RNA–Protein interactions for RNA: ENST00000502479.1

LINC00939-201, long intergenic non-protein coding RNA 939, humanhuman

TSL 1 (best) BASIC

Gene LINC00939, Length 4,972 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00939-201ENST00000502479 PLCH2O75038 1416 aa8.7□□□□□ -1.02
LINC00939-201ENST00000502479 SCAPERQ9BY12 1400 aa8.7□□□□□ -1.02
LINC00939-201ENST00000502479 WASHC2CQ9Y4E1 1318 aa8.7□□□□□ -1.02
LINC00939-201ENST00000502479 CLASP1Q7Z460 1538 aa8.7□□□□□ -1.02
LINC00939-201ENST00000502479 INSRP06213 1382 aa8.7□□□□□ -1.02
LINC00939-201ENST00000502479 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.7□□□□□ -1.02
LINC00939-201ENST00000502479 NEURL4Q96JN8 1562 aa8.69□□□□□ -1.02
LINC00939-201ENST00000502479 DENND4BO75064 1496 aaPredicted RBP8.69□□□□□ -1.02
LINC00939-201ENST00000502479 PPP4R2Q9NY27 417 aa8.69□□□□□ -1.02
LINC00939-201ENST00000502479 MYT1LQ9UL68 1186 aa8.69□□□□□ -1.02
LINC00939-201ENST00000502479 BRD4O60885 1362 aaPredicted RBP8.68□□□□□ -1.02
LINC00939-201ENST00000502479 ZNF644Q9H582 1327 aaPredicted RBP8.68□□□□□ -1.02
LINC00939-201ENST00000502479 PRKRIP1Q9H875 184 aaPredicted RBP8.68□□□□□ -1.02
LINC00939-201ENST00000502479 ZMYM4Q5VZL5 1548 aa8.68□□□□□ -1.02
LINC00939-201ENST00000502479 ZNF326Q5BKZ1 582 aaKnown RBP8.68□□□□□ -1.02
LINC00939-201ENST00000502479 TTC37Q6PGP7 1564 aa8.68□□□□□ -1.02
LINC00939-201ENST00000502479 KIF7Q2M1P5 1343 aa8.68□□□□□ -1.02
LINC00939-201ENST00000502479 ABCC1P33527 1531 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 MYBBP1AQ9BQG0 1328 aaKnown RBP8.67□□□□□ -1.02
LINC00939-201ENST00000502479 TRPM1Q7Z4N2 1603 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 SPATA31E1Q6ZUB1 1445 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 TMF1P82094 1093 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 ATP10AO60312 1499 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 MAGI2Q86UL8 1455 aa8.67□□□□□ -1.02
LINC00939-201ENST00000502479 HNRNPMP52272 730 aaKnown RBP eCLIP8.66□□□□□ -1.02
LINC00939-201ENST00000502479 SMG6Q86US8 1419 aaKnown RBP8.66□□□□□ -1.02
LINC00939-201ENST00000502479 TMC1Q8TDI8 760 aa8.66□□□□□ -1.02
LINC00939-201ENST00000502479 NPM1P06748 294 aaKnown RBP eCLIP8.65□□□□□ -1.02
LINC00939-201ENST00000502479 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
LINC00939-201ENST00000502479 HIRIP3Q9BW71 556 aaPredicted RBP8.65□□□□□ -1.02
LINC00939-201ENST00000502479 POLR3GLQ9BT43 218 aa8.65□□□□□ -1.02
LINC00939-201ENST00000502479 PRDM15P57071 1507 aaPredicted RBP8.64□□□□□ -1.03
LINC00939-201ENST00000502479 TET3O43151 1660 aa8.64□□□□□ -1.03
LINC00939-201ENST00000502479 CEP152O94986 1710 aa8.64□□□□□ -1.03
LINC00939-201ENST00000502479 FOXD1Q16676 465 aa8.64□□□□□ -1.03
LINC00939-201ENST00000502479 DCAF11Q8TEB1 546 aa8.64□□□□□ -1.03
LINC00939-201ENST00000502479 TRPM2O94759 1503 aa8.64□□□□□ -1.03
LINC00939-201ENST00000502479 FAM9BQ8IZU0 186 aa8.63□□□□□ -1.03
LINC00939-201ENST00000502479 PRAG1Q86YV5 1406 aa8.63□□□□□ -1.03
LINC00939-201ENST00000502479 DAXXQ9UER7 740 aaPredicted RBP8.63□□□□□ -1.03
LINC00939-201ENST00000502479 E9PCH4 1651 aa8.63□□□□□ -1.03
LINC00939-201ENST00000502479 KIAA1210Q9ULL0 1709 aa8.63□□□□□ -1.03
LINC00939-201ENST00000502479 SPAG9O60271 1321 aaKnown RBP8.63□□□□□ -1.03
LINC00939-201ENST00000502479 ABCA9Q8IUA7 1624 aa8.62□□□□□ -1.03
LINC00939-201ENST00000502479 RNF17Q9BXT8 1623 aaKnown RBP8.62□□□□□ -1.03
LINC00939-201ENST00000502479 NUDCQ9Y266 331 aa8.62□□□□□ -1.03
LINC00939-201ENST00000502479 GPRASP1Q5JY77 1395 aa8.61□□□□□ -1.03
LINC00939-201ENST00000502479 NBPF8Q3BBV2 869 aa8.61□□□□□ -1.03
LINC00939-201ENST00000502479 SPHKAPQ2M3C7 1700 aa8.61□□□□□ -1.03
LINC00939-201ENST00000502479 DEPDC5O75140 1603 aa8.61□□□□□ -1.03
LINC00939-201ENST00000502479 ATP7AQ04656 1500 aa8.6□□□□□ -1.03
LINC00939-201ENST00000502479 ZFYVE16Q7Z3T8 1539 aa8.6□□□□□ -1.03
LINC00939-201ENST00000502479 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.6□□□□□ -1.03
LINC00939-201ENST00000502479 SYNMO15061 1565 aa8.6□□□□□ -1.03
LINC00939-201ENST00000502479 COL17A1Q9UMD9 1497 aaPredicted RBP8.59□□□□□ -1.03
LINC00939-201ENST00000502479 BCANQ96GW7 911 aa8.59□□□□□ -1.03
LINC00939-201ENST00000502479 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.59□□□□□ -1.03
LINC00939-201ENST00000502479 KDM2AQ9Y2K7 1162 aa8.59□□□□□ -1.03
LINC00939-201ENST00000502479 NGEFQ8N5V2 710 aa8.59□□□□□ -1.03
LINC00939-201ENST00000502479 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
LINC00939-201ENST00000502479 NLRP13Q86W25 1043 aa8.59□□□□□ -1.04
LINC00939-201ENST00000502479 KDM5AP29375 1690 aaKnown RBP8.57□□□□□ -1.04
LINC00939-201ENST00000502479 MYOM2P54296 1465 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
LINC00939-201ENST00000502479 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 TSHZ2Q9NRE2 1034 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 FANCAO15360 1455 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 ADGRL1O94910 1474 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
LINC00939-201ENST00000502479 KNSTRNQ9Y448 316 aa8.56□□□□□ -1.04
LINC00939-201ENST00000502479 DHX29Q7Z478 1369 aaKnown RBP8.56□□□□□ -1.04
LINC00939-201ENST00000502479 WDR43Q15061 677 aaKnown RBP eCLIP8.56□□□□□ -1.04
LINC00939-201ENST00000502479 LMTK2Q8IWU2 1503 aa8.56□□□□□ -1.04
LINC00939-201ENST00000502479 KIF1BO60333 1816 aa8.56□□□□□ -1.04
LINC00939-201ENST00000502479 MADDQ8WXG6 1647 aa8.56□□□□□ -1.04
LINC00939-201ENST00000502479 A2MP01023 1474 aa8.56□□□□□ -1.04
LINC00939-201ENST00000502479 BCORL1Q5H9F3 1711 aa8.55□□□□□ -1.04
LINC00939-201ENST00000502479 RPGRIP1LQ68CZ1 1315 aa8.55□□□□□ -1.04
LINC00939-201ENST00000502479 ZC3H13Q5T200 1668 aaKnown RBP8.55□□□□□ -1.04
LINC00939-201ENST00000502479 IQGAP1P46940 1657 aa8.54□□□□□ -1.04
LINC00939-201ENST00000502479 PTPRTO14522 1441 aa8.54□□□□□ -1.04
LINC00939-201ENST00000502479 FANCIQ9NVI1 1328 aa8.54□□□□□ -1.04
LINC00939-201ENST00000502479 ANP32EQ9BTT0 268 aa8.54□□□□□ -1.04
LINC00939-201ENST00000502479 ST20-MTHFSA0A0A6YYL1 179 aa8.53□□□□□ -1.04
LINC00939-201ENST00000502479 ANP32AP39687 249 aaKnown RBP8.53□□□□□ -1.04
LINC00939-201ENST00000502479 PARD3Q8TEW0 1356 aa8.53□□□□□ -1.04
LINC00939-201ENST00000502479 VWDEQ8N2E2 1590 aa8.52□□□□□ -1.04
LINC00939-201ENST00000502479 SETBP1Q9Y6X0 1596 aa8.52□□□□□ -1.04
LINC00939-201ENST00000502479 CCDC136Q96JN2 1154 aa8.52□□□□□ -1.05
LINC00939-201ENST00000502479 HECW2Q9P2P5 1572 aa8.52□□□□□ -1.05
LINC00939-201ENST00000502479 NPC1L1Q9UHC9 1359 aa8.51□□□□□ -1.05
LINC00939-201ENST00000502479 NEO1Q92859 1461 aa8.51□□□□□ -1.05
LINC00939-201ENST00000502479 LRPPRCP42704 1394 aaKnown RBP8.51□□□□□ -1.05
LINC00939-201ENST00000502479 ASXL1Q8IXJ9 1541 aa8.51□□□□□ -1.05
LINC00939-201ENST00000502479 NINLQ9Y2I6 1382 aa8.51□□□□□ -1.05
LINC00939-201ENST00000502479 MAP3K4Q9Y6R4 1608 aa8.5□□□□□ -1.05
LINC00939-201ENST00000502479 BLMP54132 1417 aaPredicted RBP8.5□□□□□ -1.05
LINC00939-201ENST00000502479 CLTCL1P53675 1640 aa8.5□□□□□ -1.05
LINC00939-201ENST00000502479 EFCAB6Q5THR3 1501 aa8.5□□□□□ -1.05
LINC00939-201ENST00000502479 MYO3AQ8NEV4 1616 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms