RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 TYW1BQ6NUM6 668 aa11.54□□□□□ -0.56
PROM1-203ENST00000502943 ANKK1Q8NFD2 765 aa11.54□□□□□ -0.56
PROM1-203ENST00000502943 PHF14O94880 888 aa11.52□□□□□ -0.57
PROM1-203ENST00000502943 FBXW7Q969H0 707 aa11.52□□□□□ -0.57
PROM1-203ENST00000502943 IRX2Q9BZI1 471 aaPredicted RBP11.52□□□□□ -0.57
PROM1-203ENST00000502943 KIAA1468Q9P260 1216 aa11.5□□□□□ -0.57
PROM1-203ENST00000502943 SOWAHBA6NEL2 793 aa11.47□□□□□ -0.57
PROM1-203ENST00000502943 ITGBL1O95965 494 aaPredicted RBP11.47□□□□□ -0.57
PROM1-203ENST00000502943 LAPTM4BQ86VI4 370 aa11.47□□□□□ -0.57
PROM1-203ENST00000502943 SEPT9Q9UHD8 586 aaPredicted RBP11.47□□□□□ -0.57
PROM1-203ENST00000502943 DPYSL4O14531 572 aa11.46□□□□□ -0.57
PROM1-203ENST00000502943 ZFRQ96KR1 1074 aaKnown RBP11.46□□□□□ -0.57
PROM1-203ENST00000502943 C6orf132Q5T0Z8 1188 aa11.45□□□□□ -0.58
PROM1-203ENST00000502943 CAMK2BQ13554 666 aa11.44□□□□□ -0.58
PROM1-203ENST00000502943 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
PROM1-203ENST00000502943 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
PROM1-203ENST00000502943 EPAS1Q99814 870 aa11.43□□□□□ -0.58
PROM1-203ENST00000502943 TRIM6-TRIM34B2RNG4 842 aa11.41□□□□□ -0.58
PROM1-203ENST00000502943 DDX12PQ92771 950 aa11.41□□□□□ -0.58
PROM1-203ENST00000502943 ONECUT3O60422 494 aaPredicted RBP11.4□□□□□ -0.58
PROM1-203ENST00000502943 NYAP1Q6ZVC0 841 aa11.38□□□□□ -0.59
PROM1-203ENST00000502943 FAM98CQ17RN3 349 aaKnown RBP11.37□□□□□ -0.59
PROM1-203ENST00000502943 KCNC4Q03721 635 aa11.35□□□□□ -0.59
PROM1-203ENST00000502943 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.35□□□□□ -0.59
PROM1-203ENST00000502943 HPS5Q9UPZ3 1129 aa11.35□□□□□ -0.59
PROM1-203ENST00000502943 LRCH3Q96II8 777 aa11.34□□□□□ -0.59
PROM1-203ENST00000502943 NBR1Q14596 966 aa11.33□□□□□ -0.6
PROM1-203ENST00000502943 TSR1Q2NL82 804 aaKnown RBP11.33□□□□□ -0.6
PROM1-203ENST00000502943 TSR3Q9UJK0 312 aaKnown RBP11.33□□□□□ -0.6
PROM1-203ENST00000502943 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
PROM1-203ENST00000502943 MAP3K7O43318 606 aa11.31□□□□□ -0.6
PROM1-203ENST00000502943 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
PROM1-203ENST00000502943 Q6ZNB5 142 aa11.3□□□□□ -0.6
PROM1-203ENST00000502943 PACS2Q86VP3 889 aa11.28□□□□□ -0.6
PROM1-203ENST00000502943 PDIA6Q15084 440 aa11.27□□□□□ -0.61
PROM1-203ENST00000502943 SMAPO00193 183 aa11.26□□□□□ -0.61
PROM1-203ENST00000502943 PRIM1P49642 420 aaKnown RBP11.24□□□□□ -0.61
PROM1-203ENST00000502943 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
PROM1-203ENST00000502943 PPP4CP60510 307 aa11.23□□□□□ -0.61
PROM1-203ENST00000502943 SAMD7Q7Z3H4 446 aa11.23□□□□□ -0.61
PROM1-203ENST00000502943 C3orf80F5H4A9 247 aa11.22□□□□□ -0.61
PROM1-203ENST00000502943 CDCA7LQ96GN5 454 aa11.22□□□□□ -0.61
PROM1-203ENST00000502943 BBXQ8WY36 941 aaPredicted RBP11.21□□□□□ -0.61
PROM1-203ENST00000502943 SPDYE16A6NNV3 312 aaPredicted RBP11.2□□□□□ -0.62
PROM1-203ENST00000502943 PRSS12P56730 875 aa11.2□□□□□ -0.62
PROM1-203ENST00000502943 TJAP1Q5JTD0 557 aa11.2□□□□□ -0.62
PROM1-203ENST00000502943 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
PROM1-203ENST00000502943 LCE2BO14633 110 aa11.17□□□□□ -0.62
PROM1-203ENST00000502943 TATDN2Q93075 761 aa11.16□□□□□ -0.62
PROM1-203ENST00000502943 MTRQ99707 1265 aa11.16□□□□□ -0.62
PROM1-203ENST00000502943 PNMA3Q9UL41 463 aa11.16□□□□□ -0.62
PROM1-203ENST00000502943 CDHR5Q9HBB8 845 aa11.15□□□□□ -0.62
PROM1-203ENST00000502943 NBPF26B4DH59 902 aa11.14□□□□□ -0.63
PROM1-203ENST00000502943 GFRA3O60609 400 aa11.14□□□□□ -0.63
PROM1-203ENST00000502943 E2F4Q16254 413 aa11.14□□□□□ -0.63
PROM1-203ENST00000502943 RNF40O75150 1001 aa11.13□□□□□ -0.63
PROM1-203ENST00000502943 LAPTM4AQ15012 233 aa11.13□□□□□ -0.63
PROM1-203ENST00000502943 CERKQ8TCT0 537 aa11.13□□□□□ -0.63
PROM1-203ENST00000502943 PRKD2Q9BZL6 878 aa11.13□□□□□ -0.63
PROM1-203ENST00000502943 ZNF516Q92618 1163 aa11.12□□□□□ -0.63
PROM1-203ENST00000502943 IL21Q9HBE4 155 aa11.12□□□□□ -0.63
PROM1-203ENST00000502943 PPP1R18Q6NYC8 613 aa11.11□□□□□ -0.63
PROM1-203ENST00000502943 NUDT18Q6ZVK8 323 aa11.11□□□□□ -0.63
PROM1-203ENST00000502943 SPRYD3Q8NCJ5 442 aa11.11□□□□□ -0.63
PROM1-203ENST00000502943 OSBPP22059 807 aa11.1□□□□□ -0.63
PROM1-203ENST00000502943 APLP1P51693 650 aa11.09□□□□□ -0.63
PROM1-203ENST00000502943 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
PROM1-203ENST00000502943 TRAF7Q6Q0C0 670 aa11.08□□□□□ -0.64
PROM1-203ENST00000502943 NKX2-3Q8TAU0 364 aa11.06□□□□□ -0.64
PROM1-203ENST00000502943 WDR70Q9NW82 654 aa11.05□□□□□ -0.64
PROM1-203ENST00000502943 NRG2O14511 850 aaPredicted RBP11.04□□□□□ -0.64
PROM1-203ENST00000502943 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
PROM1-203ENST00000502943 RBM27Q9P2N5 1060 aaKnown RBP11.04□□□□□ -0.64
PROM1-203ENST00000502943 HDGFP51858 240 aaKnown RBP11.03□□□□□ -0.64
PROM1-203ENST00000502943 PADI6Q6TGC4 694 aa11.03□□□□□ -0.64
PROM1-203ENST00000502943 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.03□□□□□ -0.64
PROM1-203ENST00000502943 V9GY48 417 aaPredicted RBP11.03□□□□□ -0.64
PROM1-203ENST00000502943 COPS2P61201 443 aa11.02□□□□□ -0.65
PROM1-203ENST00000502943 SWT1Q5T5J6 900 aaKnown RBP11.02□□□□□ -0.65
PROM1-203ENST00000502943 TTC13Q8NBP0 860 aa11.01□□□□□ -0.65
PROM1-203ENST00000502943 NPDC1Q9NQX5 325 aaPredicted RBP11.01□□□□□ -0.65
PROM1-203ENST00000502943 CFAP44Q96MT7 982 aa11□□□□□ -0.65
PROM1-203ENST00000502943 PAXIP1Q6ZW49 1069 aaPredicted RBP10.99□□□□□ -0.65
PROM1-203ENST00000502943 SLF2Q8IX21 1173 aa10.97□□□□□ -0.65
PROM1-203ENST00000502943 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
PROM1-203ENST00000502943 NECTIN2Q92692 538 aa10.94□□□□□ -0.66
PROM1-203ENST00000502943 EYA1Q99502 592 aa10.94□□□□□ -0.66
PROM1-203ENST00000502943 GGCXP38435 758 aa10.93□□□□□ -0.66
PROM1-203ENST00000502943 ZPR1O75312 459 aa10.92□□□□□ -0.66
PROM1-203ENST00000502943 PCDHB3Q9Y5E6 796 aa10.89□□□□□ -0.67
PROM1-203ENST00000502943 MLLT3P42568 568 aaPredicted RBP10.88□□□□□ -0.67
PROM1-203ENST00000502943 SLC4A3P48751 1232 aa10.88□□□□□ -0.67
PROM1-203ENST00000502943 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
PROM1-203ENST00000502943 TMUB1Q9BVT8 246 aa10.88□□□□□ -0.67
PROM1-203ENST00000502943 TLL1O43897 1013 aa10.87□□□□□ -0.67
PROM1-203ENST00000502943 ZNF787Q6DD87 383 aa10.87□□□□□ -0.67
PROM1-203ENST00000502943 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
PROM1-203ENST00000502943 EMID1Q96A84 441 aaPredicted RBP10.86□□□□□ -0.67
PROM1-203ENST00000502943 TRIM67Q6ZTA4 783 aa10.85□□□□□ -0.67
PROM1-203ENST00000502943 PRR14Q9BWN1 585 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms