RNA–Protein interactions for RNA: ENST00000504287.1

LINC02488-201, Transcript of long intergenic non-protein coding RNA 2488, humanhuman

TSL 2 BASIC

Gene LINC02488, Length 652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02488-201ENST00000504287 PTPREP23469 700 aa15.24■□□□□ 0.03
LINC02488-201ENST00000504287 KCNK17Q96T54 332 aa15.24■□□□□ 0.03
LINC02488-201ENST00000504287 LSM11P83369 360 aaKnown RBP eCLIP15.23■□□□□ 0.03
LINC02488-201ENST00000504287 C6orf132Q5T0Z8 1188 aa15.22■□□□□ 0.03
LINC02488-201ENST00000504287 RBM33Q96EV2 1170 aaKnown RBP15.22■□□□□ 0.03
LINC02488-201ENST00000504287 DMRTA1Q5VZB9 504 aa15.21■□□□□ 0.03
LINC02488-201ENST00000504287 MAP3K7O43318 606 aa15.18■□□□□ 0.02
LINC02488-201ENST00000504287 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
LINC02488-201ENST00000504287 KCNH8Q96L42 1107 aa15.18■□□□□ 0.02
LINC02488-201ENST00000504287 PPP1R3GB7ZBB8 358 aa15.17■□□□□ 0.02
LINC02488-201ENST00000504287 COL9A1P20849 921 aa15.16■□□□□ 0.02
LINC02488-201ENST00000504287 SLC4A5Q9BY07 1137 aa15.15■□□□□ 0.02
LINC02488-201ENST00000504287 TK2O00142 265 aa15.14■□□□□ 0.01
LINC02488-201ENST00000504287 SMYD5Q6GMV2 418 aa15.13■□□□□ 0.01
LINC02488-201ENST00000504287 ZBED2Q9BTP6 218 aa15.13■□□□□ 0.01
LINC02488-201ENST00000504287 ANKRD13DQ6ZTN6 518 aa15.12■□□□□ 0.01
LINC02488-201ENST00000504287 CDHR5Q9HBB8 845 aa15.11■□□□□ 0.01
LINC02488-201ENST00000504287 ADGRD1Q6QNK2 874 aa15.1■□□□□ 0.01
LINC02488-201ENST00000504287 VPS9D1Q9Y2B5 631 aa15.1■□□□□ 0.01
LINC02488-201ENST00000504287 NPDC1Q9NQX5 325 aaPredicted RBP15.09■□□□□ 0.01
LINC02488-201ENST00000504287 RBM26Q5T8P6 1007 aaKnown RBP15.07■□□□□ 0
LINC02488-201ENST00000504287 SPNS2Q8IVW8 549 aa15.07■□□□□ 0
LINC02488-201ENST00000504287 HRO43593 1189 aa15.06■□□□□ 0
LINC02488-201ENST00000504287 CERKQ8TCT0 537 aa15.06■□□□□ 0
LINC02488-201ENST00000504287 PROX2Q3B8N5 592 aa15.03■□□□□ -0
LINC02488-201ENST00000504287 ONECUT3O60422 494 aaPredicted RBP15.02■□□□□ -0
LINC02488-201ENST00000504287 PTGDRQ13258 359 aa15.02■□□□□ -0
LINC02488-201ENST00000504287 BHMG1C9JSJ3 638 aaPredicted RBP15.01□□□□□ -0.01
LINC02488-201ENST00000504287 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
LINC02488-201ENST00000504287 PRSS12P56730 875 aa15□□□□□ -0.01
LINC02488-201ENST00000504287 RBM27Q9P2N5 1060 aaKnown RBP15□□□□□ -0.01
LINC02488-201ENST00000504287 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
LINC02488-201ENST00000504287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.99□□□□□ -0.01
LINC02488-201ENST00000504287 RABGEF1Q9UJ41 708 aa14.99□□□□□ -0.01
LINC02488-201ENST00000504287 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
LINC02488-201ENST00000504287 GPR37O15354 613 aa14.98□□□□□ -0.01
LINC02488-201ENST00000504287 TTC13Q8NBP0 860 aa14.98□□□□□ -0.01
LINC02488-201ENST00000504287 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
LINC02488-201ENST00000504287 TSKSQ9UJT2 592 aa14.98□□□□□ -0.01
LINC02488-201ENST00000504287 FAM198AQ9UFP1 575 aa14.96□□□□□ -0.01
LINC02488-201ENST00000504287 FCHSD2O94868 740 aa14.95□□□□□ -0.02
LINC02488-201ENST00000504287 KIAA1468Q9P260 1216 aa14.94□□□□□ -0.02
LINC02488-201ENST00000504287 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
LINC02488-201ENST00000504287 BCANQ96GW7 911 aa14.92□□□□□ -0.02
LINC02488-201ENST00000504287 PADI6Q6TGC4 694 aa14.91□□□□□ -0.02
LINC02488-201ENST00000504287 GPIHBP1Q8IV16 184 aa14.91□□□□□ -0.02
LINC02488-201ENST00000504287 PLSCR2Q9NRY7 297 aa14.91□□□□□ -0.02
LINC02488-201ENST00000504287 LMOD2Q6P5Q4 547 aa14.9□□□□□ -0.02
LINC02488-201ENST00000504287 NBPF3Q9H094 633 aa14.9□□□□□ -0.02
LINC02488-201ENST00000504287 MYT1LQ9UL68 1186 aa14.9□□□□□ -0.02
LINC02488-201ENST00000504287 HIC1Q14526 733 aa14.89□□□□□ -0.03
LINC02488-201ENST00000504287 PACS2Q86VP3 889 aa14.89□□□□□ -0.03
LINC02488-201ENST00000504287 C3orf80F5H4A9 247 aa14.87□□□□□ -0.03
LINC02488-201ENST00000504287 LAPTM4BQ86VI4 370 aa14.86□□□□□ -0.03
LINC02488-201ENST00000504287 MRPL50Q8N5N7 158 aaKnown RBP14.85□□□□□ -0.03
LINC02488-201ENST00000504287 GNPATO15228 680 aa14.84□□□□□ -0.03
LINC02488-201ENST00000504287 NBPF26B4DH59 902 aa14.82□□□□□ -0.04
LINC02488-201ENST00000504287 TATDN2Q93075 761 aa14.82□□□□□ -0.04
LINC02488-201ENST00000504287 STAC3Q96MF2 364 aa14.82□□□□□ -0.04
LINC02488-201ENST00000504287 SEPT9Q9UHD8 586 aaPredicted RBP14.82□□□□□ -0.04
LINC02488-201ENST00000504287 FECHP22830 423 aa14.81□□□□□ -0.04
LINC02488-201ENST00000504287 RNF166Q96A37 237 aaPredicted RBP14.81□□□□□ -0.04
LINC02488-201ENST00000504287 FAM98CQ17RN3 349 aaKnown RBP14.8□□□□□ -0.04
LINC02488-201ENST00000504287 NUDT18Q6ZVK8 323 aa14.79□□□□□ -0.04
LINC02488-201ENST00000504287 ADGRG1Q9Y653 693 aa14.79□□□□□ -0.04
LINC02488-201ENST00000504287 SMAPO00193 183 aa14.78□□□□□ -0.04
LINC02488-201ENST00000504287 EYA1Q99502 592 aa14.78□□□□□ -0.04
LINC02488-201ENST00000504287 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
LINC02488-201ENST00000504287 ZFRQ96KR1 1074 aaKnown RBP14.76□□□□□ -0.05
LINC02488-201ENST00000504287 ZC3H15Q8WU90 426 aaKnown RBP14.75□□□□□ -0.05
LINC02488-201ENST00000504287 FAM161AQ3B820 660 aa14.72□□□□□ -0.05
LINC02488-201ENST00000504287 WNT2BQ93097 391 aa14.72□□□□□ -0.05
LINC02488-201ENST00000504287 GOLGA8CPA6NN73 597 aa14.71□□□□□ -0.05
LINC02488-201ENST00000504287 KCTD12Q96CX2 325 aaKnown RBP14.71□□□□□ -0.05
LINC02488-201ENST00000504287 ZMYND10O75800 440 aa14.7□□□□□ -0.06
LINC02488-201ENST00000504287 RBM46Q8TBY0 533 aaKnown RBP14.7□□□□□ -0.06
LINC02488-201ENST00000504287 OATP04181 439 aa14.69□□□□□ -0.06
LINC02488-201ENST00000504287 MAP2K5Q13163 448 aa14.69□□□□□ -0.06
LINC02488-201ENST00000504287 THSD4Q6ZMP0 1018 aa14.69□□□□□ -0.06
LINC02488-201ENST00000504287 ANKK1Q8NFD2 765 aa14.69□□□□□ -0.06
LINC02488-201ENST00000504287 PXYLP1Q8TE99 480 aa14.69□□□□□ -0.06
LINC02488-201ENST00000504287 METTL3Q86U44 580 aaKnown RBP14.68□□□□□ -0.06
LINC02488-201ENST00000504287 BARGINQ6ZT62 677 aa14.67□□□□□ -0.06
LINC02488-201ENST00000504287 SOWAHBA6NEL2 793 aa14.66□□□□□ -0.06
LINC02488-201ENST00000504287 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
LINC02488-201ENST00000504287 IRF6O14896 467 aa14.65□□□□□ -0.06
LINC02488-201ENST00000504287 SAMD7Q7Z3H4 446 aa14.64□□□□□ -0.07
LINC02488-201ENST00000504287 RCCD1A6NED2 376 aa14.63□□□□□ -0.07
LINC02488-201ENST00000504287 BCAMP50895 628 aa14.63□□□□□ -0.07
LINC02488-201ENST00000504287 DNAJB2P25686 324 aa14.62□□□□□ -0.07
LINC02488-201ENST00000504287 LRCH3Q96II8 777 aa14.62□□□□□ -0.07
LINC02488-201ENST00000504287 PHOX2BQ99453 314 aa14.62□□□□□ -0.07
LINC02488-201ENST00000504287 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.62□□□□□ -0.07
LINC02488-201ENST00000504287 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.61□□□□□ -0.07
LINC02488-201ENST00000504287 TMEM134Q9H6X4 195 aa14.61□□□□□ -0.07
LINC02488-201ENST00000504287 HCSTQ9UBK5 93 aa14.61□□□□□ -0.07
LINC02488-201ENST00000504287 SWT1Q5T5J6 900 aaKnown RBP14.59□□□□□ -0.07
LINC02488-201ENST00000504287 CCDC102AQ96A19 550 aa14.58□□□□□ -0.08
LINC02488-201ENST00000504287 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
LINC02488-201ENST00000504287 PTPN5P54829 565 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms