RNA–Protein interactions for RNA: ENST00000504985.5

SSBP2-204, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-204ENST00000504985 SPRYD3Q8NCJ5 442 aa11.46□□□□□ -0.57
SSBP2-204ENST00000504985 KCTD12Q96CX2 325 aaKnown RBP11.46□□□□□ -0.57
SSBP2-204ENST00000504985 TYW1BQ6NUM6 668 aa11.45□□□□□ -0.58
SSBP2-204ENST00000504985 FBXW7Q969H0 707 aa11.45□□□□□ -0.58
SSBP2-204ENST00000504985 PPP1R3GB7ZBB8 358 aa11.44□□□□□ -0.58
SSBP2-204ENST00000504985 UNC13AQ9UPW8 1703 aa11.44□□□□□ -0.58
SSBP2-204ENST00000504985 DPYSL4O14531 572 aa11.43□□□□□ -0.58
SSBP2-204ENST00000504985 PLA2G2EQ9NZK7 142 aa11.43□□□□□ -0.58
SSBP2-204ENST00000504985 COL9A1P20849 921 aa11.42□□□□□ -0.58
SSBP2-204ENST00000504985 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
SSBP2-204ENST00000504985 EPAS1Q99814 870 aa11.41□□□□□ -0.58
SSBP2-204ENST00000504985 THSD4Q6ZMP0 1018 aa11.4□□□□□ -0.59
SSBP2-204ENST00000504985 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.59
SSBP2-204ENST00000504985 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
SSBP2-204ENST00000504985 RABGEF1Q9UJ41 708 aa11.39□□□□□ -0.59
SSBP2-204ENST00000504985 ONECUT3O60422 494 aaPredicted RBP11.38□□□□□ -0.59
SSBP2-204ENST00000504985 PDIA6Q15084 440 aa11.37□□□□□ -0.59
SSBP2-204ENST00000504985 PROX2Q3B8N5 592 aa11.37□□□□□ -0.59
SSBP2-204ENST00000504985 C6orf132Q5T0Z8 1188 aa11.37□□□□□ -0.59
SSBP2-204ENST00000504985 MRPL50Q8N5N7 158 aaKnown RBP11.37□□□□□ -0.59
SSBP2-204ENST00000504985 NBPF3Q9H094 633 aa11.36□□□□□ -0.59
SSBP2-204ENST00000504985 IFFO2Q5TF58 517 aa11.34□□□□□ -0.59
SSBP2-204ENST00000504985 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
SSBP2-204ENST00000504985 WNT2BQ93097 391 aa11.33□□□□□ -0.6
SSBP2-204ENST00000504985 PTPN5P54829 565 aa11.32□□□□□ -0.6
SSBP2-204ENST00000504985 PAXIP1Q6ZW49 1069 aaPredicted RBP11.31□□□□□ -0.6
SSBP2-204ENST00000504985 LAPTM4BQ86VI4 370 aa11.31□□□□□ -0.6
SSBP2-204ENST00000504985 BICRAQ9NZM4 1560 aa11.31□□□□□ -0.6
SSBP2-204ENST00000504985 E2F4Q16254 413 aa11.3□□□□□ -0.6
SSBP2-204ENST00000504985 DDX12PQ92771 950 aa11.3□□□□□ -0.6
SSBP2-204ENST00000504985 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
SSBP2-204ENST00000504985 EN1Q05925 392 aaPredicted RBP11.28□□□□□ -0.6
SSBP2-204ENST00000504985 KIAA1468Q9P260 1216 aa11.28□□□□□ -0.6
SSBP2-204ENST00000504985 TRIM6-TRIM34B2RNG4 842 aa11.28□□□□□ -0.6
SSBP2-204ENST00000504985 CFAP44Q96MT7 982 aa11.28□□□□□ -0.6
SSBP2-204ENST00000504985 RBM33Q96EV2 1170 aaKnown RBP11.25□□□□□ -0.61
SSBP2-204ENST00000504985 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
SSBP2-204ENST00000504985 ZFRQ96KR1 1074 aaKnown RBP11.24□□□□□ -0.61
SSBP2-204ENST00000504985 SOWAHBA6NEL2 793 aa11.23□□□□□ -0.61
SSBP2-204ENST00000504985 NBR1Q14596 966 aa11.23□□□□□ -0.61
SSBP2-204ENST00000504985 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
SSBP2-204ENST00000504985 ANKK1Q8NFD2 765 aa11.22□□□□□ -0.61
SSBP2-204ENST00000504985 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
SSBP2-204ENST00000504985 WDR70Q9NW82 654 aa11.2□□□□□ -0.62
SSBP2-204ENST00000504985 BCAMP50895 628 aa11.19□□□□□ -0.62
SSBP2-204ENST00000504985 FAM98CQ17RN3 349 aaKnown RBP11.19□□□□□ -0.62
SSBP2-204ENST00000504985 MAP3K7O43318 606 aa11.18□□□□□ -0.62
SSBP2-204ENST00000504985 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-204ENST00000504985 OSBPP22059 807 aa11.18□□□□□ -0.62
SSBP2-204ENST00000504985 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
SSBP2-204ENST00000504985 FAM198AQ9UFP1 575 aa11.17□□□□□ -0.62
SSBP2-204ENST00000504985 RGS20O76081 388 aa11.16□□□□□ -0.62
SSBP2-204ENST00000504985 CECR2Q9BXF3 1484 aa11.16□□□□□ -0.62
SSBP2-204ENST00000504985 A0A0G2JS52 829 aa11.16□□□□□ -0.62
SSBP2-204ENST00000504985 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
SSBP2-204ENST00000504985 CERKQ8TCT0 537 aa11.16□□□□□ -0.62
SSBP2-204ENST00000504985 PRSS12P56730 875 aa11.15□□□□□ -0.63
SSBP2-204ENST00000504985 PACS2Q86VP3 889 aa11.14□□□□□ -0.63
SSBP2-204ENST00000504985 CDCA7LQ96GN5 454 aa11.14□□□□□ -0.63
SSBP2-204ENST00000504985 GRXCR2A6NFK2 248 aa11.13□□□□□ -0.63
SSBP2-204ENST00000504985 WBP1LQ9NX94 342 aa11.13□□□□□ -0.63
SSBP2-204ENST00000504985 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
SSBP2-204ENST00000504985 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
SSBP2-204ENST00000504985 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
SSBP2-204ENST00000504985 MROH2BQ7Z745 1585 aa11.1□□□□□ -0.63
SSBP2-204ENST00000504985 TTC13Q8NBP0 860 aa11.1□□□□□ -0.63
SSBP2-204ENST00000504985 RBM27Q9P2N5 1060 aaKnown RBP11.1□□□□□ -0.63
SSBP2-204ENST00000504985 SUPT5HO00267 1087 aaKnown RBP11.09□□□□□ -0.63
SSBP2-204ENST00000504985 CDHR5Q9HBB8 845 aa11.09□□□□□ -0.63
SSBP2-204ENST00000504985 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-204ENST00000504985 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-204ENST00000504985 TSR3Q9UJK0 312 aaKnown RBP11.09□□□□□ -0.63
SSBP2-204ENST00000504985 BAZ1AQ9NRL2 1556 aaPredicted RBP11.09□□□□□ -0.63
SSBP2-204ENST00000504985 SMARCA4P51532 1647 aa11.08□□□□□ -0.64
SSBP2-204ENST00000504985 ARHGEF1Q92888 912 aaKnown RBP11.07□□□□□ -0.64
SSBP2-204ENST00000504985 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
SSBP2-204ENST00000504985 TATDN2Q93075 761 aa11.06□□□□□ -0.64
SSBP2-204ENST00000504985 HPS5Q9UPZ3 1129 aa11.05□□□□□ -0.64
SSBP2-204ENST00000504985 SMAPO00193 183 aa11.04□□□□□ -0.64
SSBP2-204ENST00000504985 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
SSBP2-204ENST00000504985 WIZO95785 1651 aa11.02□□□□□ -0.65
SSBP2-204ENST00000504985 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
SSBP2-204ENST00000504985 SAMD7Q7Z3H4 446 aa11.02□□□□□ -0.65
SSBP2-204ENST00000504985 KCNC4Q03721 635 aa11.01□□□□□ -0.65
SSBP2-204ENST00000504985 PNMA3Q9UL41 463 aa11.01□□□□□ -0.65
SSBP2-204ENST00000504985 MLLT3P42568 568 aaPredicted RBP10.99□□□□□ -0.65
SSBP2-204ENST00000504985 NUDT18Q6ZVK8 323 aa10.99□□□□□ -0.65
SSBP2-204ENST00000504985 PPP4CP60510 307 aa10.98□□□□□ -0.65
SSBP2-204ENST00000504985 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
SSBP2-204ENST00000504985 PADI6Q6TGC4 694 aa10.96□□□□□ -0.65
SSBP2-204ENST00000504985 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.65
SSBP2-204ENST00000504985 PEG3Q9GZU2 1588 aa10.95□□□□□ -0.66
SSBP2-204ENST00000504985 EYA1Q99502 592 aa10.95□□□□□ -0.66
SSBP2-204ENST00000504985 EIF4G1Q04637 1599 aaKnown RBP10.94□□□□□ -0.66
SSBP2-204ENST00000504985 PTGDRQ13258 359 aa10.92□□□□□ -0.66
SSBP2-204ENST00000504985 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
SSBP2-204ENST00000504985 APLP1P51693 650 aa10.89□□□□□ -0.67
SSBP2-204ENST00000504985 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
SSBP2-204ENST00000504985 IRX2Q9BZI1 471 aaPredicted RBP10.89□□□□□ -0.67
SSBP2-204ENST00000504985 MTRQ99707 1265 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms