RNA–Protein interactions for RNA: ENST00000503678.5

SMN2-204, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-204ENST00000503678 Q6ZNB5 142 aa9.28□□□□□ -0.92
SMN2-204ENST00000503678 UPF1Q92900 1129 aaKnown RBP eCLIP9.28□□□□□ -0.92
SMN2-204ENST00000503678 JPH4Q96JJ6 628 aa9.25□□□□□ -0.93
SMN2-204ENST00000503678 ERICH6Q7L0X2 663 aa9.24□□□□□ -0.93
SMN2-204ENST00000503678 ZDHHC16Q969W1 377 aa9.24□□□□□ -0.93
SMN2-204ENST00000503678 GTF3C3Q9Y5Q9 886 aa9.24□□□□□ -0.93
SMN2-204ENST00000503678 TMEM132AQ24JP5 1023 aa9.23□□□□□ -0.93
SMN2-204ENST00000503678 KCNV2Q8TDN2 545 aa9.23□□□□□ -0.93
SMN2-204ENST00000503678 ADAM33Q9BZ11 813 aa9.23□□□□□ -0.93
SMN2-204ENST00000503678 CADPS2Q86UW7 1296 aa9.22□□□□□ -0.93
SMN2-204ENST00000503678 ANKK1Q8NFD2 765 aa9.22□□□□□ -0.93
SMN2-204ENST00000503678 RABGEF1Q9UJ41 708 aa9.22□□□□□ -0.93
SMN2-204ENST00000503678 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
SMN2-204ENST00000503678 CRISPLD2Q9H0B8 497 aa9.21□□□□□ -0.94
SMN2-204ENST00000503678 LAPTM4AQ15012 233 aa9.2□□□□□ -0.94
SMN2-204ENST00000503678 PPP1R15BQ5SWA1 713 aa9.2□□□□□ -0.94
SMN2-204ENST00000503678 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMN2-204ENST00000503678 TIMELESSQ9UNS1 1208 aa9.2□□□□□ -0.94
SMN2-204ENST00000503678 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
SMN2-204ENST00000503678 EVI5O60447 810 aa9.19□□□□□ -0.94
SMN2-204ENST00000503678 LMOD2Q6P5Q4 547 aa9.19□□□□□ -0.94
SMN2-204ENST00000503678 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
SMN2-204ENST00000503678 KCNC4Q03721 635 aa9.17□□□□□ -0.94
SMN2-204ENST00000503678 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
SMN2-204ENST00000503678 PPP1R3GB7ZBB8 358 aa9.16□□□□□ -0.94
SMN2-204ENST00000503678 PDE4AP27815 886 aa9.16□□□□□ -0.94
SMN2-204ENST00000503678 BCAMP50895 628 aa9.15□□□□□ -0.94
SMN2-204ENST00000503678 TRAF7Q6Q0C0 670 aa9.15□□□□□ -0.94
SMN2-204ENST00000503678 ARHGEF1Q92888 912 aaKnown RBP9.15□□□□□ -0.94
SMN2-204ENST00000503678 PROX2Q3B8N5 592 aa9.12□□□□□ -0.95
SMN2-204ENST00000503678 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
SMN2-204ENST00000503678 LCE2BO14633 110 aa9.11□□□□□ -0.95
SMN2-204ENST00000503678 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
SMN2-204ENST00000503678 MAP3K9P80192 1104 aa9.11□□□□□ -0.95
SMN2-204ENST00000503678 LARP6Q9BRS8 491 aaKnown RBP9.11□□□□□ -0.95
SMN2-204ENST00000503678 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
SMN2-204ENST00000503678 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
SMN2-204ENST00000503678 NCKAP5LQ9HCH0 1330 aa9.1□□□□□ -0.95
SMN2-204ENST00000503678 GFRA3O60609 400 aa9.1□□□□□ -0.95
SMN2-204ENST00000503678 COL9A1P20849 921 aa9.1□□□□□ -0.95
SMN2-204ENST00000503678 E2F4Q16254 413 aa9.1□□□□□ -0.95
SMN2-204ENST00000503678 DDX27Q96GQ7 796 aaKnown RBP9.09□□□□□ -0.95
SMN2-204ENST00000503678 KIAA1468Q9P260 1216 aa9.09□□□□□ -0.95
SMN2-204ENST00000503678 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
SMN2-204ENST00000503678 TYW1BQ6NUM6 668 aa9.05□□□□□ -0.96
SMN2-204ENST00000503678 TSR3Q9UJK0 312 aaKnown RBP9.05□□□□□ -0.96
SMN2-204ENST00000503678 TESPA1A2RU30 521 aaPredicted RBP9.04□□□□□ -0.96
SMN2-204ENST00000503678 PHF14O94880 888 aa9.04□□□□□ -0.96
SMN2-204ENST00000503678 ZC3H15Q8WU90 426 aaKnown RBP9.04□□□□□ -0.96
SMN2-204ENST00000503678 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
SMN2-204ENST00000503678 NRG2O14511 850 aaPredicted RBP9.02□□□□□ -0.97
SMN2-204ENST00000503678 FAM98CQ17RN3 349 aaKnown RBP9.02□□□□□ -0.97
SMN2-204ENST00000503678 SEMA3EO15041 775 aa9.01□□□□□ -0.97
SMN2-204ENST00000503678 MFSD10Q14728 455 aa9.01□□□□□ -0.97
SMN2-204ENST00000503678 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
SMN2-204ENST00000503678 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
SMN2-204ENST00000503678 SMYD5Q6GMV2 418 aa9□□□□□ -0.97
SMN2-204ENST00000503678 LRCH3Q96II8 777 aa9□□□□□ -0.97
SMN2-204ENST00000503678 EMILIN3Q9NT22 766 aa9□□□□□ -0.97
SMN2-204ENST00000503678 SEPT9Q9UHD8 586 aaPredicted RBP9□□□□□ -0.97
SMN2-204ENST00000503678 PRKD2Q9BZL6 878 aa8.99□□□□□ -0.97
SMN2-204ENST00000503678 HPS5Q9UPZ3 1129 aa8.99□□□□□ -0.97
SMN2-204ENST00000503678 ARIH1Q9Y4X5 557 aaPredicted RBP8.99□□□□□ -0.97
SMN2-204ENST00000503678 TRIM6-TRIM34B2RNG4 842 aa8.98□□□□□ -0.97
SMN2-204ENST00000503678 C14orf37Q86TY3 774 aa8.98□□□□□ -0.97
SMN2-204ENST00000503678 ARXQ96QS3 562 aa8.98□□□□□ -0.97
SMN2-204ENST00000503678 EPAS1Q99814 870 aa8.97□□□□□ -0.97
SMN2-204ENST00000503678 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
SMN2-204ENST00000503678 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
SMN2-204ENST00000503678 ZNF787Q6DD87 383 aa8.96□□□□□ -0.98
SMN2-204ENST00000503678 TJAP1Q5JTD0 557 aa8.95□□□□□ -0.98
SMN2-204ENST00000503678 PPP4CP60510 307 aa8.94□□□□□ -0.98
SMN2-204ENST00000503678 SLC24A3Q9HC58 644 aa8.94□□□□□ -0.98
SMN2-204ENST00000503678 ZMYND10O75800 440 aa8.93□□□□□ -0.98
SMN2-204ENST00000503678 CAMK2BQ13554 666 aa8.92□□□□□ -0.98
SMN2-204ENST00000503678 PPP1R18Q6NYC8 613 aa8.91□□□□□ -0.98
SMN2-204ENST00000503678 PACS2Q86VP3 889 aa8.91□□□□□ -0.98
SMN2-204ENST00000503678 ZNF775Q96BV0 537 aaPredicted RBP8.9□□□□□ -0.98
SMN2-204ENST00000503678 IL21Q9HBE4 155 aa8.89□□□□□ -0.99
SMN2-204ENST00000503678 BARGINQ6ZT62 677 aa8.88□□□□□ -0.99
SMN2-204ENST00000503678 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
SMN2-204ENST00000503678 PDZRN3Q9UPQ7 1066 aa8.88□□□□□ -0.99
SMN2-204ENST00000503678 DPYSL4O14531 572 aa8.87□□□□□ -0.99
SMN2-204ENST00000503678 MTRQ99707 1265 aa8.87□□□□□ -0.99
SMN2-204ENST00000503678 RBM33Q96EV2 1170 aaKnown RBP8.86□□□□□ -0.99
SMN2-204ENST00000503678 DAXXQ9UER7 740 aaPredicted RBP8.86□□□□□ -0.99
SMN2-204ENST00000503678 TSKSQ9UJT2 592 aa8.86□□□□□ -0.99
SMN2-204ENST00000503678 SAMD7Q7Z3H4 446 aa8.83□□□□□ -1
SMN2-204ENST00000503678 GPIHBP1Q8IV16 184 aa8.82□□□□□ -1
SMN2-204ENST00000503678 ZNF516Q92618 1163 aa8.82□□□□□ -1
SMN2-204ENST00000503678 AK7Q96M32 723 aa8.82□□□□□ -1
SMN2-204ENST00000503678 HOMEZQ8IX15 550 aa8.81□□□□□ -1
SMN2-204ENST00000503678 DDX12PQ92771 950 aa8.8□□□□□ -1
SMN2-204ENST00000503678 GGCXP38435 758 aa8.79□□□□□ -1
SMN2-204ENST00000503678 EN1Q05925 392 aaPredicted RBP8.79□□□□□ -1
SMN2-204ENST00000503678 SPDYE16A6NNV3 312 aaPredicted RBP8.78□□□□□ -1
SMN2-204ENST00000503678 MLLT3P42568 568 aaPredicted RBP8.78□□□□□ -1
SMN2-204ENST00000503678 RBM26Q5T8P6 1007 aaKnown RBP8.78□□□□□ -1
SMN2-204ENST00000503678 KRI1Q8N9T8 703 aaKnown RBP8.78□□□□□ -1
SMN2-204ENST00000503678 CDCA7LQ96GN5 454 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms