RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 DEPDC5O75140 1603 aa10.23□□□□□ -0.77
TOPBP1-203ENST00000503464 CLSPNQ9HAW4 1339 aa10.23□□□□□ -0.77
TOPBP1-203ENST00000503464 ERBINQ96RT1 1412 aa10.22□□□□□ -0.77
TOPBP1-203ENST00000503464 MLH3Q9UHC1 1453 aa10.22□□□□□ -0.77
TOPBP1-203ENST00000503464 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
TOPBP1-203ENST00000503464 ZEB1P37275 1124 aaPredicted RBP10.21□□□□□ -0.77
TOPBP1-203ENST00000503464 SPAG9O60271 1321 aaKnown RBP10.21□□□□□ -0.78
TOPBP1-203ENST00000503464 ZMYM4Q5VZL5 1548 aa10.21□□□□□ -0.78
TOPBP1-203ENST00000503464 DIP2CQ9Y2E4 1556 aa10.21□□□□□ -0.78
TOPBP1-203ENST00000503464 IQGAP3Q86VI3 1631 aa10.21□□□□□ -0.78
TOPBP1-203ENST00000503464 MROH1Q8NDA8 1641 aa10.21□□□□□ -0.78
TOPBP1-203ENST00000503464 BCORL1Q5H9F3 1711 aa10.2□□□□□ -0.78
TOPBP1-203ENST00000503464 TEX14Q8IWB6 1497 aa10.2□□□□□ -0.78
TOPBP1-203ENST00000503464 COL17A1Q9UMD9 1497 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-203ENST00000503464 RNF17Q9BXT8 1623 aaKnown RBP10.18□□□□□ -0.78
TOPBP1-203ENST00000503464 FAM135AQ9P2D6 1515 aa10.18□□□□□ -0.78
TOPBP1-203ENST00000503464 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
TOPBP1-203ENST00000503464 SIGLEC1Q9BZZ2 1709 aa10.17□□□□□ -0.78
TOPBP1-203ENST00000503464 RAPGEF3O95398 923 aa10.17□□□□□ -0.78
TOPBP1-203ENST00000503464 MPHOSPH9Q99550 1183 aa10.17□□□□□ -0.78
TOPBP1-203ENST00000503464 PRDM15P57071 1507 aaPredicted RBP10.17□□□□□ -0.78
TOPBP1-203ENST00000503464 TRIM52Q96A61 297 aa10.16□□□□□ -0.78
TOPBP1-203ENST00000503464 A2MP01023 1474 aa10.16□□□□□ -0.78
TOPBP1-203ENST00000503464 YEATS2Q9ULM3 1422 aa10.16□□□□□ -0.78
TOPBP1-203ENST00000503464 HOXD11P31277 338 aaPredicted RBP10.15□□□□□ -0.78
TOPBP1-203ENST00000503464 SIN3AQ96ST3 1273 aa10.15□□□□□ -0.78
TOPBP1-203ENST00000503464 NUP155O75694 1391 aa10.14□□□□□ -0.79
TOPBP1-203ENST00000503464 DHX29Q7Z478 1369 aaKnown RBP10.14□□□□□ -0.79
TOPBP1-203ENST00000503464 ANKRD30BQ9BXX2 1392 aa10.14□□□□□ -0.79
TOPBP1-203ENST00000503464 CEP152O94986 1710 aa10.14□□□□□ -0.79
TOPBP1-203ENST00000503464 E9PCH4 1651 aa10.14□□□□□ -0.79
TOPBP1-203ENST00000503464 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
TOPBP1-203ENST00000503464 TET3O43151 1660 aa10.13□□□□□ -0.79
TOPBP1-203ENST00000503464 ARHGEF40Q8TER5 1519 aa10.12□□□□□ -0.79
TOPBP1-203ENST00000503464 SLC4A1APQ9BWU0 796 aaKnown RBP10.12□□□□□ -0.79
TOPBP1-203ENST00000503464 REREQ9P2R6 1566 aa10.12□□□□□ -0.79
TOPBP1-203ENST00000503464 PLA2R1Q13018 1463 aa10.1□□□□□ -0.79
TOPBP1-203ENST00000503464 RPRD2Q5VT52 1461 aaKnown RBP10.1□□□□□ -0.79
TOPBP1-203ENST00000503464 EFCAB6Q5THR3 1501 aa10.09□□□□□ -0.79
TOPBP1-203ENST00000503464 LMTK2Q8IWU2 1503 aa10.09□□□□□ -0.79
TOPBP1-203ENST00000503464 PKD2Q13563 968 aa10.09□□□□□ -0.79
TOPBP1-203ENST00000503464 SPHKAPQ2M3C7 1700 aa10.09□□□□□ -0.79
TOPBP1-203ENST00000503464 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
TOPBP1-203ENST00000503464 ATP10AO60312 1499 aa10.08□□□□□ -0.8
TOPBP1-203ENST00000503464 ABCC3O15438 1527 aa10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 ZC3H13Q5T200 1668 aaKnown RBP10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 KIF3BO15066 747 aa10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 AGLP35573 1532 aa10.07□□□□□ -0.8
TOPBP1-203ENST00000503464 CLTCL1P53675 1640 aa10.05□□□□□ -0.8
TOPBP1-203ENST00000503464 TRPM2O94759 1503 aa10.05□□□□□ -0.8
TOPBP1-203ENST00000503464 PTPRTO14522 1441 aa10.04□□□□□ -0.8
TOPBP1-203ENST00000503464 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
TOPBP1-203ENST00000503464 TONSLQ96HA7 1378 aa10.02□□□□□ -0.8
TOPBP1-203ENST00000503464 UGGT1Q9NYU2 1555 aa10.02□□□□□ -0.81
TOPBP1-203ENST00000503464 CFAP65Q6ZU64 1925 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-203ENST00000503464 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.81
TOPBP1-203ENST00000503464 CLTCQ00610 1675 aaKnown RBP10.02□□□□□ -0.81
TOPBP1-203ENST00000503464 KANK1Q14678 1352 aa10.01□□□□□ -0.81
TOPBP1-203ENST00000503464 NPATQ14207 1427 aa10.01□□□□□ -0.81
TOPBP1-203ENST00000503464 MROH2AA6NES4 1674 aa10.01□□□□□ -0.81
TOPBP1-203ENST00000503464 SYNMO15061 1565 aa10.01□□□□□ -0.81
TOPBP1-203ENST00000503464 PPP1R15AO75807 674 aaPredicted RBP10□□□□□ -0.81
TOPBP1-203ENST00000503464 L3MBTL2Q969R5 705 aa10□□□□□ -0.81
TOPBP1-203ENST00000503464 PIK3C2BO00750 1634 aa10□□□□□ -0.81
TOPBP1-203ENST00000503464 PREX1Q8TCU6 1659 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 GGT6Q6P531 493 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 IFT172Q9UG01 1749 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 ARHGAP31Q2M1Z3 1444 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 SPATA31E1Q6ZUB1 1445 aa9.99□□□□□ -0.81
TOPBP1-203ENST00000503464 KIF1BO60333 1816 aa9.98□□□□□ -0.81
TOPBP1-203ENST00000503464 NEURL4Q96JN8 1562 aa9.97□□□□□ -0.81
TOPBP1-203ENST00000503464 NOS1P29475 1434 aa9.97□□□□□ -0.81
TOPBP1-203ENST00000503464 ADGRB3O60242 1522 aa9.96□□□□□ -0.82
TOPBP1-203ENST00000503464 MYO5BQ9ULV0 1848 aa9.96□□□□□ -0.82
TOPBP1-203ENST00000503464 NBPF8Q3BBV2 869 aa9.95□□□□□ -0.82
TOPBP1-203ENST00000503464 WASHC2CQ9Y4E1 1318 aa9.95□□□□□ -0.82
TOPBP1-203ENST00000503464 UHRF1BP1Q6BDS2 1440 aa9.95□□□□□ -0.82
TOPBP1-203ENST00000503464 TRPM1Q7Z4N2 1603 aa9.94□□□□□ -0.82
TOPBP1-203ENST00000503464 MADDQ8WXG6 1647 aa9.94□□□□□ -0.82
TOPBP1-203ENST00000503464 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
TOPBP1-203ENST00000503464 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
TOPBP1-203ENST00000503464 PPLO60437 1756 aa9.93□□□□□ -0.82
TOPBP1-203ENST00000503464 SPATA31D1Q6ZQQ2 1576 aa9.93□□□□□ -0.82
TOPBP1-203ENST00000503464 ERVK-7P63135 1459 aa9.93□□□□□ -0.82
TOPBP1-203ENST00000503464 RALGAPBQ86X10 1494 aa9.91□□□□□ -0.82
TOPBP1-203ENST00000503464 PRAG1Q86YV5 1406 aa9.91□□□□□ -0.82
TOPBP1-203ENST00000503464 C3P01024 1663 aa9.91□□□□□ -0.82
TOPBP1-203ENST00000503464 TMEM131LA2VDJ0 1609 aa9.91□□□□□ -0.82
TOPBP1-203ENST00000503464 ZNF316A6NFI3 1004 aaPredicted RBP9.9□□□□□ -0.82
TOPBP1-203ENST00000503464 RNF216Q9NWF9 866 aaPredicted RBP9.9□□□□□ -0.82
TOPBP1-203ENST00000503464 MLECQ14165 292 aa9.89□□□□□ -0.83
TOPBP1-203ENST00000503464 LAMC1P11047 1609 aa9.89□□□□□ -0.83
TOPBP1-203ENST00000503464 NEXMIFQ5QGS0 1516 aa9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 ADAMTSL3P82987 1691 aa9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 MYOM2P54296 1465 aa9.88□□□□□ -0.83
TOPBP1-203ENST00000503464 NRXN1Q9ULB1 1477 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms