RNA–Protein interactions for RNA: ENST00000502775.1

LINC00955-201, long intergenic non-protein coding RNA 955, humanhuman

TSL 1 (best)

Gene LINC00955, Length 856 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00955-201ENST00000502775 PZPP20742 1482 aa20.44■□□□□ 0.86
LINC00955-201ENST00000502775 DNMT1P26358 1616 aaKnown RBP20.44■□□□□ 0.86
LINC00955-201ENST00000502775 DISP3Q9P2K9 1392 aa20.44■□□□□ 0.86
LINC00955-201ENST00000502775 TNRQ92752 1358 aa20.43■□□□□ 0.86
LINC00955-201ENST00000502775 VPS8Q8N3P4 1428 aa20.43■□□□□ 0.86
LINC00955-201ENST00000502775 POLR1AO95602 1720 aaPredicted RBP20.42■□□□□ 0.86
LINC00955-201ENST00000502775 TSPY4P0CV99 314 aa20.42■□□□□ 0.86
LINC00955-201ENST00000502775 TSPY10P0CW01 314 aa20.42■□□□□ 0.86
LINC00955-201ENST00000502775 ZNF335Q9H4Z2 1342 aaPredicted RBP20.42■□□□□ 0.86
LINC00955-201ENST00000502775 LRRC9Q6ZRR7 1453 aa20.4■□□□□ 0.86
LINC00955-201ENST00000502775 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
LINC00955-201ENST00000502775 SPATA31D1Q6ZQQ2 1576 aa20.39■□□□□ 0.85
LINC00955-201ENST00000502775 MAST1Q9Y2H9 1570 aa20.38■□□□□ 0.85
LINC00955-201ENST00000502775 ZC3H13Q5T200 1668 aaKnown RBP20.37■□□□□ 0.85
LINC00955-201ENST00000502775 MAP3K1Q13233 1512 aa20.37■□□□□ 0.85
LINC00955-201ENST00000502775 NLRP1Q9C000 1473 aa20.37■□□□□ 0.85
LINC00955-201ENST00000502775 RNF17Q9BXT8 1623 aaKnown RBP20.36■□□□□ 0.85
LINC00955-201ENST00000502775 EIF2AK4Q9P2K8 1649 aaKnown RBP20.35■□□□□ 0.85
LINC00955-201ENST00000502775 UBAP1LF5GYI3 381 aa20.34■□□□□ 0.85
LINC00955-201ENST00000502775 FBXO31Q5XUX0 539 aaPredicted RBP20.34■□□□□ 0.85
LINC00955-201ENST00000502775 MIA2Q96PC5 1412 aa20.33■□□□□ 0.84
LINC00955-201ENST00000502775 NEURL4Q96JN8 1562 aa20.33■□□□□ 0.84
LINC00955-201ENST00000502775 CPS1P31327 1500 aa20.32■□□□□ 0.84
LINC00955-201ENST00000502775 UGGT1Q9NYU2 1555 aa20.32■□□□□ 0.84
LINC00955-201ENST00000502775 THEMISQ8N1K5 641 aaPredicted RBP20.31■□□□□ 0.84
LINC00955-201ENST00000502775 MYOM3Q5VTT5 1437 aa20.3■□□□□ 0.84
LINC00955-201ENST00000502775 ANKLE2Q86XL3 938 aa20.3■□□□□ 0.84
LINC00955-201ENST00000502775 ABCC3O15438 1527 aa20.29■□□□□ 0.84
LINC00955-201ENST00000502775 DEPDC5O75140 1603 aa20.29■□□□□ 0.84
LINC00955-201ENST00000502775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.28■□□□□ 0.84
LINC00955-201ENST00000502775 SHANK2Q9UPX8 1470 aa20.27■□□□□ 0.84
LINC00955-201ENST00000502775 DUOX2Q9NRD8 1548 aa20.26■□□□□ 0.83
LINC00955-201ENST00000502775 MED14O60244 1454 aa20.25■□□□□ 0.83
LINC00955-201ENST00000502775 ILDR2Q71H61 639 aa20.25■□□□□ 0.83
LINC00955-201ENST00000502775 NPHP4O75161 1426 aaPredicted RBP20.25■□□□□ 0.83
LINC00955-201ENST00000502775 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
LINC00955-201ENST00000502775 IQGAP1P46940 1657 aa20.23■□□□□ 0.83
LINC00955-201ENST00000502775 LOC105371045A0A1W2PR82 267 aa20.23■□□□□ 0.83
LINC00955-201ENST00000502775 SOCS7O14512 581 aa20.23■□□□□ 0.83
LINC00955-201ENST00000502775 CEP152O94986 1710 aa20.23■□□□□ 0.83
LINC00955-201ENST00000502775 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
LINC00955-201ENST00000502775 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
LINC00955-201ENST00000502775 TOM1O60784 492 aa20.22■□□□□ 0.83
LINC00955-201ENST00000502775 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
LINC00955-201ENST00000502775 VWDEQ8N2E2 1590 aa20.21■□□□□ 0.83
LINC00955-201ENST00000502775 APLP2Q06481 763 aa20.2■□□□□ 0.82
LINC00955-201ENST00000502775 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
LINC00955-201ENST00000502775 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
LINC00955-201ENST00000502775 PRDM15P57071 1507 aaPredicted RBP20.18■□□□□ 0.82
LINC00955-201ENST00000502775 PTPN23Q9H3S7 1636 aa20.18■□□□□ 0.82
LINC00955-201ENST00000502775 KIF15Q9NS87 1388 aa20.18■□□□□ 0.82
LINC00955-201ENST00000502775 CFAP65Q6ZU64 1925 aaKnown RBP20.17■□□□□ 0.82
LINC00955-201ENST00000502775 UBR1Q8IWV7 1749 aa20.16■□□□□ 0.82
LINC00955-201ENST00000502775 SYNMO15061 1565 aa20.16■□□□□ 0.82
LINC00955-201ENST00000502775 ARHGAP31Q2M1Z3 1444 aa20.15■□□□□ 0.82
LINC00955-201ENST00000502775 PIP4K2BP78356 416 aa20.14■□□□□ 0.81
LINC00955-201ENST00000502775 ABCC5O15440 1437 aa20.13■□□□□ 0.81
LINC00955-201ENST00000502775 SCAF11Q99590 1463 aaKnown RBP20.12■□□□□ 0.81
LINC00955-201ENST00000502775 DAPK1P53355 1430 aa20.12■□□□□ 0.81
LINC00955-201ENST00000502775 KANK1Q14678 1352 aa20.12■□□□□ 0.81
LINC00955-201ENST00000502775 FGD6Q6ZV73 1430 aa20.1■□□□□ 0.81
LINC00955-201ENST00000502775 HSPA1LP34931 641 aa20.1■□□□□ 0.81
LINC00955-201ENST00000502775 SLIT1O75093 1534 aa20.1■□□□□ 0.81
LINC00955-201ENST00000502775 RRP7BPQ9NSQ0 103 aa20.09■□□□□ 0.81
LINC00955-201ENST00000502775 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
LINC00955-201ENST00000502775 STRCP1A6NGW2 1772 aa20.08■□□□□ 0.81
LINC00955-201ENST00000502775 MED1Q15648 1581 aaPredicted RBP20.08■□□□□ 0.8
LINC00955-201ENST00000502775 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.8
LINC00955-201ENST00000502775 LRRC7Q96NW7 1537 aa20.07■□□□□ 0.8
LINC00955-201ENST00000502775 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
LINC00955-201ENST00000502775 KDM5AP29375 1690 aaKnown RBP20.06■□□□□ 0.8
LINC00955-201ENST00000502775 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
LINC00955-201ENST00000502775 LMTK2Q8IWU2 1503 aa20.05■□□□□ 0.8
LINC00955-201ENST00000502775 PIK3C2BO00750 1634 aa20.05■□□□□ 0.8
LINC00955-201ENST00000502775 TXNDC2Q86VQ3 553 aa20.04■□□□□ 0.8
LINC00955-201ENST00000502775 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
LINC00955-201ENST00000502775 STAG3Q9UJ98 1225 aa20.03■□□□□ 0.8
LINC00955-201ENST00000502775 EFCAB6Q5THR3 1501 aa20.01■□□□□ 0.79
LINC00955-201ENST00000502775 TMEM2Q9UHN6 1383 aa20■□□□□ 0.79
LINC00955-201ENST00000502775 LTKP29376 864 aa20■□□□□ 0.79
LINC00955-201ENST00000502775 ADGRL2O95490 1459 aa19.99■□□□□ 0.79
LINC00955-201ENST00000502775 CHIC2Q9UKJ5 165 aa19.98■□□□□ 0.79
LINC00955-201ENST00000502775 PHF23Q9BUL5 403 aaPredicted RBP19.95■□□□□ 0.78
LINC00955-201ENST00000502775 ADGRB3O60242 1522 aa19.95■□□□□ 0.78
LINC00955-201ENST00000502775 NOS1P29475 1434 aa19.94■□□□□ 0.78
LINC00955-201ENST00000502775 XIRP1Q702N8 1843 aaKnown RBP19.94■□□□□ 0.78
LINC00955-201ENST00000502775 RPRD2Q5VT52 1461 aaKnown RBP19.93■□□□□ 0.78
LINC00955-201ENST00000502775 IDI1Q13907 227 aa19.93■□□□□ 0.78
LINC00955-201ENST00000502775 FAM50AQ14320 339 aaKnown RBP19.91■□□□□ 0.78
LINC00955-201ENST00000502775 SLC52A1Q9NWF4 448 aa19.91■□□□□ 0.78
LINC00955-201ENST00000502775 ANKRD50Q9ULJ7 1429 aa19.91■□□□□ 0.78
LINC00955-201ENST00000502775 TET3O43151 1660 aa19.89■□□□□ 0.77
LINC00955-201ENST00000502775 KCNA6P17658 529 aa19.88■□□□□ 0.77
LINC00955-201ENST00000502775 NKTRP30414 1462 aaKnown RBP19.87■□□□□ 0.77
LINC00955-201ENST00000502775 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
LINC00955-201ENST00000502775 GCC2Q8IWJ2 1684 aa19.87■□□□□ 0.77
LINC00955-201ENST00000502775 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
LINC00955-201ENST00000502775 FAM135BQ49AJ0 1406 aa19.85■□□□□ 0.77
LINC00955-201ENST00000502775 TMEM94Q12767 1356 aa19.85■□□□□ 0.77
LINC00955-201ENST00000502775 UNC13BO14795 1591 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms