RNA–Protein interactions for RNA: ENST00000504880.5

SLC38A9-208, Transcript of solute carrier family 38 member 9, human

TSL 5

Gene SLC38A9, Length 2,040 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC38A9-208	ENST00000504880	ANP32C	O43423	234 aa		32.07	■■■□□ 2.72
SLC38A9-208	ENST00000504880	KIDINS220	Q9ULH0	1771 aa		32.03	■■■□□ 2.72
SLC38A9-208	ENST00000504880	CYB5RL	Q6IPT4	315 aa		32.02	■■■□□ 2.72
SLC38A9-208	ENST00000504880	DEPDC5	O75140	1603 aa		32.02	■■■□□ 2.72
SLC38A9-208	ENST00000504880	SPATA31E1	Q6ZUB1	1445 aa		32.02	■■■□□ 2.72
SLC38A9-208	ENST00000504880	CFAP74	Q9C0B2	1584 aa		31.99	■■■□□ 2.71
SLC38A9-208	ENST00000504880	CCER2	I3L3R5	266 aa		31.99	■■■□□ 2.71
SLC38A9-208	ENST00000504880	C11orf95	C9JLR9	678 aa	Predicted RBP	31.99	■■■□□ 2.71
SLC38A9-208	ENST00000504880	ZNF326	Q5BKZ1	582 aa	Known RBP	31.97	■■■□□ 2.71
SLC38A9-208	ENST00000504880	CCDC144A	A2RUR9	1427 aa		31.96	■■■□□ 2.71
SLC38A9-208	ENST00000504880	ZNF518A	Q6AHZ1	1483 aa		31.96	■■■□□ 2.71
SLC38A9-208	ENST00000504880	UHRF1BP1	Q6BDS2	1440 aa		31.95	■■■□□ 2.71
SLC38A9-208	ENST00000504880		E9PCH4	1651 aa		31.95	■■■□□ 2.7
SLC38A9-208	ENST00000504880	POGZ	Q7Z3K3	1410 aa		31.94	■■■□□ 2.7
SLC38A9-208	ENST00000504880	KDM5C	P41229	1560 aa		31.94	■■■□□ 2.7
SLC38A9-208	ENST00000504880	CCDC7	Q96M83	1385 aa		31.93	■■■□□ 2.7
SLC38A9-208	ENST00000504880	MROH1	Q8NDA8	1641 aa		31.93	■■■□□ 2.7
SLC38A9-208	ENST00000504880	MYT1L	Q9UL68	1186 aa		31.92	■■■□□ 2.7
SLC38A9-208	ENST00000504880	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.9	■■■□□ 2.7
SLC38A9-208	ENST00000504880	VWDE	Q8N2E2	1590 aa		31.9	■■■□□ 2.7
SLC38A9-208	ENST00000504880	DHX29	Q7Z478	1369 aa	Known RBP	31.9	■■■□□ 2.7
SLC38A9-208	ENST00000504880	ATP10A	O60312	1499 aa		31.89	■■■□□ 2.7
SLC38A9-208	ENST00000504880	MAP3K4	Q9Y6R4	1608 aa		31.88	■■■□□ 2.69
SLC38A9-208	ENST00000504880	RALGAPB	Q86X10	1494 aa		31.88	■■■□□ 2.69
SLC38A9-208	ENST00000504880	CNTLN	Q9NXG0	1405 aa		31.87	■■■□□ 2.69
SLC38A9-208	ENST00000504880	KDM2A	Q9Y2K7	1162 aa		31.87	■■■□□ 2.69
SLC38A9-208	ENST00000504880	PRDM15	P57071	1507 aa	Predicted RBP	31.86	■■■□□ 2.69
SLC38A9-208	ENST00000504880	DCAF11	Q8TEB1	546 aa		31.85	■■■□□ 2.69
SLC38A9-208	ENST00000504880	KIF3B	O15066	747 aa		31.85	■■■□□ 2.69
SLC38A9-208	ENST00000504880	A2M	P01023	1474 aa		31.84	■■■□□ 2.69
SLC38A9-208	ENST00000504880	HECW2	Q9P2P5	1572 aa		31.84	■■■□□ 2.69
SLC38A9-208	ENST00000504880	TET3	O43151	1660 aa		31.84	■■■□□ 2.69
SLC38A9-208	ENST00000504880	USP47	Q96K76	1375 aa		31.84	■■■□□ 2.69
SLC38A9-208	ENST00000504880	FRMPD1	Q5SYB0	1578 aa		31.84	■■■□□ 2.69
SLC38A9-208	ENST00000504880	NEO1	Q92859	1461 aa		31.83	■■■□□ 2.69
SLC38A9-208	ENST00000504880	POLR1A	O95602	1720 aa	Predicted RBP	31.83	■■■□□ 2.69
SLC38A9-208	ENST00000504880	KIF7	Q2M1P5	1343 aa		31.82	■■■□□ 2.68
SLC38A9-208	ENST00000504880	ABCA6	Q8N139	1617 aa		31.81	■■■□□ 2.68
SLC38A9-208	ENST00000504880	MLH3	Q9UHC1	1453 aa		31.8	■■■□□ 2.68
SLC38A9-208	ENST00000504880	RGL3	Q3MIN7	710 aa		31.8	■■■□□ 2.68
SLC38A9-208	ENST00000504880	SPHKAP	Q2M3C7	1700 aa		31.79	■■■□□ 2.68
SLC38A9-208	ENST00000504880	BCORL1	Q5H9F3	1711 aa		31.79	■■■□□ 2.68
SLC38A9-208	ENST00000504880	GLI2	P10070	1586 aa		31.77	■■■□□ 2.68
SLC38A9-208	ENST00000504880	TRPM2	O94759	1503 aa		31.77	■■■□□ 2.68
SLC38A9-208	ENST00000504880	PRAG1	Q86YV5	1406 aa		31.76	■■■□□ 2.68
SLC38A9-208	ENST00000504880	RAPGEF3	O95398	923 aa		31.76	■■■□□ 2.67
SLC38A9-208	ENST00000504880	TRPM1	Q7Z4N2	1603 aa		31.75	■■■□□ 2.67
SLC38A9-208	ENST00000504880	DIP2B	Q9P265	1576 aa		31.74	■■■□□ 2.67
SLC38A9-208	ENST00000504880	CLTCL1	P53675	1640 aa		31.74	■■■□□ 2.67
SLC38A9-208	ENST00000504880	RNF17	Q9BXT8	1623 aa	Known RBP	31.74	■■■□□ 2.67
SLC38A9-208	ENST00000504880	RICTOR	Q6R327	1708 aa		31.73	■■■□□ 2.67
SLC38A9-208	ENST00000504880	PTPRT	O14522	1441 aa		31.73	■■■□□ 2.67
SLC38A9-208	ENST00000504880	KANK1	Q14678	1352 aa		31.73	■■■□□ 2.67
SLC38A9-208	ENST00000504880	CARD11	Q9BXL7	1154 aa		31.71	■■■□□ 2.67
SLC38A9-208	ENST00000504880	CEP152	O94986	1710 aa		31.71	■■■□□ 2.67
SLC38A9-208	ENST00000504880	PPRC1	Q5VV67	1664 aa	Known RBP	31.7	■■■□□ 2.67
SLC38A9-208	ENST00000504880	EFCAB6	Q5THR3	1501 aa		31.68	■■■□□ 2.66
SLC38A9-208	ENST00000504880	DIP2C	Q9Y2E4	1556 aa		31.67	■■■□□ 2.66
SLC38A9-208	ENST00000504880	UGGT1	Q9NYU2	1555 aa		31.65	■■■□□ 2.66
SLC38A9-208	ENST00000504880	ROCK2	O75116	1388 aa	Known RBP	31.64	■■■□□ 2.66
SLC38A9-208	ENST00000504880	LMTK2	Q8IWU2	1503 aa		31.63	■■■□□ 2.65
SLC38A9-208	ENST00000504880	FAM69C	Q0P6D2	419 aa		31.63	■■■□□ 2.65
SLC38A9-208	ENST00000504880	PRKRIP1	Q9H875	184 aa	Predicted RBP	31.62	■■■□□ 2.65
SLC38A9-208	ENST00000504880	TSPOAP1	O95153	1857 aa		31.61	■■■□□ 2.65
SLC38A9-208	ENST00000504880	NBPF1	Q3BBV0	1214 aa		31.6	■■■□□ 2.65
SLC38A9-208	ENST00000504880	YEATS2	Q9ULM3	1422 aa		31.59	■■■□□ 2.65
SLC38A9-208	ENST00000504880	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.58	■■■□□ 2.65
SLC38A9-208	ENST00000504880	ST20-MTHFS	A0A0A6YYL1	179 aa		31.56	■■■□□ 2.64
SLC38A9-208	ENST00000504880	MADD	Q8WXG6	1647 aa		31.56	■■■□□ 2.64
SLC38A9-208	ENST00000504880	POLR3GL	Q9BT43	218 aa		31.55	■■■□□ 2.64
SLC38A9-208	ENST00000504880	GPRASP1	Q5JY77	1395 aa		31.55	■■■□□ 2.64
SLC38A9-208	ENST00000504880	CCDC184	Q52MB2	194 aa		31.54	■■■□□ 2.64
SLC38A9-208	ENST00000504880	GGT6	Q6P531	493 aa		31.54	■■■□□ 2.64
SLC38A9-208	ENST00000504880	LAMC1	P11047	1609 aa		31.53	■■■□□ 2.64
SLC38A9-208	ENST00000504880	ABCC3	O15438	1527 aa		31.52	■■■□□ 2.64
SLC38A9-208	ENST00000504880	NPAT	Q14207	1427 aa		31.5	■■■□□ 2.63
SLC38A9-208	ENST00000504880	MROH2A	A6NES4	1674 aa		31.5	■■■□□ 2.63
SLC38A9-208	ENST00000504880	ZMYM4	Q5VZL5	1548 aa		31.47	■■■□□ 2.63
SLC38A9-208	ENST00000504880	SUPT16H	Q9Y5B9	1047 aa	Known RBP	31.46	■■■□□ 2.63
SLC38A9-208	ENST00000504880	CFAP65	Q6ZU64	1925 aa	Known RBP	31.45	■■■□□ 2.63
SLC38A9-208	ENST00000504880	CAMSAP1	Q5T5Y3	1602 aa		31.45	■■■□□ 2.63
SLC38A9-208	ENST00000504880	KIF13A	Q9H1H9	1805 aa		31.45	■■■□□ 2.62
SLC38A9-208	ENST00000504880	NEURL4	Q96JN8	1562 aa		31.44	■■■□□ 2.62
SLC38A9-208	ENST00000504880	KIF1B	O60333	1816 aa		31.43	■■■□□ 2.62
SLC38A9-208	ENST00000504880	SIGLEC1	Q9BZZ2	1709 aa		31.43	■■■□□ 2.62
SLC38A9-208	ENST00000504880	HNRNPU	Q00839	825 aa	Known RBP eCLIP	31.41	■■■□□ 2.62
SLC38A9-208	ENST00000504880	MRS2	Q9HD23	443 aa		31.39	■■■□□ 2.62
SLC38A9-208	ENST00000504880	WASHC2C	Q9Y4E1	1318 aa		31.39	■■■□□ 2.62
SLC38A9-208	ENST00000504880	IFT172	Q9UG01	1749 aa		31.39	■■■□□ 2.62
SLC38A9-208	ENST00000504880	ADGRB3	O60242	1522 aa		31.37	■■■□□ 2.61
SLC38A9-208	ENST00000504880	IQGAP1	P46940	1657 aa		31.35	■■■□□ 2.61
SLC38A9-208	ENST00000504880	CNGB1	Q14028	1251 aa	Predicted RBP	31.32	■■■□□ 2.6
SLC38A9-208	ENST00000504880	TESK2	Q96S53	571 aa		31.32	■■■□□ 2.6
SLC38A9-208	ENST00000504880	SYNM	O15061	1565 aa		31.32	■■■□□ 2.6
SLC38A9-208	ENST00000504880	ZC3H13	Q5T200	1668 aa	Known RBP	31.32	■■■□□ 2.6
SLC38A9-208	ENST00000504880	MYOM2	P54296	1465 aa		31.31	■■■□□ 2.6
SLC38A9-208	ENST00000504880	COL17A1	Q9UMD9	1497 aa	Predicted RBP	31.31	■■■□□ 2.6
SLC38A9-208	ENST00000504880	FAM9B	Q8IZU0	186 aa		31.31	■■■□□ 2.6
SLC38A9-208	ENST00000504880	NOS1	P29475	1434 aa		31.29	■■■□□ 2.6
SLC38A9-208	ENST00000504880	DISP3	Q9P2K9	1392 aa		31.29	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms