RNA–Protein interactions for RNA: ENST00000503850.1

APBB3-207, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best)

Gene APBB3, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-207ENST00000503850 PREX1Q8TCU6 1659 aa31.87■■■□□ 2.69
APBB3-207ENST00000503850 CLTCQ00610 1675 aaKnown RBP31.86■■■□□ 2.69
APBB3-207ENST00000503850 ERBINQ96RT1 1412 aa31.86■■■□□ 2.69
APBB3-207ENST00000503850 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.86■■■□□ 2.69
APBB3-207ENST00000503850 RNF17Q9BXT8 1623 aaKnown RBP31.85■■■□□ 2.69
APBB3-207ENST00000503850 KDM5DQ9BY66 1539 aa31.85■■■□□ 2.69
APBB3-207ENST00000503850 ADGRL2O95490 1459 aa31.84■■■□□ 2.69
APBB3-207ENST00000503850 UHRF1BP1Q6BDS2 1440 aa31.83■■■□□ 2.69
APBB3-207ENST00000503850 NCOA1Q15788 1441 aa31.81■■■□□ 2.68
APBB3-207ENST00000503850 WASHC2CQ9Y4E1 1318 aa31.79■■■□□ 2.68
APBB3-207ENST00000503850 RRP7BPQ9NSQ0 103 aa31.79■■■□□ 2.68
APBB3-207ENST00000503850 ZC3H13Q5T200 1668 aaKnown RBP31.76■■■□□ 2.68
APBB3-207ENST00000503850 CHIC2Q9UKJ5 165 aa31.76■■■□□ 2.67
APBB3-207ENST00000503850 PPARGC1BQ86YN6 1023 aaKnown RBP31.74■■■□□ 2.67
APBB3-207ENST00000503850 PTPRKQ15262 1439 aa31.73■■■□□ 2.67
APBB3-207ENST00000503850 PZPP20742 1482 aa31.71■■■□□ 2.67
APBB3-207ENST00000503850 ROCK1Q13464 1354 aa31.7■■■□□ 2.67
APBB3-207ENST00000503850 RRBP1Q9P2E9 1410 aaKnown RBP31.7■■■□□ 2.67
APBB3-207ENST00000503850 PRDM15P57071 1507 aaPredicted RBP31.7■■■□□ 2.66
APBB3-207ENST00000503850 MROH1Q8NDA8 1641 aa31.68■■■□□ 2.66
APBB3-207ENST00000503850 ABCC3O15438 1527 aa31.67■■■□□ 2.66
APBB3-207ENST00000503850 DEPDC5O75140 1603 aa31.66■■■□□ 2.66
APBB3-207ENST00000503850 KANK1Q14678 1352 aa31.66■■■□□ 2.66
APBB3-207ENST00000503850 HSPA2P54652 639 aa31.64■■■□□ 2.66
APBB3-207ENST00000503850 ANKRD50Q9ULJ7 1429 aa31.63■■■□□ 2.65
APBB3-207ENST00000503850 ZNF142P52746 1687 aaPredicted RBP31.59■■■□□ 2.65
APBB3-207ENST00000503850 MYO3AQ8NEV4 1616 aa31.59■■■□□ 2.65
APBB3-207ENST00000503850 TNRQ92752 1358 aa31.57■■■□□ 2.64
APBB3-207ENST00000503850 ARHGAP31Q2M1Z3 1444 aa31.57■■■□□ 2.64
APBB3-207ENST00000503850 CAMSAP1Q5T5Y3 1602 aa31.56■■■□□ 2.64
APBB3-207ENST00000503850 CEP170BQ9Y4F5 1589 aaPredicted RBP31.55■■■□□ 2.64
APBB3-207ENST00000503850 CEP152O94986 1710 aa31.55■■■□□ 2.64
APBB3-207ENST00000503850 LMTK2Q8IWU2 1503 aa31.54■■■□□ 2.64
APBB3-207ENST00000503850 DMRT2Q9Y5R5 561 aa31.54■■■□□ 2.64
APBB3-207ENST00000503850 VWDEQ8N2E2 1590 aa31.53■■■□□ 2.64
APBB3-207ENST00000503850 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.53■■■□□ 2.64
APBB3-207ENST00000503850 A2ML1A8K2U0 1454 aa31.52■■■□□ 2.64
APBB3-207ENST00000503850 NLRP1Q9C000 1473 aa31.52■■■□□ 2.64
APBB3-207ENST00000503850 SPATA31D1Q6ZQQ2 1576 aa31.51■■■□□ 2.64
APBB3-207ENST00000503850 FBXO31Q5XUX0 539 aaPredicted RBP31.51■■■□□ 2.63
APBB3-207ENST00000503850 ITGAEP38570 1179 aa31.5■■■□□ 2.63
APBB3-207ENST00000503850 ERVK-7P63135 1459 aa31.47■■■□□ 2.63
APBB3-207ENST00000503850 PLA2R1Q13018 1463 aa31.47■■■□□ 2.63
APBB3-207ENST00000503850 UNC13BO14795 1591 aa31.44■■■□□ 2.62
APBB3-207ENST00000503850 STRCQ7RTU9 1775 aa31.43■■■□□ 2.62
APBB3-207ENST00000503850 PTPRTO14522 1441 aa31.41■■■□□ 2.62
APBB3-207ENST00000503850 PKD2Q13563 968 aa31.4■■■□□ 2.62
APBB3-207ENST00000503850 EFCAB6Q5THR3 1501 aa31.39■■■□□ 2.62
APBB3-207ENST00000503850 RPRD2Q5VT52 1461 aaKnown RBP31.39■■■□□ 2.62
APBB3-207ENST00000503850 THEMISQ8N1K5 641 aaPredicted RBP31.37■■■□□ 2.61
APBB3-207ENST00000503850 UGGT1Q9NYU2 1555 aa31.36■■■□□ 2.61
APBB3-207ENST00000503850 TET3O43151 1660 aa31.35■■■□□ 2.61
APBB3-207ENST00000503850 CFAP65Q6ZU64 1925 aaKnown RBP31.32■■■□□ 2.6
APBB3-207ENST00000503850 IQGAP3Q86VI3 1631 aa31.31■■■□□ 2.6
APBB3-207ENST00000503850 GCC2Q8IWJ2 1684 aa31.31■■■□□ 2.6
APBB3-207ENST00000503850 HFM1A2PYH4 1435 aa31.3■■■□□ 2.6
APBB3-207ENST00000503850 NAIPQ13075 1403 aa31.3■■■□□ 2.6
APBB3-207ENST00000503850 NOS1P29475 1434 aa31.29■■■□□ 2.6
APBB3-207ENST00000503850 NUP155O75694 1391 aa31.29■■■□□ 2.6
APBB3-207ENST00000503850 ANKLE2Q86XL3 938 aa31.25■■■□□ 2.59
APBB3-207ENST00000503850 SLC52A1Q9NWF4 448 aa31.25■■■□□ 2.59
APBB3-207ENST00000503850 NCKAP5LQ9HCH0 1330 aa31.24■■■□□ 2.59
APBB3-207ENST00000503850 KDM5AP29375 1690 aaKnown RBP31.23■■■□□ 2.59
APBB3-207ENST00000503850 POLR1AO95602 1720 aaPredicted RBP31.21■■■□□ 2.59
APBB3-207ENST00000503850 UBR1Q8IWV7 1749 aa31.21■■■□□ 2.59
APBB3-207ENST00000503850 SYNMO15061 1565 aa31.19■■■□□ 2.58
APBB3-207ENST00000503850 ACIN1Q9UKV3 1341 aaKnown RBP31.17■■■□□ 2.58
APBB3-207ENST00000503850 STAG3Q9UJ98 1225 aa31.16■■■□□ 2.58
APBB3-207ENST00000503850 PIK3C2BO00750 1634 aa31.16■■■□□ 2.58
APBB3-207ENST00000503850 E9PCH4 1651 aa31.16■■■□□ 2.58
APBB3-207ENST00000503850 MED14O60244 1454 aa31.15■■■□□ 2.58
APBB3-207ENST00000503850 IDI1Q13907 227 aa31.15■■■□□ 2.58
APBB3-207ENST00000503850 SLIT1O75093 1534 aa31.14■■■□□ 2.58
APBB3-207ENST00000503850 ARHGAP23Q9P227 1491 aa31.13■■■□□ 2.57
APBB3-207ENST00000503850 NEURL4Q96JN8 1562 aa31.12■■■□□ 2.57
APBB3-207ENST00000503850 ADGRB3O60242 1522 aa31.1■■■□□ 2.57
APBB3-207ENST00000503850 EID1Q9Y6B2 187 aa31.09■■■□□ 2.57
APBB3-207ENST00000503850 NPHP4O75161 1426 aaPredicted RBP31.08■■■□□ 2.57
APBB3-207ENST00000503850 SCAF11Q99590 1463 aaKnown RBP31.08■■■□□ 2.57
APBB3-207ENST00000503850 TMEM2Q9UHN6 1383 aa31.07■■■□□ 2.56
APBB3-207ENST00000503850 CERKQ8TCT0 537 aa31.07■■■□□ 2.56
APBB3-207ENST00000503850 TRIM52Q96A61 297 aa31.03■■■□□ 2.56
APBB3-207ENST00000503850 IQGAP1P46940 1657 aa31.03■■■□□ 2.56
APBB3-207ENST00000503850 LTBP4Q8N2S1 1624 aa31.02■■■□□ 2.56
APBB3-207ENST00000503850 TXNDC2Q86VQ3 553 aa31.02■■■□□ 2.56
APBB3-207ENST00000503850 FBXO41Q8TF61 875 aa31.02■■■□□ 2.56
APBB3-207ENST00000503850 HDGFP51858 240 aaKnown RBP31■■■□□ 2.55
APBB3-207ENST00000503850 IQSEC2Q5JU85 1478 aa31■■■□□ 2.55
APBB3-207ENST00000503850 SPHKAPQ2M3C7 1700 aa30.99■■■□□ 2.55
APBB3-207ENST00000503850 SETD5Q9C0A6 1442 aa30.97■■■□□ 2.55
APBB3-207ENST00000503850 TMEM131LA2VDJ0 1609 aa30.96■■■□□ 2.55
APBB3-207ENST00000503850 LTKP29376 864 aa30.96■■■□□ 2.55
APBB3-207ENST00000503850 SLC4A1APQ9BWU0 796 aaKnown RBP30.96■■■□□ 2.55
APBB3-207ENST00000503850 ZNF335Q9H4Z2 1342 aaPredicted RBP30.96■■■□□ 2.55
APBB3-207ENST00000503850 ILDR1Q86SU0 546 aaPredicted RBP30.92■■■□□ 2.54
APBB3-207ENST00000503850 TRPM2O94759 1503 aa30.92■■■□□ 2.54
APBB3-207ENST00000503850 CPS1P31327 1500 aa30.92■■■□□ 2.54
APBB3-207ENST00000503850 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.91■■■□□ 2.54
APBB3-207ENST00000503850 ZFYVE9O95405 1425 aa30.89■■■□□ 2.53
APBB3-207ENST00000503850 CHGAP10645 457 aaKnown RBP30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms