RNA–Protein interactions for RNA: ENST00000502969.1

SRPK1-206, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-206ENST00000502969 GNPATO15228 680 aa10.15□□□□□ -0.78
SRPK1-206ENST00000502969 PTGDRQ13258 359 aa10.14□□□□□ -0.79
SRPK1-206ENST00000502969 SLC24A3Q9HC58 644 aa10.14□□□□□ -0.79
SRPK1-206ENST00000502969 AK7Q96M32 723 aa10.13□□□□□ -0.79
SRPK1-206ENST00000502969 GPR37O15354 613 aa10.12□□□□□ -0.79
SRPK1-206ENST00000502969 ST18O60284 1047 aa10.12□□□□□ -0.79
SRPK1-206ENST00000502969 PRIM1P49642 420 aaKnown RBP10.12□□□□□ -0.79
SRPK1-206ENST00000502969 MAP2K5Q13163 448 aa10.12□□□□□ -0.79
SRPK1-206ENST00000502969 MINK1Q8N4C8 1332 aaPredicted RBP10.11□□□□□ -0.79
SRPK1-206ENST00000502969 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
SRPK1-206ENST00000502969 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
SRPK1-206ENST00000502969 ERBB3P21860 1342 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 PTPREP23469 700 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 EMP3P54852 163 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 ADAM33Q9BZ11 813 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 BCL2L12Q9HB09 334 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 CDHR5Q9HBB8 845 aa10.1□□□□□ -0.79
SRPK1-206ENST00000502969 CDAN1Q8IWY9 1227 aa10.08□□□□□ -0.8
SRPK1-206ENST00000502969 IRF6O14896 467 aa10.06□□□□□ -0.8
SRPK1-206ENST00000502969 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
SRPK1-206ENST00000502969 PPP1R3GB7ZBB8 358 aa10.05□□□□□ -0.8
SRPK1-206ENST00000502969 VARS2Q5ST30 1063 aaKnown RBP10.05□□□□□ -0.8
SRPK1-206ENST00000502969 CCDC102AQ96A19 550 aa10.05□□□□□ -0.8
SRPK1-206ENST00000502969 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
SRPK1-206ENST00000502969 NPDC1Q9NQX5 325 aaPredicted RBP10.04□□□□□ -0.8
SRPK1-206ENST00000502969 KCNK17Q96T54 332 aa10.03□□□□□ -0.8
SRPK1-206ENST00000502969 PBX2P40425 430 aa10.02□□□□□ -0.81
SRPK1-206ENST00000502969 PRSS12P56730 875 aa10.02□□□□□ -0.81
SRPK1-206ENST00000502969 MARVELD3Q96A59 401 aa10.02□□□□□ -0.81
SRPK1-206ENST00000502969 PADI6Q6TGC4 694 aa10.01□□□□□ -0.81
SRPK1-206ENST00000502969 TRIM66O15016 1216 aa10□□□□□ -0.81
SRPK1-206ENST00000502969 OATP04181 439 aa10□□□□□ -0.81
SRPK1-206ENST00000502969 FECHP22830 423 aa10□□□□□ -0.81
SRPK1-206ENST00000502969 CDCA7LQ96GN5 454 aa10□□□□□ -0.81
SRPK1-206ENST00000502969 DAXXQ9UER7 740 aaPredicted RBP10□□□□□ -0.81
SRPK1-206ENST00000502969 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
SRPK1-206ENST00000502969 ARHGAP33O14559 1287 aa9.98□□□□□ -0.81
SRPK1-206ENST00000502969 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
SRPK1-206ENST00000502969 PACS2Q86VP3 889 aa9.98□□□□□ -0.81
SRPK1-206ENST00000502969 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
SRPK1-206ENST00000502969 COL9A1P20849 921 aa9.97□□□□□ -0.81
SRPK1-206ENST00000502969 PDE4DQ08499 809 aa9.97□□□□□ -0.81
SRPK1-206ENST00000502969 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
SRPK1-206ENST00000502969 RBM46Q8TBY0 533 aaKnown RBP9.97□□□□□ -0.81
SRPK1-206ENST00000502969 AMHR2Q16671 573 aa9.95□□□□□ -0.82
SRPK1-206ENST00000502969 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
SRPK1-206ENST00000502969 ONECUT3O60422 494 aaPredicted RBP9.94□□□□□ -0.82
SRPK1-206ENST00000502969 ZNF687Q8N1G0 1237 aa9.94□□□□□ -0.82
SRPK1-206ENST00000502969 HS3ST6Q96QI5 342 aa9.94□□□□□ -0.82
SRPK1-206ENST00000502969 TTC13Q8NBP0 860 aa9.93□□□□□ -0.82
SRPK1-206ENST00000502969 ADGRG1Q9Y653 693 aa9.93□□□□□ -0.82
SRPK1-206ENST00000502969 CLCN1P35523 988 aa9.92□□□□□ -0.82
SRPK1-206ENST00000502969 PSEN2P49810 448 aa9.92□□□□□ -0.82
SRPK1-206ENST00000502969 METTL3Q86U44 580 aaKnown RBP9.91□□□□□ -0.82
SRPK1-206ENST00000502969 PXYLP1Q8TE99 480 aa9.9□□□□□ -0.82
SRPK1-206ENST00000502969 ZBED2Q9BTP6 218 aa9.9□□□□□ -0.82
SRPK1-206ENST00000502969 SLC4A5Q9BY07 1137 aa9.9□□□□□ -0.82
SRPK1-206ENST00000502969 TSKSQ9UJT2 592 aa9.9□□□□□ -0.82
SRPK1-206ENST00000502969 PNMA3Q9UL41 463 aa9.9□□□□□ -0.82
SRPK1-206ENST00000502969 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.89□□□□□ -0.83
SRPK1-206ENST00000502969 TMEM132AQ24JP5 1023 aa9.89□□□□□ -0.83
SRPK1-206ENST00000502969 FAM161AQ3B820 660 aa9.89□□□□□ -0.83
SRPK1-206ENST00000502969 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
SRPK1-206ENST00000502969 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
SRPK1-206ENST00000502969 NUDT18Q6ZVK8 323 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 PARP9Q8IXQ6 854 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 TATDN2Q93075 761 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 NBPF3Q9H094 633 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 GPBP1L1Q9HC44 474 aaPredicted RBP9.88□□□□□ -0.83
SRPK1-206ENST00000502969 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 AXIN2Q9Y2T1 843 aa9.88□□□□□ -0.83
SRPK1-206ENST00000502969 SLC4A3P48751 1232 aa9.87□□□□□ -0.83
SRPK1-206ENST00000502969 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
SRPK1-206ENST00000502969 KIAA1468Q9P260 1216 aa9.87□□□□□ -0.83
SRPK1-206ENST00000502969 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
SRPK1-206ENST00000502969 DNAJB2P25686 324 aa9.86□□□□□ -0.83
SRPK1-206ENST00000502969 GIGYF2Q6Y7W6 1299 aaKnown RBP9.86□□□□□ -0.83
SRPK1-206ENST00000502969 STAC3Q96MF2 364 aa9.86□□□□□ -0.83
SRPK1-206ENST00000502969 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
SRPK1-206ENST00000502969 DMRTA1Q5VZB9 504 aa9.85□□□□□ -0.83
SRPK1-206ENST00000502969 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
SRPK1-206ENST00000502969 TK2O00142 265 aa9.84□□□□□ -0.83
SRPK1-206ENST00000502969 FAM198AQ9UFP1 575 aa9.84□□□□□ -0.83
SRPK1-206ENST00000502969 RCCD1A6NED2 376 aa9.83□□□□□ -0.84
SRPK1-206ENST00000502969 LSM11P83369 360 aaKnown RBP eCLIP9.83□□□□□ -0.84
SRPK1-206ENST00000502969 SULF1Q8IWU6 871 aa9.83□□□□□ -0.84
SRPK1-206ENST00000502969 EYA1Q99502 592 aa9.83□□□□□ -0.84
SRPK1-206ENST00000502969 VPS9D1Q9Y2B5 631 aa9.83□□□□□ -0.84
SRPK1-206ENST00000502969 POTEEQ6S8J3 1075 aa9.82□□□□□ -0.84
SRPK1-206ENST00000502969 PHOX2BQ99453 314 aa9.82□□□□□ -0.84
SRPK1-206ENST00000502969 RSPH4AQ5TD94 716 aa9.81□□□□□ -0.84
SRPK1-206ENST00000502969 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
SRPK1-206ENST00000502969 SMAPO00193 183 aa9.8□□□□□ -0.84
SRPK1-206ENST00000502969 MMRN1Q13201 1228 aa9.8□□□□□ -0.84
SRPK1-206ENST00000502969 FAM98CQ17RN3 349 aaKnown RBP9.8□□□□□ -0.84
SRPK1-206ENST00000502969 LAPTM4BQ86VI4 370 aa9.8□□□□□ -0.84
SRPK1-206ENST00000502969 MRPL50Q8N5N7 158 aaKnown RBP9.79□□□□□ -0.84
SRPK1-206ENST00000502969 IL27Q8NEV9 243 aa9.79□□□□□ -0.84
SRPK1-206ENST00000502969 NLRP7Q8WX94 980 aa9.79□□□□□ -0.84
SRPK1-206ENST00000502969 TMEM134Q9H6X4 195 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms