RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 CCDC144AA2RUR9 1427 aa13.73□□□□□ -0.21
COL1A1-210ENST00000504289 EIF2AK4Q9P2K8 1649 aaKnown RBP13.73□□□□□ -0.21
COL1A1-210ENST00000504289 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
COL1A1-210ENST00000504289 ATP7AQ04656 1500 aa13.72□□□□□ -0.21
COL1A1-210ENST00000504289 SCAPERQ9BY12 1400 aa13.72□□□□□ -0.21
COL1A1-210ENST00000504289 DEPDC5O75140 1603 aa13.72□□□□□ -0.21
COL1A1-210ENST00000504289 ZNF518AQ6AHZ1 1483 aa13.71□□□□□ -0.21
COL1A1-210ENST00000504289 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
COL1A1-210ENST00000504289 DHX29Q7Z478 1369 aaKnown RBP13.7□□□□□ -0.22
COL1A1-210ENST00000504289 KANK1Q14678 1352 aa13.69□□□□□ -0.22
COL1A1-210ENST00000504289 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
COL1A1-210ENST00000504289 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 NEO1Q92859 1461 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 VWDEQ8N2E2 1590 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 CD109Q6YHK3 1445 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 AFAP1Q8N556 730 aa13.68□□□□□ -0.22
COL1A1-210ENST00000504289 SCAF1Q9H7N4 1312 aaKnown RBP13.67□□□□□ -0.22
COL1A1-210ENST00000504289 NEURL4Q96JN8 1562 aa13.67□□□□□ -0.22
COL1A1-210ENST00000504289 MLH3Q9UHC1 1453 aa13.67□□□□□ -0.22
COL1A1-210ENST00000504289 PTPRTO14522 1441 aa13.66□□□□□ -0.22
COL1A1-210ENST00000504289 CNTLNQ9NXG0 1405 aa13.66□□□□□ -0.22
COL1A1-210ENST00000504289 HIRIP3Q9BW71 556 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-210ENST00000504289 KDM5CP41229 1560 aa13.66□□□□□ -0.22
COL1A1-210ENST00000504289 TET3O43151 1660 aa13.66□□□□□ -0.22
COL1A1-210ENST00000504289 YTHDC1Q96MU7 727 aaKnown RBP13.65□□□□□ -0.22
COL1A1-210ENST00000504289 ROCK2O75116 1388 aaKnown RBP13.65□□□□□ -0.22
COL1A1-210ENST00000504289 USP47Q96K76 1375 aa13.65□□□□□ -0.22
COL1A1-210ENST00000504289 PRDM15P57071 1507 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-210ENST00000504289 LAMC1P11047 1609 aa13.64□□□□□ -0.23
COL1A1-210ENST00000504289 GPRASP1Q5JY77 1395 aa13.64□□□□□ -0.23
COL1A1-210ENST00000504289 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
COL1A1-210ENST00000504289 TRPM2O94759 1503 aa13.64□□□□□ -0.23
COL1A1-210ENST00000504289 POGZQ7Z3K3 1410 aa13.64□□□□□ -0.23
COL1A1-210ENST00000504289 GLI2P10070 1586 aa13.63□□□□□ -0.23
COL1A1-210ENST00000504289 LMTK2Q8IWU2 1503 aa13.63□□□□□ -0.23
COL1A1-210ENST00000504289 PRAG1Q86YV5 1406 aa13.63□□□□□ -0.23
COL1A1-210ENST00000504289 BCORL1Q5H9F3 1711 aa13.62□□□□□ -0.23
COL1A1-210ENST00000504289 PELP1Q8IZL8 1130 aaKnown RBP13.62□□□□□ -0.23
COL1A1-210ENST00000504289 DCAF11Q8TEB1 546 aa13.62□□□□□ -0.23
COL1A1-210ENST00000504289 KIDINS220Q9ULH0 1771 aa13.61□□□□□ -0.23
COL1A1-210ENST00000504289 CARD11Q9BXL7 1154 aa13.6□□□□□ -0.23
COL1A1-210ENST00000504289 RNF17Q9BXT8 1623 aaKnown RBP13.6□□□□□ -0.23
COL1A1-210ENST00000504289 A2MP01023 1474 aa13.6□□□□□ -0.23
COL1A1-210ENST00000504289 KIF7Q2M1P5 1343 aa13.6□□□□□ -0.23
COL1A1-210ENST00000504289 E9PCH4 1651 aa13.59□□□□□ -0.23
COL1A1-210ENST00000504289 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
COL1A1-210ENST00000504289 HECW2Q9P2P5 1572 aa13.58□□□□□ -0.23
COL1A1-210ENST00000504289 GTF3C3Q9Y5Q9 886 aa13.58□□□□□ -0.24
COL1A1-210ENST00000504289 SPHKAPQ2M3C7 1700 aa13.58□□□□□ -0.24
COL1A1-210ENST00000504289 MROH1Q8NDA8 1641 aa13.57□□□□□ -0.24
COL1A1-210ENST00000504289 KIF3BO15066 747 aa13.57□□□□□ -0.24
COL1A1-210ENST00000504289 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
COL1A1-210ENST00000504289 C11orf95C9JLR9 678 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-210ENST00000504289 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
COL1A1-210ENST00000504289 CEP152O94986 1710 aa13.56□□□□□ -0.24
COL1A1-210ENST00000504289 EFCAB6Q5THR3 1501 aa13.55□□□□□ -0.24
COL1A1-210ENST00000504289 ZNF326Q5BKZ1 582 aaKnown RBP13.55□□□□□ -0.24
COL1A1-210ENST00000504289 KTN1Q86UP2 1357 aaKnown RBP13.55□□□□□ -0.24
COL1A1-210ENST00000504289 KDM2AQ9Y2K7 1162 aa13.54□□□□□ -0.24
COL1A1-210ENST00000504289 SLC24A1O60721 1099 aa13.53□□□□□ -0.24
COL1A1-210ENST00000504289 PRKRIP1Q9H875 184 aaPredicted RBP13.53□□□□□ -0.24
COL1A1-210ENST00000504289 MYT1LQ9UL68 1186 aa13.53□□□□□ -0.24
COL1A1-210ENST00000504289 KIAA1210Q9ULL0 1709 aa13.51□□□□□ -0.25
COL1A1-210ENST00000504289 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
COL1A1-210ENST00000504289 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
COL1A1-210ENST00000504289 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
COL1A1-210ENST00000504289 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
COL1A1-210ENST00000504289 MYOM2P54296 1465 aa13.49□□□□□ -0.25
COL1A1-210ENST00000504289 ST20-MTHFSA0A0A6YYL1 179 aa13.49□□□□□ -0.25
COL1A1-210ENST00000504289 ARHGAP31Q2M1Z3 1444 aa13.48□□□□□ -0.25
COL1A1-210ENST00000504289 RICTORQ6R327 1708 aa13.48□□□□□ -0.25
COL1A1-210ENST00000504289 WASHC2CQ9Y4E1 1318 aa13.48□□□□□ -0.25
COL1A1-210ENST00000504289 MADDQ8WXG6 1647 aa13.48□□□□□ -0.25
COL1A1-210ENST00000504289 ZMYM4Q5VZL5 1548 aa13.48□□□□□ -0.25
COL1A1-210ENST00000504289 ABCA6Q8N139 1617 aa13.47□□□□□ -0.25
COL1A1-210ENST00000504289 PPRC1Q5VV67 1664 aaKnown RBP13.47□□□□□ -0.25
COL1A1-210ENST00000504289 KIF1BO60333 1816 aa13.46□□□□□ -0.25
COL1A1-210ENST00000504289 DIP2CQ9Y2E4 1556 aa13.46□□□□□ -0.25
COL1A1-210ENST00000504289 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.25
COL1A1-210ENST00000504289 ZC3H13Q5T200 1668 aaKnown RBP13.46□□□□□ -0.26
COL1A1-210ENST00000504289 DIP2BQ9P265 1576 aa13.45□□□□□ -0.26
COL1A1-210ENST00000504289 COL17A1Q9UMD9 1497 aaPredicted RBP13.45□□□□□ -0.26
COL1A1-210ENST00000504289 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
COL1A1-210ENST00000504289 ABCC3O15438 1527 aa13.44□□□□□ -0.26
COL1A1-210ENST00000504289 CDCA8Q53HL2 280 aa13.44□□□□□ -0.26
COL1A1-210ENST00000504289 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
COL1A1-210ENST00000504289 EIF3AQ14152 1382 aaKnown RBP13.44□□□□□ -0.26
COL1A1-210ENST00000504289 SCAF11Q99590 1463 aaKnown RBP13.43□□□□□ -0.26
COL1A1-210ENST00000504289 NRXN1Q9ULB1 1477 aa13.43□□□□□ -0.26
COL1A1-210ENST00000504289 TMF1P82094 1093 aa13.43□□□□□ -0.26
COL1A1-210ENST00000504289 RALBP1Q15311 655 aa13.43□□□□□ -0.26
COL1A1-210ENST00000504289 NBPF1Q3BBV0 1214 aa13.43□□□□□ -0.26
COL1A1-210ENST00000504289 TESK2Q96S53 571 aa13.43□□□□□ -0.26
COL1A1-210ENST00000504289 NOS1P29475 1434 aa13.42□□□□□ -0.26
COL1A1-210ENST00000504289 NPATQ14207 1427 aa13.42□□□□□ -0.26
COL1A1-210ENST00000504289 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
COL1A1-210ENST00000504289 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
COL1A1-210ENST00000504289 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
COL1A1-210ENST00000504289 AGLP35573 1532 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms