RNA–Protein interactions for RNA: ENST00000503420.5

CCHCR1-217, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-217ENST00000503420 KIF15Q9NS87 1388 aa33.91■■■■□ 3.02
CCHCR1-217ENST00000503420 PPARGC1BQ86YN6 1023 aaKnown RBP33.9■■■■□ 3.02
CCHCR1-217ENST00000503420 DUOX2Q9NRD8 1548 aa33.89■■■■□ 3.02
CCHCR1-217ENST00000503420 ANKRD30AQ9BXX3 1397 aa33.88■■■■□ 3.01
CCHCR1-217ENST00000503420 DNMT1P26358 1616 aaKnown RBP33.88■■■■□ 3.01
CCHCR1-217ENST00000503420 FAM135AQ9P2D6 1515 aa33.86■■■■□ 3.01
CCHCR1-217ENST00000503420 PTPRKQ15262 1439 aa33.86■■■■□ 3.01
CCHCR1-217ENST00000503420 KDM5DQ9BY66 1539 aa33.85■■■■□ 3.01
CCHCR1-217ENST00000503420 DMRT2Q9Y5R5 561 aa33.84■■■■□ 3.01
CCHCR1-217ENST00000503420 CROCC2H7BZ55 1655 aa33.83■■■■□ 3.01
CCHCR1-217ENST00000503420 EIF2AK4Q9P2K8 1649 aaKnown RBP33.8■■■■□ 3
CCHCR1-217ENST00000503420 ERBINQ96RT1 1412 aa33.79■■■■□ 3
CCHCR1-217ENST00000503420 FBXO31Q5XUX0 539 aaPredicted RBP33.78■■■■□ 3
CCHCR1-217ENST00000503420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.76■■■□□ 2.99
CCHCR1-217ENST00000503420 NCOA1Q15788 1441 aa33.76■■■□□ 2.99
CCHCR1-217ENST00000503420 RNF17Q9BXT8 1623 aaKnown RBP33.75■■■□□ 2.99
CCHCR1-217ENST00000503420 PZPP20742 1482 aa33.74■■■□□ 2.99
CCHCR1-217ENST00000503420 TNRQ92752 1358 aa33.72■■■□□ 2.99
CCHCR1-217ENST00000503420 KANK1Q14678 1352 aa33.72■■■□□ 2.99
CCHCR1-217ENST00000503420 ABCC3O15438 1527 aa33.69■■■□□ 2.98
CCHCR1-217ENST00000503420 ADGRL2O95490 1459 aa33.68■■■□□ 2.98
CCHCR1-217ENST00000503420 ITGAEP38570 1179 aa33.66■■■□□ 2.98
CCHCR1-217ENST00000503420 MYO3AQ8NEV4 1616 aa33.65■■■□□ 2.98
CCHCR1-217ENST00000503420 ZC3H13Q5T200 1668 aaKnown RBP33.64■■■□□ 2.98
CCHCR1-217ENST00000503420 CEP170BQ9Y4F5 1589 aaPredicted RBP33.63■■■□□ 2.97
CCHCR1-217ENST00000503420 CAMSAP1Q5T5Y3 1602 aa33.62■■■□□ 2.97
CCHCR1-217ENST00000503420 A2ML1A8K2U0 1454 aa33.62■■■□□ 2.97
CCHCR1-217ENST00000503420 MROH1Q8NDA8 1641 aa33.61■■■□□ 2.97
CCHCR1-217ENST00000503420 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.6■■■□□ 2.97
CCHCR1-217ENST00000503420 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
CCHCR1-217ENST00000503420 PKD2Q13563 968 aa33.6■■■□□ 2.97
CCHCR1-217ENST00000503420 ILDR1Q86SU0 546 aaPredicted RBP33.59■■■□□ 2.97
CCHCR1-217ENST00000503420 PTPRTO14522 1441 aa33.59■■■□□ 2.97
CCHCR1-217ENST00000503420 ANKRD50Q9ULJ7 1429 aa33.59■■■□□ 2.97
CCHCR1-217ENST00000503420 NCKAP5LQ9HCH0 1330 aa33.58■■■□□ 2.97
CCHCR1-217ENST00000503420 PRDM15P57071 1507 aaPredicted RBP33.58■■■□□ 2.97
CCHCR1-217ENST00000503420 THEMISQ8N1K5 641 aaPredicted RBP33.57■■■□□ 2.96
CCHCR1-217ENST00000503420 ZNF142P52746 1687 aaPredicted RBP33.57■■■□□ 2.96
CCHCR1-217ENST00000503420 ROCK1Q13464 1354 aa33.55■■■□□ 2.96
CCHCR1-217ENST00000503420 NLRP1Q9C000 1473 aa33.55■■■□□ 2.96
CCHCR1-217ENST00000503420 CEP152O94986 1710 aa33.53■■■□□ 2.96
CCHCR1-217ENST00000503420 PLA2R1Q13018 1463 aa33.53■■■□□ 2.96
CCHCR1-217ENST00000503420 ARHGAP31Q2M1Z3 1444 aa33.52■■■□□ 2.96
CCHCR1-217ENST00000503420 ERVK-7P63135 1459 aa33.51■■■□□ 2.96
CCHCR1-217ENST00000503420 DEPDC5O75140 1603 aa33.51■■■□□ 2.96
CCHCR1-217ENST00000503420 SPATA31D1Q6ZQQ2 1576 aa33.48■■■□□ 2.95
CCHCR1-217ENST00000503420 CERKQ8TCT0 537 aa33.48■■■□□ 2.95
CCHCR1-217ENST00000503420 FBXO41Q8TF61 875 aa33.47■■■□□ 2.95
CCHCR1-217ENST00000503420 ANKLE2Q86XL3 938 aa33.46■■■□□ 2.95
CCHCR1-217ENST00000503420 CFAP65Q6ZU64 1925 aaKnown RBP33.45■■■□□ 2.95
CCHCR1-217ENST00000503420 RRBP1Q9P2E9 1410 aaKnown RBP33.45■■■□□ 2.94
CCHCR1-217ENST00000503420 UGGT1Q9NYU2 1555 aa33.44■■■□□ 2.94
CCHCR1-217ENST00000503420 LMTK2Q8IWU2 1503 aa33.43■■■□□ 2.94
CCHCR1-217ENST00000503420 VWDEQ8N2E2 1590 aa33.39■■■□□ 2.94
CCHCR1-217ENST00000503420 STAG3Q9UJ98 1225 aa33.39■■■□□ 2.94
CCHCR1-217ENST00000503420 EFCAB6Q5THR3 1501 aa33.3■■■□□ 2.92
CCHCR1-217ENST00000503420 NUP155O75694 1391 aa33.3■■■□□ 2.92
CCHCR1-217ENST00000503420 IDI1Q13907 227 aa33.28■■■□□ 2.92
CCHCR1-217ENST00000503420 SLC52A1Q9NWF4 448 aa33.28■■■□□ 2.92
CCHCR1-217ENST00000503420 ZNF335Q9H4Z2 1342 aaPredicted RBP33.27■■■□□ 2.92
CCHCR1-217ENST00000503420 RPRD2Q5VT52 1461 aaKnown RBP33.26■■■□□ 2.92
CCHCR1-217ENST00000503420 EID1Q9Y6B2 187 aa33.26■■■□□ 2.91
CCHCR1-217ENST00000503420 UNC13BO14795 1591 aa33.26■■■□□ 2.91
CCHCR1-217ENST00000503420 TXNDC2Q86VQ3 553 aa33.24■■■□□ 2.91
CCHCR1-217ENST00000503420 NOS1P29475 1434 aa33.24■■■□□ 2.91
CCHCR1-217ENST00000503420 NPHP4O75161 1426 aaPredicted RBP33.23■■■□□ 2.91
CCHCR1-217ENST00000503420 POLR1AO95602 1720 aaPredicted RBP33.22■■■□□ 2.91
CCHCR1-217ENST00000503420 TET3O43151 1660 aa33.21■■■□□ 2.91
CCHCR1-217ENST00000503420 UBR1Q8IWV7 1749 aa33.19■■■□□ 2.9
CCHCR1-217ENST00000503420 LTBP4Q8N2S1 1624 aa33.19■■■□□ 2.9
CCHCR1-217ENST00000503420 MED14O60244 1454 aa33.18■■■□□ 2.9
CCHCR1-217ENST00000503420 NEURL4Q96JN8 1562 aa33.18■■■□□ 2.9
CCHCR1-217ENST00000503420 PIK3C2BO00750 1634 aa33.16■■■□□ 2.9
CCHCR1-217ENST00000503420 SYNMO15061 1565 aa33.15■■■□□ 2.9
CCHCR1-217ENST00000503420 NAIPQ13075 1403 aa33.15■■■□□ 2.9
CCHCR1-217ENST00000503420 GCC2Q8IWJ2 1684 aa33.14■■■□□ 2.9
CCHCR1-217ENST00000503420 IQGAP3Q86VI3 1631 aa33.14■■■□□ 2.9
CCHCR1-217ENST00000503420 SCAF11Q99590 1463 aaKnown RBP33.14■■■□□ 2.9
CCHCR1-217ENST00000503420 TMEM2Q9UHN6 1383 aa33.14■■■□□ 2.9
CCHCR1-217ENST00000503420 LTKP29376 864 aa33.14■■■□□ 2.9
CCHCR1-217ENST00000503420 SLIT1O75093 1534 aa33.12■■■□□ 2.89
CCHCR1-217ENST00000503420 TRIM52Q96A61 297 aa33.11■■■□□ 2.89
CCHCR1-217ENST00000503420 ARHGAP23Q9P227 1491 aa33.11■■■□□ 2.89
CCHCR1-217ENST00000503420 CHGAP10645 457 aaKnown RBP33.1■■■□□ 2.89
CCHCR1-217ENST00000503420 HDGFP51858 240 aaKnown RBP33.09■■■□□ 2.89
CCHCR1-217ENST00000503420 HFM1A2PYH4 1435 aa33.09■■■□□ 2.89
CCHCR1-217ENST00000503420 IQSEC2Q5JU85 1478 aa33.08■■■□□ 2.89
CCHCR1-217ENST00000503420 IQGAP1P46940 1657 aa33.07■■■□□ 2.88
CCHCR1-217ENST00000503420 KDM5AP29375 1690 aaKnown RBP33.06■■■□□ 2.88
CCHCR1-217ENST00000503420 E9PCH4 1651 aa33.04■■■□□ 2.88
CCHCR1-217ENST00000503420 ADGRB3O60242 1522 aa33.04■■■□□ 2.88
CCHCR1-217ENST00000503420 BCANQ96GW7 911 aa33.04■■■□□ 2.88
CCHCR1-217ENST00000503420 CPS1P31327 1500 aa33.01■■■□□ 2.87
CCHCR1-217ENST00000503420 PPP1R15AO75807 674 aaPredicted RBP33■■■□□ 2.87
CCHCR1-217ENST00000503420 UBAP1LF5GYI3 381 aa32.98■■■□□ 2.87
CCHCR1-217ENST00000503420 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.96■■■□□ 2.87
CCHCR1-217ENST00000503420 SLC4A1APQ9BWU0 796 aaKnown RBP32.95■■■□□ 2.87
CCHCR1-217ENST00000503420 RIMS2Q9UQ26 1411 aa32.93■■■□□ 2.86
CCHCR1-217ENST00000503420 SLC26A8Q96RN1 970 aa32.91■■■□□ 2.86
CCHCR1-217ENST00000503420 TMEM131LA2VDJ0 1609 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms