RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
LETM1-203ENST00000505551 MIA2Q96PC5 1412 aa17.59■□□□□ 0.41
LETM1-203ENST00000505551 TCOF1Q13428 1488 aaKnown RBP17.59■□□□□ 0.41
LETM1-203ENST00000505551 ABCC5O15440 1437 aa17.57■□□□□ 0.4
LETM1-203ENST00000505551 DAPK1P53355 1430 aa17.56■□□□□ 0.4
LETM1-203ENST00000505551 ATP10BO94823 1461 aa17.56■□□□□ 0.4
LETM1-203ENST00000505551 KIF14Q15058 1648 aa17.55■□□□□ 0.4
LETM1-203ENST00000505551 HNRNPMP52272 730 aaKnown RBP eCLIP17.55■□□□□ 0.45e-9■■■■■ 34.7
LETM1-203ENST00000505551 SLC4A1APQ9BWU0 796 aaKnown RBP17.54■□□□□ 0.4
LETM1-203ENST00000505551 GPATCH8Q9UKJ3 1502 aaKnown RBP17.53■□□□□ 0.4
LETM1-203ENST00000505551 DCAF11Q8TEB1 546 aa17.52■□□□□ 0.4
LETM1-203ENST00000505551 SAMD1Q6SPF0 538 aaPredicted RBP17.5■□□□□ 0.39
LETM1-203ENST00000505551 CHD1O14646 1710 aa17.49■□□□□ 0.39
LETM1-203ENST00000505551 RRP1P56182 461 aaKnown RBP17.49■□□□□ 0.39
LETM1-203ENST00000505551 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
LETM1-203ENST00000505551 EXOC6Q8TAG9 804 aa17.49■□□□□ 0.39
LETM1-203ENST00000505551 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
LETM1-203ENST00000505551 DENND4BO75064 1496 aaPredicted RBP17.48■□□□□ 0.39
LETM1-203ENST00000505551 L3MBTL2Q969R5 705 aa17.46■□□□□ 0.39
LETM1-203ENST00000505551 KIF7Q2M1P5 1343 aa17.46■□□□□ 0.39
LETM1-203ENST00000505551 ABCA8O94911 1581 aa17.46■□□□□ 0.39
LETM1-203ENST00000505551 DHX29Q7Z478 1369 aaKnown RBP17.45■□□□□ 0.38
LETM1-203ENST00000505551 BRD2P25440 801 aaKnown RBP17.45■□□□□ 0.38
LETM1-203ENST00000505551 TSPY4P0CV99 314 aa17.44■□□□□ 0.38
LETM1-203ENST00000505551 TSPY10P0CW01 314 aa17.44■□□□□ 0.38
LETM1-203ENST00000505551 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
LETM1-203ENST00000505551 RRAGDQ9NQL2 400 aaPredicted RBP17.43■□□□□ 0.38
LETM1-203ENST00000505551 C14orf37Q86TY3 774 aa17.42■□□□□ 0.38
LETM1-203ENST00000505551 ZNF326Q5BKZ1 582 aaKnown RBP17.41■□□□□ 0.38
LETM1-203ENST00000505551 FRAT2O75474 233 aaPredicted RBP17.41■□□□□ 0.38
LETM1-203ENST00000505551 ROCK1Q13464 1354 aa17.41■□□□□ 0.38
LETM1-203ENST00000505551 DNMT1P26358 1616 aaKnown RBP17.4■□□□□ 0.38
LETM1-203ENST00000505551 SLC4A3P48751 1232 aa17.4■□□□□ 0.38
LETM1-203ENST00000505551 PKD2Q13563 968 aa17.4■□□□□ 0.38
LETM1-203ENST00000505551 RRP9O43818 475 aaKnown RBP17.39■□□□□ 0.37
LETM1-203ENST00000505551 PNISRQ8TF01 805 aaKnown RBP17.39■□□□□ 0.37
LETM1-203ENST00000505551 GCC2Q8IWJ2 1684 aa17.38■□□□□ 0.37
LETM1-203ENST00000505551 ANKRD30AQ9BXX3 1397 aa17.37■□□□□ 0.37
LETM1-203ENST00000505551 ABCC10Q5T3U5 1492 aa17.37■□□□□ 0.37
LETM1-203ENST00000505551 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
LETM1-203ENST00000505551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.372e-8■■■□□ 14.9
LETM1-203ENST00000505551 RCAN3Q9UKA8 241 aa17.36■□□□□ 0.37
LETM1-203ENST00000505551 NBPF8Q3BBV2 869 aa17.35■□□□□ 0.37
LETM1-203ENST00000505551 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
LETM1-203ENST00000505551 HSP90AA2PQ14568 343 aaPredicted RBP17.35■□□□□ 0.37
LETM1-203ENST00000505551 NUP155O75694 1391 aa17.34■□□□□ 0.37
LETM1-203ENST00000505551 ANKRD50Q9ULJ7 1429 aa17.33■□□□□ 0.37
LETM1-203ENST00000505551 C9orf84Q5VXU9 1444 aa17.33■□□□□ 0.36
LETM1-203ENST00000505551 RSPH4AQ5TD94 716 aa17.33■□□□□ 0.36
LETM1-203ENST00000505551 CDC42BPAQ5VT25 1732 aa17.32■□□□□ 0.36
LETM1-203ENST00000505551 ITSN2Q9NZM3 1697 aa17.31■□□□□ 0.36
LETM1-203ENST00000505551 TEX14Q8IWB6 1497 aa17.31■□□□□ 0.36
LETM1-203ENST00000505551 CNGB1Q14028 1251 aaPredicted RBP17.3■□□□□ 0.36
LETM1-203ENST00000505551 L1TD1Q5T7N2 865 aaKnown RBP17.3■□□□□ 0.36
LETM1-203ENST00000505551 NAP1L5Q96NT1 182 aaPredicted RBP17.3■□□□□ 0.36
LETM1-203ENST00000505551 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
LETM1-203ENST00000505551 ADCY10Q96PN6 1610 aa17.29■□□□□ 0.36
LETM1-203ENST00000505551 KIF15Q9NS87 1388 aa17.29■□□□□ 0.36
LETM1-203ENST00000505551 HSP90AA1P07900 732 aaKnown RBP17.29■□□□□ 0.36
LETM1-203ENST00000505551 SENP3-EIF4A1A0A087X0R7 540 aa17.28■□□□□ 0.36
LETM1-203ENST00000505551 SKAP1Q86WV1 359 aa17.28■□□□□ 0.36
LETM1-203ENST00000505551 PZPP20742 1482 aa17.28■□□□□ 0.36
LETM1-203ENST00000505551 CLCN1P35523 988 aa17.27■□□□□ 0.36
LETM1-203ENST00000505551 POLR3GLQ9BT43 218 aa17.27■□□□□ 0.36
LETM1-203ENST00000505551 POGKQ9P215 609 aa17.27■□□□□ 0.36
LETM1-203ENST00000505551 RPRD2Q5VT52 1461 aaKnown RBP17.27■□□□□ 0.35
LETM1-203ENST00000505551 PNNQ9H307 717 aaKnown RBP17.27■□□□□ 0.35
LETM1-203ENST00000505551 BCORL1Q5H9F3 1711 aa17.26■□□□□ 0.35
LETM1-203ENST00000505551 TMC1Q8TDI8 760 aa17.26■□□□□ 0.35
LETM1-203ENST00000505551 TAOK2Q9UL54 1235 aa17.26■□□□□ 0.35
LETM1-203ENST00000505551 ARHGAP5Q13017 1502 aa17.26■□□□□ 0.35
LETM1-203ENST00000505551 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
LETM1-203ENST00000505551 FAM161AQ3B820 660 aa17.25■□□□□ 0.35
LETM1-203ENST00000505551 C8orf34Q49A92 452 aa17.25■□□□□ 0.35
LETM1-203ENST00000505551 KDM2BQ8NHM5 1336 aa17.24■□□□□ 0.35
LETM1-203ENST00000505551 MBD5Q9P267 1494 aa17.24■□□□□ 0.35
LETM1-203ENST00000505551 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
LETM1-203ENST00000505551 BRD4O60885 1362 aaPredicted RBP17.24■□□□□ 0.35
LETM1-203ENST00000505551 KTN1Q86UP2 1357 aaKnown RBP17.23■□□□□ 0.35
LETM1-203ENST00000505551 NAP1L2Q9ULW6 460 aaPredicted RBP17.23■□□□□ 0.35
LETM1-203ENST00000505551 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
LETM1-203ENST00000505551 ABCC2Q92887 1545 aa17.23■□□□□ 0.35
LETM1-203ENST00000505551 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
LETM1-203ENST00000505551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.22■□□□□ 0.35
LETM1-203ENST00000505551 RGL3Q3MIN7 710 aa17.22■□□□□ 0.35
LETM1-203ENST00000505551 AFAP1Q8N556 730 aa17.22■□□□□ 0.35
LETM1-203ENST00000505551 ADGRL2O95490 1459 aa17.22■□□□□ 0.35
LETM1-203ENST00000505551 SAMD9LQ8IVG5 1584 aa17.21■□□□□ 0.35
LETM1-203ENST00000505551 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
LETM1-203ENST00000505551 SYCP2Q9BX26 1530 aa17.21■□□□□ 0.35
LETM1-203ENST00000505551 KIAA1107Q9UPP5 1409 aa17.21■□□□□ 0.34
LETM1-203ENST00000505551 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
LETM1-203ENST00000505551 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
LETM1-203ENST00000505551 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
LETM1-203ENST00000505551 CCDC141Q6ZP82 1450 aa17.18■□□□□ 0.34
LETM1-203ENST00000505551 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
LETM1-203ENST00000505551 VIRMAQ69YN4 1812 aaKnown RBP17.18■□□□□ 0.34
LETM1-203ENST00000505551 ROCK2O75116 1388 aaKnown RBP17.18■□□□□ 0.34
LETM1-203ENST00000505551 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
LETM1-203ENST00000505551 CENPQQ7L2Z9 268 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms