RNA–Protein interactions for RNA: ENST00000498628.6

CDKN2A-209, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-209ENST00000498628 NCOA1Q15788 1441 aa26.39■■□□□ 1.82
CDKN2A-209ENST00000498628 CAMSAP1Q5T5Y3 1602 aa26.37■■□□□ 1.81
CDKN2A-209ENST00000498628 PKD2Q13563 968 aa26.37■■□□□ 1.81
CDKN2A-209ENST00000498628 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
CDKN2A-209ENST00000498628 PTPN23Q9H3S7 1636 aa26.36■■□□□ 1.81
CDKN2A-209ENST00000498628 TNRQ92752 1358 aa26.34■■□□□ 1.81
CDKN2A-209ENST00000498628 PZPP20742 1482 aa26.34■■□□□ 1.81
CDKN2A-209ENST00000498628 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.81
CDKN2A-209ENST00000498628 FGD6Q6ZV73 1430 aa26.33■■□□□ 1.81
CDKN2A-209ENST00000498628 DUOX2Q9NRD8 1548 aa26.33■■□□□ 1.81
CDKN2A-209ENST00000498628 ZNF142P52746 1687 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-209ENST00000498628 SHANK2Q9UPX8 1470 aa26.32■■□□□ 1.8
CDKN2A-209ENST00000498628 FBXO31Q5XUX0 539 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-209ENST00000498628 EIF2AK4Q9P2K8 1649 aaKnown RBP26.32■■□□□ 1.8
CDKN2A-209ENST00000498628 ABCC5O15440 1437 aa26.31■■□□□ 1.8
CDKN2A-209ENST00000498628 A2ML1A8K2U0 1454 aa26.31■■□□□ 1.8
CDKN2A-209ENST00000498628 PLA2R1Q13018 1463 aa26.31■■□□□ 1.8
CDKN2A-209ENST00000498628 NCKAP5LQ9HCH0 1330 aa26.31■■□□□ 1.8
CDKN2A-209ENST00000498628 RRP7BPQ9NSQ0 103 aa26.3■■□□□ 1.8
CDKN2A-209ENST00000498628 KIF15Q9NS87 1388 aa26.3■■□□□ 1.8
CDKN2A-209ENST00000498628 TCOF1Q13428 1488 aaKnown RBP26.29■■□□□ 1.8
CDKN2A-209ENST00000498628 DAPK1P53355 1430 aa26.28■■□□□ 1.8
CDKN2A-209ENST00000498628 RNF17Q9BXT8 1623 aaKnown RBP26.28■■□□□ 1.8
CDKN2A-209ENST00000498628 ANKRD30AQ9BXX3 1397 aa26.25■■□□□ 1.79
CDKN2A-209ENST00000498628 THEMISQ8N1K5 641 aaPredicted RBP26.25■■□□□ 1.79
CDKN2A-209ENST00000498628 ZC3H13Q5T200 1668 aaKnown RBP26.25■■□□□ 1.79
CDKN2A-209ENST00000498628 ERBINQ96RT1 1412 aa26.24■■□□□ 1.79
CDKN2A-209ENST00000498628 DNMT1P26358 1616 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-209ENST00000498628 ABCC3O15438 1527 aa26.23■■□□□ 1.79
CDKN2A-209ENST00000498628 NLRP1Q9C000 1473 aa26.23■■□□□ 1.79
CDKN2A-209ENST00000498628 CROCC2H7BZ55 1655 aa26.22■■□□□ 1.79
CDKN2A-209ENST00000498628 FAM50AQ14320 339 aaKnown RBP26.22■■□□□ 1.79
CDKN2A-209ENST00000498628 CHIC2Q9UKJ5 165 aa26.22■■□□□ 1.79
CDKN2A-209ENST00000498628 KANK1Q14678 1352 aa26.2■■□□□ 1.79
CDKN2A-209ENST00000498628 ANKLE2Q86XL3 938 aa26.19■■□□□ 1.78
CDKN2A-209ENST00000498628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.18■■□□□ 1.78
CDKN2A-209ENST00000498628 UGGT1Q9NYU2 1555 aa26.14■■□□□ 1.78
CDKN2A-209ENST00000498628 LTBP4Q8N2S1 1624 aa26.14■■□□□ 1.77
CDKN2A-209ENST00000498628 MROH1Q8NDA8 1641 aa26.14■■□□□ 1.77
CDKN2A-209ENST00000498628 SPATA31D1Q6ZQQ2 1576 aa26.13■■□□□ 1.77
CDKN2A-209ENST00000498628 IQSEC2Q5JU85 1478 aa26.13■■□□□ 1.77
CDKN2A-209ENST00000498628 ERVK-7P63135 1459 aa26.12■■□□□ 1.77
CDKN2A-209ENST00000498628 ZNF335Q9H4Z2 1342 aaPredicted RBP26.12■■□□□ 1.77
CDKN2A-209ENST00000498628 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.11■■□□□ 1.77
CDKN2A-209ENST00000498628 PRDM15P57071 1507 aaPredicted RBP26.11■■□□□ 1.77
CDKN2A-209ENST00000498628 ARHGAP31Q2M1Z3 1444 aa26.11■■□□□ 1.77
CDKN2A-209ENST00000498628 CEP152O94986 1710 aa26.09■■□□□ 1.77
CDKN2A-209ENST00000498628 ADGRL2O95490 1459 aa26.08■■□□□ 1.77
CDKN2A-209ENST00000498628 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-209ENST00000498628 DEPDC5O75140 1603 aa26.04■■□□□ 1.76
CDKN2A-209ENST00000498628 NPHP4O75161 1426 aaPredicted RBP26.01■■□□□ 1.75
CDKN2A-209ENST00000498628 STAG3Q9UJ98 1225 aa26.01■■□□□ 1.75
CDKN2A-209ENST00000498628 ANKRD50Q9ULJ7 1429 aa26.01■■□□□ 1.75
CDKN2A-209ENST00000498628 CFAP65Q6ZU64 1925 aaKnown RBP26■■□□□ 1.75
CDKN2A-209ENST00000498628 LMTK2Q8IWU2 1503 aa26■■□□□ 1.75
CDKN2A-209ENST00000498628 NEURL4Q96JN8 1562 aa25.99■■□□□ 1.75
CDKN2A-209ENST00000498628 MED14O60244 1454 aa25.99■■□□□ 1.75
CDKN2A-209ENST00000498628 UBAP1LF5GYI3 381 aa25.97■■□□□ 1.75
CDKN2A-209ENST00000498628 EID1Q9Y6B2 187 aa25.97■■□□□ 1.75
CDKN2A-209ENST00000498628 VWDEQ8N2E2 1590 aa25.95■■□□□ 1.75
CDKN2A-209ENST00000498628 CPS1P31327 1500 aa25.95■■□□□ 1.74
CDKN2A-209ENST00000498628 TXNDC2Q86VQ3 553 aa25.94■■□□□ 1.74
CDKN2A-209ENST00000498628 ROCK1Q13464 1354 aa25.94■■□□□ 1.74
CDKN2A-209ENST00000498628 PPARGC1BQ86YN6 1023 aaKnown RBP25.93■■□□□ 1.74
CDKN2A-209ENST00000498628 UBR1Q8IWV7 1749 aa25.92■■□□□ 1.74
CDKN2A-209ENST00000498628 ITGAEP38570 1179 aa25.91■■□□□ 1.74
CDKN2A-209ENST00000498628 SLC52A1Q9NWF4 448 aa25.91■■□□□ 1.74
CDKN2A-209ENST00000498628 IDI1Q13907 227 aa25.9■■□□□ 1.74
CDKN2A-209ENST00000498628 SCAF11Q99590 1463 aaKnown RBP25.9■■□□□ 1.74
CDKN2A-209ENST00000498628 IQGAP1P46940 1657 aa25.9■■□□□ 1.74
CDKN2A-209ENST00000498628 EFCAB6Q5THR3 1501 aa25.88■■□□□ 1.73
CDKN2A-209ENST00000498628 TOM1O60784 492 aa25.88■■□□□ 1.73
CDKN2A-209ENST00000498628 SLIT1O75093 1534 aa25.88■■□□□ 1.73
CDKN2A-209ENST00000498628 RPRD2Q5VT52 1461 aaKnown RBP25.87■■□□□ 1.73
CDKN2A-209ENST00000498628 ARHGAP23Q9P227 1491 aa25.86■■□□□ 1.73
CDKN2A-209ENST00000498628 LTKP29376 864 aa25.86■■□□□ 1.73
CDKN2A-209ENST00000498628 NOS1P29475 1434 aa25.86■■□□□ 1.73
CDKN2A-209ENST00000498628 TMEM2Q9UHN6 1383 aa25.85■■□□□ 1.73
CDKN2A-209ENST00000498628 PIK3C2BO00750 1634 aa25.85■■□□□ 1.73
CDKN2A-209ENST00000498628 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
CDKN2A-209ENST00000498628 HDGFP51858 240 aaKnown RBP25.81■■□□□ 1.72
CDKN2A-209ENST00000498628 TET3O43151 1660 aa25.79■■□□□ 1.72
CDKN2A-209ENST00000498628 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
CDKN2A-209ENST00000498628 UNC13BO14795 1591 aa25.78■■□□□ 1.72
CDKN2A-209ENST00000498628 SYNMO15061 1565 aa25.78■■□□□ 1.72
CDKN2A-209ENST00000498628 NUP155O75694 1391 aa25.77■■□□□ 1.72
CDKN2A-209ENST00000498628 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
CDKN2A-209ENST00000498628 PIP4K2BP78356 416 aa25.75■■□□□ 1.71
CDKN2A-209ENST00000498628 BCANQ96GW7 911 aa25.74■■□□□ 1.71
CDKN2A-209ENST00000498628 GCC2Q8IWJ2 1684 aa25.74■■□□□ 1.71
CDKN2A-209ENST00000498628 RRBP1Q9P2E9 1410 aaKnown RBP25.71■■□□□ 1.71
CDKN2A-209ENST00000498628 DISP3Q9P2K9 1392 aa25.71■■□□□ 1.71
CDKN2A-209ENST00000498628 CHGAP10645 457 aaKnown RBP25.71■■□□□ 1.71
CDKN2A-209ENST00000498628 LRRC7Q96NW7 1537 aa25.7■■□□□ 1.7
CDKN2A-209ENST00000498628 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
CDKN2A-209ENST00000498628 PPP1R15AO75807 674 aaPredicted RBP25.69■■□□□ 1.7
CDKN2A-209ENST00000498628 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.69■■□□□ 1.7
CDKN2A-209ENST00000498628 KCNA6P17658 529 aa25.66■■□□□ 1.7
CDKN2A-209ENST00000498628 SLC26A8Q96RN1 970 aa25.66■■□□□ 1.7
CDKN2A-209ENST00000498628 STRCP1A6NGW2 1772 aa25.64■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms