RNA–Protein interactions for RNA: ENST00000505450.5

PROM1-206, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,349 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-206ENST00000505450 ROCK2O75116 1388 aaKnown RBP10.33□□□□□ -0.76
PROM1-206ENST00000505450 FRAT2O75474 233 aaPredicted RBP10.33□□□□□ -0.76
PROM1-206ENST00000505450 HNRNPMP52272 730 aaKnown RBP eCLIP10.32□□□□□ -0.76
PROM1-206ENST00000505450 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
PROM1-206ENST00000505450 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
PROM1-206ENST00000505450 CCDC146Q8IYE0 955 aa10.32□□□□□ -0.76
PROM1-206ENST00000505450 PANK3Q9H999 370 aa10.32□□□□□ -0.76
PROM1-206ENST00000505450 FAM161AQ3B820 660 aa10.31□□□□□ -0.76
PROM1-206ENST00000505450 HSP90AA1P07900 732 aaKnown RBP10.31□□□□□ -0.76
PROM1-206ENST00000505450 PIP4K2BP78356 416 aa10.3□□□□□ -0.76
PROM1-206ENST00000505450 TNNT2P45379 298 aaPredicted RBP10.3□□□□□ -0.76
PROM1-206ENST00000505450 GLIPR1L2Q4G1C9 344 aa10.3□□□□□ -0.76
PROM1-206ENST00000505450 TMF1P82094 1093 aa10.29□□□□□ -0.76
PROM1-206ENST00000505450 PTPN23Q9H3S7 1636 aa10.29□□□□□ -0.76
PROM1-206ENST00000505450 WASHC2CQ9Y4E1 1318 aa10.29□□□□□ -0.76
PROM1-206ENST00000505450 SPAG9O60271 1321 aaKnown RBP10.29□□□□□ -0.76
PROM1-206ENST00000505450 GOLGA2Q08379 1002 aa10.29□□□□□ -0.76
PROM1-206ENST00000505450 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
PROM1-206ENST00000505450 CENPQQ7L2Z9 268 aaPredicted RBP10.28□□□□□ -0.76
PROM1-206ENST00000505450 URB2Q14146 1524 aaKnown RBP10.28□□□□□ -0.76
PROM1-206ENST00000505450 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
PROM1-206ENST00000505450 BRD4O60885 1362 aaPredicted RBP10.27□□□□□ -0.77
PROM1-206ENST00000505450 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
PROM1-206ENST00000505450 ADAMTS8Q9UP79 889 aa10.26□□□□□ -0.77
PROM1-206ENST00000505450 ANKRD30AQ9BXX3 1397 aa10.25□□□□□ -0.77
PROM1-206ENST00000505450 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
PROM1-206ENST00000505450 CLUAP1Q96AJ1 413 aa10.25□□□□□ -0.77
PROM1-206ENST00000505450 CCDC9Q9Y3X0 531 aaKnown RBP10.25□□□□□ -0.77
PROM1-206ENST00000505450 AFAP1Q8N556 730 aa10.24□□□□□ -0.77
PROM1-206ENST00000505450 EID1Q9Y6B2 187 aa10.24□□□□□ -0.77
PROM1-206ENST00000505450 TRIM44Q96DX7 344 aaPredicted RBP10.24□□□□□ -0.77
PROM1-206ENST00000505450 APAF1O14727 1248 aa10.23□□□□□ -0.77
PROM1-206ENST00000505450 HSPA2P54652 639 aa10.23□□□□□ -0.77
PROM1-206ENST00000505450 COG6Q9Y2V7 657 aa10.23□□□□□ -0.77
PROM1-206ENST00000505450 L1TD1Q5T7N2 865 aaKnown RBP10.23□□□□□ -0.77
PROM1-206ENST00000505450 PNNQ9H307 717 aaKnown RBP10.23□□□□□ -0.77
PROM1-206ENST00000505450 EFCAB5A4FU69 1503 aa10.22□□□□□ -0.77
PROM1-206ENST00000505450 BCL2L13Q9BXK5 485 aa10.22□□□□□ -0.77
PROM1-206ENST00000505450 CEBPAP49715 358 aaPredicted RBP10.21□□□□□ -0.77
PROM1-206ENST00000505450 RSPH6AQ9H0K4 717 aa10.21□□□□□ -0.77
PROM1-206ENST00000505450 ANP32BQ92688 251 aaKnown RBP10.21□□□□□ -0.78
PROM1-206ENST00000505450 NUTM2FA1L443 756 aa10.2□□□□□ -0.78
PROM1-206ENST00000505450 HDGFP51858 240 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 SAFB2Q14151 953 aaKnown RBP eCLIP10.2□□□□□ -0.78
PROM1-206ENST00000505450 MEX3CQ5U5Q3 659 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 RRP7AQ9Y3A4 280 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 RNF123Q5XPI4 1314 aa10.2□□□□□ -0.78
PROM1-206ENST00000505450 RPRD2Q5VT52 1461 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 POGKQ9P215 609 aa10.2□□□□□ -0.78
PROM1-206ENST00000505450 DHX29Q7Z478 1369 aaKnown RBP10.2□□□□□ -0.78
PROM1-206ENST00000505450 GOLGA6L3A6NEY3 463 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 BCAR3O75815 825 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 CDCA8Q53HL2 280 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 EHBP1L1Q8N3D4 1523 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 MFAP1P55081 439 aaKnown RBP10.19□□□□□ -0.78
PROM1-206ENST00000505450 CDK13Q14004 1512 aaKnown RBP10.19□□□□□ -0.78
PROM1-206ENST00000505450 SUPT6HQ7KZ85 1726 aaKnown RBP10.19□□□□□ -0.78
PROM1-206ENST00000505450 SYNJ2O15056 1496 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
PROM1-206ENST00000505450 MIA2Q96PC5 1412 aa10.18□□□□□ -0.78
PROM1-206ENST00000505450 STK26Q9P289 416 aa10.18□□□□□ -0.78
PROM1-206ENST00000505450 DAPK1P53355 1430 aa10.17□□□□□ -0.78
PROM1-206ENST00000505450 NCLP19338 710 aaKnown RBP10.17□□□□□ -0.78
PROM1-206ENST00000505450 KIAA1107Q9UPP5 1409 aa10.17□□□□□ -0.78
PROM1-206ENST00000505450 VSIG10Q8N0Z9 540 aa10.17□□□□□ -0.78
PROM1-206ENST00000505450 DNMBPQ6XZF7 1577 aa10.17□□□□□ -0.78
PROM1-206ENST00000505450 ANKRD50Q9ULJ7 1429 aa10.17□□□□□ -0.78
PROM1-206ENST00000505450 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
PROM1-206ENST00000505450 SOX12O15370 315 aa10.16□□□□□ -0.78
PROM1-206ENST00000505450 FOXD4L1Q9NU39 408 aa10.15□□□□□ -0.78
PROM1-206ENST00000505450 KANK1Q14678 1352 aa10.15□□□□□ -0.78
PROM1-206ENST00000505450 CFAP43Q8NDM7 1665 aa10.15□□□□□ -0.78
PROM1-206ENST00000505450 ABCC5O15440 1437 aa10.15□□□□□ -0.79
PROM1-206ENST00000505450 HSCBQ8IWL3 235 aa10.15□□□□□ -0.79
PROM1-206ENST00000505450 CCDC144AA2RUR9 1427 aa10.14□□□□□ -0.79
PROM1-206ENST00000505450 HSP90AB1P08238 724 aaKnown RBP10.14□□□□□ -0.79
PROM1-206ENST00000505450 PPP2R1AP30153 589 aa10.14□□□□□ -0.79
PROM1-206ENST00000505450 FAM43AQ8N2R8 423 aa10.14□□□□□ -0.79
PROM1-206ENST00000505450 MYH16Q9H6N6 1097 aa10.14□□□□□ -0.79
PROM1-206ENST00000505450 EPRSP07814 1512 aaKnown RBP10.13□□□□□ -0.79
PROM1-206ENST00000505450 HSP90AA2PQ14568 343 aaPredicted RBP10.13□□□□□ -0.79
PROM1-206ENST00000505450 MORC1Q86VD1 984 aa10.13□□□□□ -0.79
PROM1-206ENST00000505450 RWDD1Q9H446 243 aaPredicted RBP10.13□□□□□ -0.79
PROM1-206ENST00000505450 CD109Q6YHK3 1445 aa10.13□□□□□ -0.79
PROM1-206ENST00000505450 MAPK8IP3Q9UPT6 1336 aa10.12□□□□□ -0.79
PROM1-206ENST00000505450 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
PROM1-206ENST00000505450 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
PROM1-206ENST00000505450 U2SURPO15042 1029 aaKnown RBP10.12□□□□□ -0.79
PROM1-206ENST00000505450 PMFBP1Q8TBY8 1022 aa10.12□□□□□ -0.79
PROM1-206ENST00000505450 MAGI1Q96QZ7 1491 aaPredicted RBP10.12□□□□□ -0.79
PROM1-206ENST00000505450 ABCA10Q8WWZ4 1543 aa10.12□□□□□ -0.79
PROM1-206ENST00000505450 E9PSI1 815 aa10.11□□□□□ -0.79
PROM1-206ENST00000505450 ARID3AQ99856 593 aa10.11□□□□□ -0.79
PROM1-206ENST00000505450 C8orf34Q49A92 452 aa10.11□□□□□ -0.79
PROM1-206ENST00000505450 KIF21AQ7Z4S6 1674 aa10.11□□□□□ -0.79
PROM1-206ENST00000505450 DUSP27Q5VZP5 1158 aa10.11□□□□□ -0.79
PROM1-206ENST00000505450 GRIN2AQ12879 1464 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 CFAP53Q96M91 514 aa10.1□□□□□ -0.79
PROM1-206ENST00000505450 SPATA31E1Q6ZUB1 1445 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms