RNA–Protein interactions for RNA: ENST00000505368.1

RAB5CP2-201, Transcript of RAB5C, member RAS oncogene family pseudogene 2, humanhuman

BASIC

Gene RAB5CP2, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP2-201ENST00000505368 MROH2AA6NES4 1674 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 MAST1Q9Y2H9 1570 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 RRP7BPQ9NSQ0 103 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 CAMSAP1Q5T5Y3 1602 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 KDM5DQ9BY66 1539 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 PTPRTO14522 1441 aa14.65□□□□□ -0.06
RAB5CP2-201ENST00000505368 PZPP20742 1482 aa14.64□□□□□ -0.07
RAB5CP2-201ENST00000505368 TCOF1Q13428 1488 aaKnown RBP14.64□□□□□ -0.07
RAB5CP2-201ENST00000505368 TNRQ92752 1358 aa14.64□□□□□ -0.07
RAB5CP2-201ENST00000505368 MROH1Q8NDA8 1641 aa14.64□□□□□ -0.07
RAB5CP2-201ENST00000505368 DAPK1P53355 1430 aa14.64□□□□□ -0.07
RAB5CP2-201ENST00000505368 MYO3AQ8NEV4 1616 aa14.63□□□□□ -0.07
RAB5CP2-201ENST00000505368 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
RAB5CP2-201ENST00000505368 APLP2Q06481 763 aa14.63□□□□□ -0.07
RAB5CP2-201ENST00000505368 CHIC2Q9UKJ5 165 aa14.63□□□□□ -0.07
RAB5CP2-201ENST00000505368 ABCC3O15438 1527 aa14.62□□□□□ -0.07
RAB5CP2-201ENST00000505368 CEP170BQ9Y4F5 1589 aaPredicted RBP14.62□□□□□ -0.07
RAB5CP2-201ENST00000505368 ZNF335Q9H4Z2 1342 aaPredicted RBP14.62□□□□□ -0.07
RAB5CP2-201ENST00000505368 PPARGC1BQ86YN6 1023 aaKnown RBP14.61□□□□□ -0.07
RAB5CP2-201ENST00000505368 LTBP4Q8N2S1 1624 aa14.61□□□□□ -0.07
RAB5CP2-201ENST00000505368 PTPN23Q9H3S7 1636 aa14.61□□□□□ -0.07
RAB5CP2-201ENST00000505368 A2ML1A8K2U0 1454 aa14.6□□□□□ -0.07
RAB5CP2-201ENST00000505368 SHANK2Q9UPX8 1470 aa14.6□□□□□ -0.07
RAB5CP2-201ENST00000505368 DMRT2Q9Y5R5 561 aa14.59□□□□□ -0.07
RAB5CP2-201ENST00000505368 PLA2R1Q13018 1463 aa14.58□□□□□ -0.08
RAB5CP2-201ENST00000505368 RNF17Q9BXT8 1623 aaKnown RBP14.58□□□□□ -0.08
RAB5CP2-201ENST00000505368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB5CP2-201ENST00000505368 DUOX2Q9NRD8 1548 aa14.56□□□□□ -0.08
RAB5CP2-201ENST00000505368 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.08
RAB5CP2-201ENST00000505368 ERVK-7P63135 1459 aa14.56□□□□□ -0.08
RAB5CP2-201ENST00000505368 FAM135AQ9P2D6 1515 aa14.56□□□□□ -0.08
RAB5CP2-201ENST00000505368 DNMT1P26358 1616 aaKnown RBP14.55□□□□□ -0.08
RAB5CP2-201ENST00000505368 ZNF142P52746 1687 aaPredicted RBP14.55□□□□□ -0.08
RAB5CP2-201ENST00000505368 FAM50AQ14320 339 aaKnown RBP14.55□□□□□ -0.08
RAB5CP2-201ENST00000505368 ERBINQ96RT1 1412 aa14.55□□□□□ -0.08
RAB5CP2-201ENST00000505368 SETD1BQ9UPS6 1966 aaKnown RBP14.54□□□□□ -0.08
RAB5CP2-201ENST00000505368 PKD2Q13563 968 aa14.54□□□□□ -0.08
RAB5CP2-201ENST00000505368 SPATA31D1Q6ZQQ2 1576 aa14.53□□□□□ -0.08
RAB5CP2-201ENST00000505368 NEURL4Q96JN8 1562 aa14.53□□□□□ -0.08
RAB5CP2-201ENST00000505368 PRDM15P57071 1507 aaPredicted RBP14.52□□□□□ -0.08
RAB5CP2-201ENST00000505368 ANKRD30AQ9BXX3 1397 aa14.51□□□□□ -0.09
RAB5CP2-201ENST00000505368 CROCC2H7BZ55 1655 aa14.51□□□□□ -0.09
RAB5CP2-201ENST00000505368 EIF2AK4Q9P2K8 1649 aaKnown RBP14.51□□□□□ -0.09
RAB5CP2-201ENST00000505368 ADGRL2O95490 1459 aa14.5□□□□□ -0.09
RAB5CP2-201ENST00000505368 NLRP1Q9C000 1473 aa14.5□□□□□ -0.09
RAB5CP2-201ENST00000505368 ARHGAP31Q2M1Z3 1444 aa14.49□□□□□ -0.09
RAB5CP2-201ENST00000505368 UGGT1Q9NYU2 1555 aa14.48□□□□□ -0.09
RAB5CP2-201ENST00000505368 LTKP29376 864 aa14.47□□□□□ -0.09
RAB5CP2-201ENST00000505368 VWDEQ8N2E2 1590 aa14.47□□□□□ -0.09
RAB5CP2-201ENST00000505368 ANKLE2Q86XL3 938 aa14.46□□□□□ -0.09
RAB5CP2-201ENST00000505368 THEMISQ8N1K5 641 aaPredicted RBP14.46□□□□□ -0.09
RAB5CP2-201ENST00000505368 NPHP4O75161 1426 aaPredicted RBP14.46□□□□□ -0.09
RAB5CP2-201ENST00000505368 CEP152O94986 1710 aa14.45□□□□□ -0.1
RAB5CP2-201ENST00000505368 ANKRD50Q9ULJ7 1429 aa14.45□□□□□ -0.1
RAB5CP2-201ENST00000505368 LMTK2Q8IWU2 1503 aa14.45□□□□□ -0.1
RAB5CP2-201ENST00000505368 DEPDC5O75140 1603 aa14.44□□□□□ -0.1
RAB5CP2-201ENST00000505368 MED14O60244 1454 aa14.44□□□□□ -0.1
RAB5CP2-201ENST00000505368 ZC3H13Q5T200 1668 aaKnown RBP14.43□□□□□ -0.1
RAB5CP2-201ENST00000505368 ITGAEP38570 1179 aa14.43□□□□□ -0.1
RAB5CP2-201ENST00000505368 IDI1Q13907 227 aa14.43□□□□□ -0.1
RAB5CP2-201ENST00000505368 NOS1P29475 1434 aa14.42□□□□□ -0.1
RAB5CP2-201ENST00000505368 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
RAB5CP2-201ENST00000505368 SYNMO15061 1565 aa14.41□□□□□ -0.1
RAB5CP2-201ENST00000505368 IQSEC2Q5JU85 1478 aa14.4□□□□□ -0.1
RAB5CP2-201ENST00000505368 KANK1Q14678 1352 aa14.4□□□□□ -0.1
RAB5CP2-201ENST00000505368 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
RAB5CP2-201ENST00000505368 TXNDC2Q86VQ3 553 aa14.39□□□□□ -0.11
RAB5CP2-201ENST00000505368 EFCAB6Q5THR3 1501 aa14.39□□□□□ -0.11
RAB5CP2-201ENST00000505368 SCAF11Q99590 1463 aaKnown RBP14.38□□□□□ -0.11
RAB5CP2-201ENST00000505368 ROCK1Q13464 1354 aa14.38□□□□□ -0.11
RAB5CP2-201ENST00000505368 TMEM2Q9UHN6 1383 aa14.38□□□□□ -0.11
RAB5CP2-201ENST00000505368 SENP3Q9H4L4 574 aaPredicted RBP14.38□□□□□ -0.11
RAB5CP2-201ENST00000505368 SLIT1O75093 1534 aa14.37□□□□□ -0.11
RAB5CP2-201ENST00000505368 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
RAB5CP2-201ENST00000505368 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
RAB5CP2-201ENST00000505368 UBR1Q8IWV7 1749 aa14.35□□□□□ -0.11
RAB5CP2-201ENST00000505368 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
RAB5CP2-201ENST00000505368 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
RAB5CP2-201ENST00000505368 CPS1P31327 1500 aa14.33□□□□□ -0.12
RAB5CP2-201ENST00000505368 LRRC7Q96NW7 1537 aa14.33□□□□□ -0.12
RAB5CP2-201ENST00000505368 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
RAB5CP2-201ENST00000505368 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
RAB5CP2-201ENST00000505368 UNC13BO14795 1591 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 IQGAP1P46940 1657 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 HSPA1LP34931 641 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 NUP155O75694 1391 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 ADGRB3O60242 1522 aa14.31□□□□□ -0.12
RAB5CP2-201ENST00000505368 STRCP1A6NGW2 1772 aa14.3□□□□□ -0.12
RAB5CP2-201ENST00000505368 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
RAB5CP2-201ENST00000505368 ZFYVE9O95405 1425 aa14.3□□□□□ -0.12
RAB5CP2-201ENST00000505368 SLC52A1Q9NWF4 448 aa14.29□□□□□ -0.12
RAB5CP2-201ENST00000505368 RPRD2Q5VT52 1461 aaKnown RBP14.29□□□□□ -0.12
RAB5CP2-201ENST00000505368 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
RAB5CP2-201ENST00000505368 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
RAB5CP2-201ENST00000505368 NAIPQ13075 1403 aa14.27□□□□□ -0.12
RAB5CP2-201ENST00000505368 TET3O43151 1660 aa14.26□□□□□ -0.13
RAB5CP2-201ENST00000505368 RIMS2Q9UQ26 1411 aa14.25□□□□□ -0.13
RAB5CP2-201ENST00000505368 CHGAP10645 457 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms