 1462 aaPredicted RBP8.2□□□□□ -1.1
CPNE4-205ENST00000505881 MAGI1Q96QZ7 1491 aaPredicted RBP8.2□□□□□ -1.1
CPNE4-205ENST00000505881 DIP2BQ9P265 1576 aa8.19□□□□□ -1.1
CPNE4-205ENST00000505881 PDIA6Q15084 440 aa8.19□□□□□ -1.1
CPNE4-205ENST00000505881 SLAIN1Q8ND83 568 aa8.19□□□□□ -1.1
CPNE4-205ENST00000505881 OXER1Q8TDS5 423 aa8.19□□□□□ -1.1
CPNE4-205ENST00000505881 UPF1Q92900 1129 aaKnown RBP eCLIP8.19□□□□□ -1.1
CPNE4-205ENST00000505881 SEMA3EO15041 775 aa8.18□□□□□ -1.1
CPNE4-205ENST00000505881 SLC34A2O95436 690 aa8.18□□□□□ -1.1
CPNE4-205ENST00000505881 PTCD2Q8WV60 388 aaKnown RBP8.17□□□□□ -1.1
CPNE4-205ENST00000505881 CEP170Q5SW79 1584 aa8.17□□□□□ -1.1
CPNE4-205ENST00000505881 TESPA1A2RU30 521 aaPredicted RBP8.16□□□□□ -1.1
CPNE4-205ENST00000505881 SPDYE16A6NNV3 312 aaPredicted RBP8.16□□□□□ -1.1
CPNE4-205ENST00000505881 SOGA1O94964 1423 aa8.16□□□□□ -1.1
CPNE4-205ENST00000505881 MAP3K9P80192 1104 aa8.15□□□□□ -1.1
CPNE4-205ENST00000505881 LHX8Q68G74 356 aa8.15□□□□□ -1.1
CPNE4-205ENST00000505881 PBRM1Q86U86 1689 aa8.14□□□□□ -1.11
CPNE4-205ENST00000505881 GRIN2BQ13224 1484 aa8.14□□□□□ -1.11
CPNE4-205ENST00000505881 OTUD5Q96G74 571 aa8.13□□□□□ -1.11
CPNE4-205ENST00000505881 WDR97A6NE52 1622 aa8.13□□□□□ -1.11
CPNE4-205ENST00000505881 TOP2AP11388 1531 aaKnown RBP8.13□□□□□ -1.11
CPNE4-205ENST00000505881 TULP1O00294 542 aaPredicted RBP8.12□□□□□ -1.11
CPNE4-205ENST00000505881 HOXB3P14651 431 aaPredicted RBP8.12□□□□□ -1.11
CPNE4-205ENST00000505881 DOK7Q18PE1 504 aa8.12□□□□□ -1.11
CPNE4-205ENST00000505881 SPATA31D1Q6ZQQ2 1576 aa8.12□□□□□ -1.11
CPNE4-205ENST00000505881 TBC1D12O60347 775 aa8.11□□□□□ -1.11
CPNE4-205ENST00000505881 MLLT3P42568 568 aaPredicted RBP8.11□□□□□ -1.11
CPNE4-205ENST00000505881 PCDHGA4Q9Y5G9 962 aa8.11□□□□□ -1.11
CPNE4-205ENST00000505881 MAPKBP1O60336 1514 aa8.11□□□□□ -1.11
CPNE4-205ENST00000505881 ZNF316A6NFI3 1004 aaPredicted RBP8.1□□□□□ -1.11
CPNE4-205ENST00000505881 EVI5O60447 810 aa8.1□□□□□ -1.11
CPNE4-205ENST00000505881 LMOD2Q6P5Q4 547 aa8.1□□□□□ -1.11
CPNE4-205ENST00000505881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.1□□□□□ -1.11
CPNE4-205ENST00000505881 SHROOM2Q13796 1616 aa8.1□□□□□ -1.11
CPNE4-205ENST00000505881 SMYD5Q6GMV2 418 aa8.09□□□□□ -1.11
CPNE4-205ENST00000505881 RIMBP2O15034 1052 aa8.08□□□□□ -1.12
CPNE4-205ENST00000505881 TPRNQ4KMQ1 711 aa8.08□□□□□ -1.12
CPNE4-205ENST00000505881 TOP2BQ02880 1626 aa8.07□□□□□ -1.12
CPNE4-205ENST00000505881 FGD5Q6ZNL6 1462 aa8.07□□□□□ -1.12
CPNE4-205ENST00000505881 PTGER2P43116 358 aa8.07□□□□□ -1.12
CPNE4-205ENST00000505881 ZSWIM6Q9HCJ5 1215 aa8.07□□□□□ -1.12
CPNE4-205ENST00000505881 PPRC1Q5VV67 1664 aaKnown RBP8.07□□□□□ -1.12
CPNE4-205ENST00000505881 CCDC88BA6NC98 1476 aa8.06□□□□□ -1.12
CPNE4-205ENST00000505881 SNPHO15079 494 aa8.06□□□□□ -1.12
CPNE4-205ENST00000505881 ANO8Q9HCE9 1232 aaPredicted RBP8.06□□□□□ -1.12
CPNE4-205ENST00000505881 ADCY10Q96PN6 1610 aa8.06□□□□□ -1.12
CPNE4-205ENST00000505881 ZNF710Q8N1W2 664 aa8.05□□□□□ -1.12
CPNE4-205ENST00000505881 GRIN2AQ12879 1464 aa8.05□□□□□ -1.12
CPNE4-205ENST00000505881 PRG4Q92954 1404 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-205ENST00000505881 GRXCR2A6NFK2 248 aa8.04□□□□□ -1.12
CPNE4-205ENST00000505881 ARSIQ5FYB1 569 aa8.04□□□□□ -1.12
CPNE4-205ENST00000505881 GPR153Q6NV75 609 aa8.04□□□□□ -1.12
CPNE4-205ENST00000505881 CERKQ8TCT0 537 aa8.04□□□□□ -1.12
CPNE4-205ENST00000505881 DDX12PQ92771 950 aa8.04□□□□□ -1.12
CPNE4-205ENST00000505881 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
CPNE4-205ENST00000505881 NUDT7P0C024 238 aa8.03□□□□□ -1.12
CPNE4-205ENST00000505881 KHSRPQ92945 711 aaKnown RBP eCLIP8.03□□□□□ -1.12
CPNE4-205ENST00000505881 NUP160Q12769 1436 aa8.03□□□□□ -1.12
CPNE4-205ENST00000505881 RBM26Q5T8P6 1007 aaKnown RBP8.02□□□□□ -1.13
CPNE4-205ENST00000505881 OSBPP22059 807 aa8.01□□□□□ -1.13
CPNE4-205ENST00000505881 RANGAP1P46060 587 aaPredicted RBP8□□□□□ -1.13
CPNE4-205ENST00000505881 PHF14O94880 888 aa7.99□□□□□ -1.13
CPNE4-205ENST00000505881 HOXB1P14653 301 aaPredicted RBP7.99□□□□□ -1.13
CPNE4-205ENST00000505881 GPIHBP1Q8IV16 184 aa7.99□□□□□ -1.13
CPNE4-205ENST00000505881 JPH4Q96JJ6 628 aa7.99□□□□□ -1.13
CPNE4-205ENST00000505881 ABCA5Q8WWZ7 1642 aa7.99□□□□□ -1.13
CPNE4-205ENST00000505881 PRIM1P49642 420 aaKnown RBP7.98□□□□□ -1.13
CPNE4-205ENST00000505881 ZC3H15Q8WU90 426 aaKnown RBP7.98□□□□□ -1.13
CPNE4-205ENST00000505881 EPAS1Q99814 870 aa7.98□□□□□ -1.13
CPNE4-205ENST00000505881 PCDHGA10Q9Y5H3 936 aa7.98□□□□□ -1.13
CPNE4-205ENST00000505881 ADAMTS12P58397 1594 aa7.97□□□□□ -1.13
CPNE4-205ENST00000505881 FOSBP53539 338 aa7.97□□□□□ -1.13
CPNE4-205ENST00000505881 TIMELESSQ9UNS1 1208 aa7.97□□□□□ -1.13
CPNE4-205ENST00000505881 KIF21BO75037 1637 aa7.96□□□□□ -1.13
CPNE4-205ENST00000505881 EN1Q05925 392 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-205ENST00000505881 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
CPNE4-205ENST00000505881 LHX6Q9UPM6 363 aa7.96□□□□□ -1.14
CPNE4-205ENST00000505881 CUX1P39880 1505 aa7.96□□□□□ -1.14
CPNE4-205ENST00000505881 PCF11O94913 1555 aaKnown RBP7.96□□□□□ -1.14
CPNE4-205ENST00000505881 GPR37O15354 613 aa7.95□□□□□ -1.14
CPNE4-205ENST00000505881 ZNF454Q8N9F8 522 aa7.95□□□□□ -1.14
CPNE4-205ENST00000505881 FBXW7Q969H0 707 aa7.95□□□□□ -1.14
CPNE4-205ENST00000505881 PTPRMP28827 1452 aa7.94□□□□□ -1.14
CPNE4-205ENST00000505881 GLI2P10070 1586 aa7.94□□□□□ -1.14
CPNE4-205ENST00000505881 NUTM2FA1L443 756 aa7.93□□□□□ -1.14
CPNE4-205ENST00000505881 MAP3K7O43318 606 aa7.93□□□□□ -1.14
CPNE4-205ENST00000505881 HSPA2P54652 639 aa7.93□□□□□ -1.14
CPNE4-205ENST00000505881 HOMEZQ8IX15 550 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms