RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 IQGAP3Q86VI3 1631 aa12.11□□□□□ -0.47
SPIRE1-211ENST00000498803 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPIRE1-211ENST00000498803 KIDINS220Q9ULH0 1771 aa12.1□□□□□ -0.47
SPIRE1-211ENST00000498803 KIF3BO15066 747 aa12.1□□□□□ -0.47
SPIRE1-211ENST00000498803 RAPGEF3O95398 923 aa12.1□□□□□ -0.47
SPIRE1-211ENST00000498803 FOXD1Q16676 465 aa12.1□□□□□ -0.47
SPIRE1-211ENST00000498803 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
SPIRE1-211ENST00000498803 ATP10AO60312 1499 aa12.08□□□□□ -0.48
SPIRE1-211ENST00000498803 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
SPIRE1-211ENST00000498803 RICTORQ6R327 1708 aa12.07□□□□□ -0.48
SPIRE1-211ENST00000498803 DNAJC5Q9H3Z4 198 aa12.07□□□□□ -0.48
SPIRE1-211ENST00000498803 PRDM15P57071 1507 aaPredicted RBP12.06□□□□□ -0.48
SPIRE1-211ENST00000498803 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
SPIRE1-211ENST00000498803 L3MBTL2Q969R5 705 aa12.05□□□□□ -0.48
SPIRE1-211ENST00000498803 BCORL1Q5H9F3 1711 aa12.05□□□□□ -0.48
SPIRE1-211ENST00000498803 VWDEQ8N2E2 1590 aa12.05□□□□□ -0.48
SPIRE1-211ENST00000498803 PPRC1Q5VV67 1664 aaKnown RBP12.04□□□□□ -0.48
SPIRE1-211ENST00000498803 LMTK2Q8IWU2 1503 aa12.04□□□□□ -0.48
SPIRE1-211ENST00000498803 KIF13AQ9H1H9 1805 aa12.04□□□□□ -0.48
SPIRE1-211ENST00000498803 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
SPIRE1-211ENST00000498803 PPP6R1Q9UPN7 881 aa12.03□□□□□ -0.48
SPIRE1-211ENST00000498803 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
SPIRE1-211ENST00000498803 ABCA6Q8N139 1617 aa12.02□□□□□ -0.49
SPIRE1-211ENST00000498803 TET3O43151 1660 aa12.02□□□□□ -0.49
SPIRE1-211ENST00000498803 FRMPD1Q5SYB0 1578 aa12.01□□□□□ -0.49
SPIRE1-211ENST00000498803 REREQ9P2R6 1566 aa12.01□□□□□ -0.49
SPIRE1-211ENST00000498803 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
SPIRE1-211ENST00000498803 TSPOAP1O95153 1857 aa12.01□□□□□ -0.49
SPIRE1-211ENST00000498803 PTPRTO14522 1441 aa12.01□□□□□ -0.49
SPIRE1-211ENST00000498803 YEATS2Q9ULM3 1422 aa12□□□□□ -0.49
SPIRE1-211ENST00000498803 GGT6Q6P531 493 aa11.99□□□□□ -0.49
SPIRE1-211ENST00000498803 WASHC2CQ9Y4E1 1318 aa11.99□□□□□ -0.49
SPIRE1-211ENST00000498803 PLA2R1Q13018 1463 aa11.99□□□□□ -0.49
SPIRE1-211ENST00000498803 AGLP35573 1532 aa11.99□□□□□ -0.49
SPIRE1-211ENST00000498803 MROH1Q8NDA8 1641 aa11.99□□□□□ -0.49
SPIRE1-211ENST00000498803 TRPM2O94759 1503 aa11.97□□□□□ -0.49
SPIRE1-211ENST00000498803 EFCAB6Q5THR3 1501 aa11.97□□□□□ -0.49
SPIRE1-211ENST00000498803 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
SPIRE1-211ENST00000498803 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
SPIRE1-211ENST00000498803 DIEXFQ68CQ4 756 aaKnown RBP11.96□□□□□ -0.49
SPIRE1-211ENST00000498803 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
SPIRE1-211ENST00000498803 E9PCH4 1651 aa11.95□□□□□ -0.5
SPIRE1-211ENST00000498803 ABCC3O15438 1527 aa11.95□□□□□ -0.5
SPIRE1-211ENST00000498803 CNTLNQ9NXG0 1405 aa11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 ZC3H13Q5T200 1668 aaKnown RBP11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 EIF4G2P78344 907 aaKnown RBP eCLIP11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 COL17A1Q9UMD9 1497 aaPredicted RBP11.94□□□□□ -0.5
SPIRE1-211ENST00000498803 DCAF11Q8TEB1 546 aa11.93□□□□□ -0.5
SPIRE1-211ENST00000498803 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
SPIRE1-211ENST00000498803 NPATQ14207 1427 aa11.92□□□□□ -0.5
SPIRE1-211ENST00000498803 NBPF8Q3BBV2 869 aa11.91□□□□□ -0.5
SPIRE1-211ENST00000498803 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
SPIRE1-211ENST00000498803 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
SPIRE1-211ENST00000498803 ESF1Q9H501 851 aaKnown RBP11.9□□□□□ -0.5
SPIRE1-211ENST00000498803 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.5
SPIRE1-211ENST00000498803 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
SPIRE1-211ENST00000498803 KDM2AQ9Y2K7 1162 aa11.89□□□□□ -0.51
SPIRE1-211ENST00000498803 NOS1P29475 1434 aa11.88□□□□□ -0.51
SPIRE1-211ENST00000498803 ZNF326Q5BKZ1 582 aaKnown RBP11.88□□□□□ -0.51
SPIRE1-211ENST00000498803 CAMSAP1Q5T5Y3 1602 aa11.88□□□□□ -0.51
SPIRE1-211ENST00000498803 CEP152O94986 1710 aa11.88□□□□□ -0.51
SPIRE1-211ENST00000498803 RPGRIP1LQ68CZ1 1315 aa11.87□□□□□ -0.51
SPIRE1-211ENST00000498803 PRAG1Q86YV5 1406 aa11.87□□□□□ -0.51
SPIRE1-211ENST00000498803 CLTCL1P53675 1640 aa11.86□□□□□ -0.51
SPIRE1-211ENST00000498803 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
SPIRE1-211ENST00000498803 ARID4BQ4LE39 1312 aaPredicted RBP11.86□□□□□ -0.51
SPIRE1-211ENST00000498803 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
SPIRE1-211ENST00000498803 ROCK2O75116 1388 aaKnown RBP11.84□□□□□ -0.51
SPIRE1-211ENST00000498803 GPRASP1Q5JY77 1395 aa11.84□□□□□ -0.51
SPIRE1-211ENST00000498803 USP47Q96K76 1375 aa11.83□□□□□ -0.52
SPIRE1-211ENST00000498803 MYOM2P54296 1465 aa11.83□□□□□ -0.52
SPIRE1-211ENST00000498803 ADGRB3O60242 1522 aa11.82□□□□□ -0.52
SPIRE1-211ENST00000498803 KIF1BO60333 1816 aa11.82□□□□□ -0.52
SPIRE1-211ENST00000498803 SLC24A1O60721 1099 aa11.81□□□□□ -0.52
SPIRE1-211ENST00000498803 MLECQ14165 292 aa11.81□□□□□ -0.52
SPIRE1-211ENST00000498803 ERVK-7P63135 1459 aa11.81□□□□□ -0.52
SPIRE1-211ENST00000498803 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
SPIRE1-211ENST00000498803 PIK3C2BO00750 1634 aa11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 LAMC1P11047 1609 aa11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 VGFO15240 615 aaPredicted RBP11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 IDI1Q13907 227 aa11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
SPIRE1-211ENST00000498803 TRPM1Q7Z4N2 1603 aa11.78□□□□□ -0.52
SPIRE1-211ENST00000498803 HIRIP3Q9BW71 556 aaPredicted RBP11.78□□□□□ -0.52
SPIRE1-211ENST00000498803 SYNMO15061 1565 aa11.78□□□□□ -0.52
SPIRE1-211ENST00000498803 PREX1Q8TCU6 1659 aa11.78□□□□□ -0.52
SPIRE1-211ENST00000498803 ZFYVE9O95405 1425 aa11.77□□□□□ -0.52
SPIRE1-211ENST00000498803 NRXN1Q9ULB1 1477 aa11.77□□□□□ -0.52
SPIRE1-211ENST00000498803 SPATA31D1Q6ZQQ2 1576 aa11.77□□□□□ -0.53
SPIRE1-211ENST00000498803 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
SPIRE1-211ENST00000498803 STAG3Q9UJ98 1225 aa11.77□□□□□ -0.53
SPIRE1-211ENST00000498803 CLTCQ00610 1675 aaKnown RBP11.77□□□□□ -0.53
SPIRE1-211ENST00000498803 MADDQ8WXG6 1647 aa11.76□□□□□ -0.53
SPIRE1-211ENST00000498803 FBXO31Q5XUX0 539 aaPredicted RBP11.76□□□□□ -0.53
SPIRE1-211ENST00000498803 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
SPIRE1-211ENST00000498803 CCDC7Q96M83 1385 aa11.76□□□□□ -0.53
SPIRE1-211ENST00000498803 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms