RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 L3MBTL2Q969R5 705 aa31.43■■■□□ 2.62
PTPN13-205ENST00000502971 KDM5CP41229 1560 aa31.4■■■□□ 2.62
PTPN13-205ENST00000502971 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.36■■■□□ 2.61
PTPN13-205ENST00000502971 MLH3Q9UHC1 1453 aa31.35■■■□□ 2.61
PTPN13-205ENST00000502971 RICTORQ6R327 1708 aa31.34■■■□□ 2.61
PTPN13-205ENST00000502971 RAPGEF3O95398 923 aa31.34■■■□□ 2.61
PTPN13-205ENST00000502971 KIDINS220Q9ULH0 1771 aa31.34■■■□□ 2.61
PTPN13-205ENST00000502971 EIF2AK4Q9P2K8 1649 aaKnown RBP31.33■■■□□ 2.61
PTPN13-205ENST00000502971 MYT1LQ9UL68 1186 aa31.33■■■□□ 2.61
PTPN13-205ENST00000502971 DHX29Q7Z478 1369 aaKnown RBP31.33■■■□□ 2.61
PTPN13-205ENST00000502971 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
PTPN13-205ENST00000502971 HECW2Q9P2P5 1572 aa31.3■■■□□ 2.6
PTPN13-205ENST00000502971 ZMYM4Q5VZL5 1548 aa31.27■■■□□ 2.6
PTPN13-205ENST00000502971 FRMPD1Q5SYB0 1578 aa31.26■■■□□ 2.6
PTPN13-205ENST00000502971 COL17A1Q9UMD9 1497 aaPredicted RBP31.24■■■□□ 2.59
PTPN13-205ENST00000502971 ATP10AO60312 1499 aa31.23■■■□□ 2.59
PTPN13-205ENST00000502971 KANK1Q14678 1352 aa31.21■■■□□ 2.59
PTPN13-205ENST00000502971 CCDC144AA2RUR9 1427 aa31.21■■■□□ 2.59
PTPN13-205ENST00000502971 A2MP01023 1474 aa31.2■■■□□ 2.59
PTPN13-205ENST00000502971 PLA2R1Q13018 1463 aa31.2■■■□□ 2.58
PTPN13-205ENST00000502971 VWDEQ8N2E2 1590 aa31.2■■■□□ 2.58
PTPN13-205ENST00000502971 KIF3BO15066 747 aa31.18■■■□□ 2.58
PTPN13-205ENST00000502971 NBPF8Q3BBV2 869 aa31.18■■■□□ 2.58
PTPN13-205ENST00000502971 PRDM15P57071 1507 aaPredicted RBP31.18■■■□□ 2.58
PTPN13-205ENST00000502971 BCORL1Q5H9F3 1711 aa31.15■■■□□ 2.58
PTPN13-205ENST00000502971 TET3O43151 1660 aa31.14■■■□□ 2.58
PTPN13-205ENST00000502971 ABCA6Q8N139 1617 aa31.14■■■□□ 2.58
PTPN13-205ENST00000502971 MROH1Q8NDA8 1641 aa31.13■■■□□ 2.57
PTPN13-205ENST00000502971 UHRF1BP1Q6BDS2 1440 aa31.13■■■□□ 2.57
PTPN13-205ENST00000502971 MIER1Q8N108 512 aa31.12■■■□□ 2.57
PTPN13-205ENST00000502971 RNF17Q9BXT8 1623 aaKnown RBP31.12■■■□□ 2.57
PTPN13-205ENST00000502971 E9PCH4 1651 aa31.12■■■□□ 2.57
PTPN13-205ENST00000502971 EIF4G2P78344 907 aaKnown RBP eCLIP31.11■■■□□ 2.57
PTPN13-205ENST00000502971 DIP2CQ9Y2E4 1556 aa31.1■■■□□ 2.57
PTPN13-205ENST00000502971 HIRIP3Q9BW71 556 aaPredicted RBP31.1■■■□□ 2.57
PTPN13-205ENST00000502971 YEATS2Q9ULM3 1422 aa31.08■■■□□ 2.57
PTPN13-205ENST00000502971 HSPA5P11021 654 aaKnown RBP31.07■■■□□ 2.56
PTPN13-205ENST00000502971 PTPRTO14522 1441 aa31.05■■■□□ 2.56
PTPN13-205ENST00000502971 LMTK2Q8IWU2 1503 aa31.04■■■□□ 2.56
PTPN13-205ENST00000502971 TRPM2O94759 1503 aa31.03■■■□□ 2.56
PTPN13-205ENST00000502971 REREQ9P2R6 1566 aa31.02■■■□□ 2.56
PTPN13-205ENST00000502971 ARHGEF40Q8TER5 1519 aa31.01■■■□□ 2.55
PTPN13-205ENST00000502971 SPHKAPQ2M3C7 1700 aa31.01■■■□□ 2.55
PTPN13-205ENST00000502971 DCAF11Q8TEB1 546 aa31■■■□□ 2.55
PTPN13-205ENST00000502971 RALGAPBQ86X10 1494 aa30.99■■■□□ 2.55
PTPN13-205ENST00000502971 DDX10Q13206 875 aaKnown RBP30.98■■■□□ 2.55
PTPN13-205ENST00000502971 EFCAB6Q5THR3 1501 aa30.97■■■□□ 2.55
PTPN13-205ENST00000502971 SPATA31E1Q6ZUB1 1445 aa30.96■■■□□ 2.55
PTPN13-205ENST00000502971 ZNF326Q5BKZ1 582 aaKnown RBP30.96■■■□□ 2.55
PTPN13-205ENST00000502971 KDM2AQ9Y2K7 1162 aa30.94■■■□□ 2.54
PTPN13-205ENST00000502971 AGLP35573 1532 aa30.92■■■□□ 2.54
PTPN13-205ENST00000502971 CEP152O94986 1710 aa30.92■■■□□ 2.54
PTPN13-205ENST00000502971 RGL3Q3MIN7 710 aa30.91■■■□□ 2.54
PTPN13-205ENST00000502971 PRAG1Q86YV5 1406 aa30.9■■■□□ 2.54
PTPN13-205ENST00000502971 CLTCL1P53675 1640 aa30.89■■■□□ 2.54
PTPN13-205ENST00000502971 GGT6Q6P531 493 aa30.88■■■□□ 2.53
PTPN13-205ENST00000502971 NEURL4Q96JN8 1562 aa30.87■■■□□ 2.53
PTPN13-205ENST00000502971 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
PTPN13-205ENST00000502971 USP47Q96K76 1375 aa30.85■■■□□ 2.53
PTPN13-205ENST00000502971 ABCC3O15438 1527 aa30.85■■■□□ 2.53
PTPN13-205ENST00000502971 WASHC2AQ641Q2 1341 aa30.84■■■□□ 2.53
PTPN13-205ENST00000502971 STAC3Q96MF2 364 aa30.84■■■□□ 2.53
PTPN13-205ENST00000502971 TRPM1Q7Z4N2 1603 aa30.82■■■□□ 2.52
PTPN13-205ENST00000502971 WASHC2CQ9Y4E1 1318 aa30.82■■■□□ 2.52
PTPN13-205ENST00000502971 CARD11Q9BXL7 1154 aa30.81■■■□□ 2.52
PTPN13-205ENST00000502971 PPP6R1Q9UPN7 881 aa30.8■■■□□ 2.52
PTPN13-205ENST00000502971 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
PTPN13-205ENST00000502971 NPATQ14207 1427 aa30.78■■■□□ 2.52
PTPN13-205ENST00000502971 CAMSAP1Q5T5Y3 1602 aa30.78■■■□□ 2.52
PTPN13-205ENST00000502971 POLR1AO95602 1720 aaPredicted RBP30.77■■■□□ 2.52
PTPN13-205ENST00000502971 CCDC7Q96M83 1385 aa30.77■■■□□ 2.52
PTPN13-205ENST00000502971 GPRASP1Q5JY77 1395 aa30.75■■■□□ 2.51
PTPN13-205ENST00000502971 LAMC1P11047 1609 aa30.74■■■□□ 2.51
PTPN13-205ENST00000502971 CNTLNQ9NXG0 1405 aa30.74■■■□□ 2.51
PTPN13-205ENST00000502971 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
PTPN13-205ENST00000502971 ARHGAP31Q2M1Z3 1444 aa30.73■■■□□ 2.51
PTPN13-205ENST00000502971 KIF1BO60333 1816 aa30.72■■■□□ 2.51
PTPN13-205ENST00000502971 SIGLEC1Q9BZZ2 1709 aa30.72■■■□□ 2.51
PTPN13-205ENST00000502971 UGGT1Q9NYU2 1555 aa30.7■■■□□ 2.51
PTPN13-205ENST00000502971 ARID4BQ4LE39 1312 aaPredicted RBP30.69■■■□□ 2.5
PTPN13-205ENST00000502971 ANP32CO43423 234 aa30.69■■■□□ 2.5
PTPN13-205ENST00000502971 MADDQ8WXG6 1647 aa30.68■■■□□ 2.5
PTPN13-205ENST00000502971 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
PTPN13-205ENST00000502971 NOS1P29475 1434 aa30.67■■■□□ 2.5
PTPN13-205ENST00000502971 CENPBP07199 599 aaPredicted RBP30.64■■■□□ 2.5
PTPN13-205ENST00000502971 NBPF1Q3BBV0 1214 aa30.64■■■□□ 2.5
PTPN13-205ENST00000502971 ADGRB3O60242 1522 aa30.63■■■□□ 2.49
PTPN13-205ENST00000502971 MYOM2P54296 1465 aa30.62■■■□□ 2.49
PTPN13-205ENST00000502971 ST20-MTHFSA0A0A6YYL1 179 aa30.6■■■□□ 2.49
PTPN13-205ENST00000502971 MLECQ14165 292 aa30.59■■■□□ 2.49
PTPN13-205ENST00000502971 MROH2AA6NES4 1674 aa30.58■■■□□ 2.49
PTPN13-205ENST00000502971 CCER2I3L3R5 266 aa30.58■■■□□ 2.49
PTPN13-205ENST00000502971 IFT172Q9UG01 1749 aa30.58■■■□□ 2.49
PTPN13-205ENST00000502971 ESF1Q9H501 851 aaKnown RBP30.57■■■□□ 2.48
PTPN13-205ENST00000502971 PIK3C2BO00750 1634 aa30.57■■■□□ 2.48
PTPN13-205ENST00000502971 CFAP65Q6ZU64 1925 aaKnown RBP30.57■■■□□ 2.48
PTPN13-205ENST00000502971 YTHDC1Q96MU7 727 aaKnown RBP30.56■■■□□ 2.48
PTPN13-205ENST00000502971 KIAA1210Q9ULL0 1709 aa30.56■■■□□ 2.48
PTPN13-205ENST00000502971 SYNMO15061 1565 aa30.55■■■□□ 2.48
PTPN13-205ENST00000502971 RPGRIP1LQ68CZ1 1315 aa30.53■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms