RNA–Protein interactions for RNA: ENST00000498595.5

HDLBP-247, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-247ENST00000498595 MYO3AQ8NEV4 1616 aa22.67■■□□□ 1.22
HDLBP-247ENST00000498595 KDM5DQ9BY66 1539 aa22.67■■□□□ 1.22
HDLBP-247ENST00000498595 CEP170BQ9Y4F5 1589 aaPredicted RBP22.64■■□□□ 1.22
HDLBP-247ENST00000498595 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
HDLBP-247ENST00000498595 PKD2Q13563 968 aa22.63■■□□□ 1.21
HDLBP-247ENST00000498595 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
HDLBP-247ENST00000498595 NCKAP5LQ9HCH0 1330 aa22.62■■□□□ 1.21
HDLBP-247ENST00000498595 TNRQ92752 1358 aa22.62■■□□□ 1.21
HDLBP-247ENST00000498595 PLA2R1Q13018 1463 aa22.61■■□□□ 1.21
HDLBP-247ENST00000498595 PZPP20742 1482 aa22.6■■□□□ 1.21
HDLBP-247ENST00000498595 A2ML1A8K2U0 1454 aa22.6■■□□□ 1.21
HDLBP-247ENST00000498595 FBXO31Q5XUX0 539 aaPredicted RBP22.58■■□□□ 1.21
HDLBP-247ENST00000498595 EIF2AK4Q9P2K8 1649 aaKnown RBP22.54■■□□□ 1.2
HDLBP-247ENST00000498595 DUOX2Q9NRD8 1548 aa22.54■■□□□ 1.2
HDLBP-247ENST00000498595 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
HDLBP-247ENST00000498595 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
HDLBP-247ENST00000498595 RNF17Q9BXT8 1623 aaKnown RBP22.53■■□□□ 1.2
HDLBP-247ENST00000498595 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
HDLBP-247ENST00000498595 KIF15Q9NS87 1388 aa22.52■■□□□ 1.2
HDLBP-247ENST00000498595 FGD6Q6ZV73 1430 aa22.52■■□□□ 1.2
HDLBP-247ENST00000498595 THEMISQ8N1K5 641 aaPredicted RBP22.52■■□□□ 1.2
HDLBP-247ENST00000498595 NLRP1Q9C000 1473 aa22.52■■□□□ 1.2
HDLBP-247ENST00000498595 DNMT1P26358 1616 aaKnown RBP22.51■■□□□ 1.19
HDLBP-247ENST00000498595 LTBP4Q8N2S1 1624 aa22.5■■□□□ 1.19
HDLBP-247ENST00000498595 ABCC5O15440 1437 aa22.5■■□□□ 1.19
HDLBP-247ENST00000498595 ZC3H13Q5T200 1668 aaKnown RBP22.5■■□□□ 1.19
HDLBP-247ENST00000498595 RRP7BPQ9NSQ0 103 aa22.5■■□□□ 1.19
HDLBP-247ENST00000498595 ABCC3O15438 1527 aa22.5■■□□□ 1.19
HDLBP-247ENST00000498595 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
HDLBP-247ENST00000498595 DAPK1P53355 1430 aa22.48■■□□□ 1.19
HDLBP-247ENST00000498595 ZNF335Q9H4Z2 1342 aaPredicted RBP22.48■■□□□ 1.19
HDLBP-247ENST00000498595 ERBINQ96RT1 1412 aa22.48■■□□□ 1.19
HDLBP-247ENST00000498595 ANKLE2Q86XL3 938 aa22.47■■□□□ 1.19
HDLBP-247ENST00000498595 CROCC2H7BZ55 1655 aa22.46■■□□□ 1.19
HDLBP-247ENST00000498595 ANKRD30AQ9BXX3 1397 aa22.45■■□□□ 1.18
HDLBP-247ENST00000498595 UGGT1Q9NYU2 1555 aa22.45■■□□□ 1.18
HDLBP-247ENST00000498595 KANK1Q14678 1352 aa22.44■■□□□ 1.18
HDLBP-247ENST00000498595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.44■■□□□ 1.18
HDLBP-247ENST00000498595 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.43■■□□□ 1.185e-10■■□□□ 13
HDLBP-247ENST00000498595 CHIC2Q9UKJ5 165 aa22.43■■□□□ 1.18
HDLBP-247ENST00000498595 FAM50AQ14320 339 aaKnown RBP22.42■■□□□ 1.18
HDLBP-247ENST00000498595 MROH1Q8NDA8 1641 aa22.42■■□□□ 1.18
HDLBP-247ENST00000498595 ERVK-7P63135 1459 aa22.41■■□□□ 1.18
HDLBP-247ENST00000498595 SPATA31D1Q6ZQQ2 1576 aa22.41■■□□□ 1.18
HDLBP-247ENST00000498595 POLR1AO95602 1720 aaPredicted RBP22.4■■□□□ 1.18
HDLBP-247ENST00000498595 PRDM15P57071 1507 aaPredicted RBP22.39■■□□□ 1.17
HDLBP-247ENST00000498595 CEP152O94986 1710 aa22.37■■□□□ 1.17
HDLBP-247ENST00000498595 UBAP1LF5GYI3 381 aa22.37■■□□□ 1.17
HDLBP-247ENST00000498595 ARHGAP31Q2M1Z3 1444 aa22.36■■□□□ 1.17
HDLBP-247ENST00000498595 NEURL4Q96JN8 1562 aa22.35■■□□□ 1.17
HDLBP-247ENST00000498595 NPHP4O75161 1426 aaPredicted RBP22.35■■□□□ 1.17
HDLBP-247ENST00000498595 CPS1P31327 1500 aa22.32■■□□□ 1.16
HDLBP-247ENST00000498595 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
HDLBP-247ENST00000498595 MED14O60244 1454 aa22.32■■□□□ 1.16
HDLBP-247ENST00000498595 STAG3Q9UJ98 1225 aa22.31■■□□□ 1.16
HDLBP-247ENST00000498595 ADGRL2O95490 1459 aa22.3■■□□□ 1.16
HDLBP-247ENST00000498595 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
HDLBP-247ENST00000498595 IQGAP1P46940 1657 aa22.26■■□□□ 1.15
HDLBP-247ENST00000498595 LMTK2Q8IWU2 1503 aa22.26■■□□□ 1.15
HDLBP-247ENST00000498595 ANKRD50Q9ULJ7 1429 aa22.25■■□□□ 1.15
HDLBP-247ENST00000498595 TOM1O60784 492 aa22.25■■□□□ 1.15
HDLBP-247ENST00000498595 TXNDC2Q86VQ3 553 aa22.25■■□□□ 1.15
HDLBP-247ENST00000498595 SCAF11Q99590 1463 aaKnown RBP22.24■■□□□ 1.15
HDLBP-247ENST00000498595 UBR1Q8IWV7 1749 aa22.24■■□□□ 1.15
HDLBP-247ENST00000498595 SCAF1Q9H7N4 1312 aaKnown RBP22.24■■□□□ 1.15
HDLBP-247ENST00000498595 DISP3Q9P2K9 1392 aa22.24■■□□□ 1.15
HDLBP-247ENST00000498595 VWDEQ8N2E2 1590 aa22.23■■□□□ 1.15
HDLBP-247ENST00000498595 CFAP65Q6ZU64 1925 aaKnown RBP22.23■■□□□ 1.15
HDLBP-247ENST00000498595 SLIT1O75093 1534 aa22.21■■□□□ 1.15
HDLBP-247ENST00000498595 EFCAB6Q5THR3 1501 aa22.2■■□□□ 1.14
HDLBP-247ENST00000498595 PIP4K2BP78356 416 aa22.19■■□□□ 1.14
HDLBP-247ENST00000498595 ARHGAP23Q9P227 1491 aa22.19■■□□□ 1.14
HDLBP-247ENST00000498595 TMEM2Q9UHN6 1383 aa22.18■■□□□ 1.14
HDLBP-247ENST00000498595 LTKP29376 864 aa22.18■■□□□ 1.14
HDLBP-247ENST00000498595 IDI1Q13907 227 aa22.18■■□□□ 1.14
HDLBP-247ENST00000498595 SLC52A1Q9NWF4 448 aa22.18■■□□□ 1.14
HDLBP-247ENST00000498595 PIK3C2BO00750 1634 aa22.17■■□□□ 1.14
HDLBP-247ENST00000498595 RPRD2Q5VT52 1461 aaKnown RBP22.15■■□□□ 1.14
HDLBP-247ENST00000498595 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
HDLBP-247ENST00000498595 NOS1P29475 1434 aa22.14■■□□□ 1.14
HDLBP-247ENST00000498595 ITGAEP38570 1179 aa22.14■■□□□ 1.13
HDLBP-247ENST00000498595 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
HDLBP-247ENST00000498595 KDM5AP29375 1690 aaKnown RBP22.13■■□□□ 1.13
HDLBP-247ENST00000498595 SYNMO15061 1565 aa22.12■■□□□ 1.13
HDLBP-247ENST00000498595 BCANQ96GW7 911 aa22.1■■□□□ 1.13
HDLBP-247ENST00000498595 ADGRB3O60242 1522 aa22.1■■□□□ 1.13
HDLBP-247ENST00000498595 LRRC7Q96NW7 1537 aa22.1■■□□□ 1.13
HDLBP-247ENST00000498595 HDGFP51858 240 aaKnown RBP22.09■■□□□ 1.13
HDLBP-247ENST00000498595 TET3O43151 1660 aa22.08■■□□□ 1.13
HDLBP-247ENST00000498595 HSPA1LP34931 641 aa22.07■■□□□ 1.12
HDLBP-247ENST00000498595 UNC13BO14795 1591 aa22.07■■□□□ 1.12
HDLBP-247ENST00000498595 PPP1R15AO75807 674 aaPredicted RBP22.05■■□□□ 1.12
HDLBP-247ENST00000498595 SLC26A8Q96RN1 970 aa22.04■■□□□ 1.12
HDLBP-247ENST00000498595 NUP155O75694 1391 aa22.03■■□□□ 1.12
HDLBP-247ENST00000498595 STRCP1A6NGW2 1772 aa22.03■■□□□ 1.12
HDLBP-247ENST00000498595 CHGAP10645 457 aaKnown RBP22.03■■□□□ 1.12
HDLBP-247ENST00000498595 GCC2Q8IWJ2 1684 aa22.03■■□□□ 1.12
HDLBP-247ENST00000498595 KCNA6P17658 529 aa22.01■■□□□ 1.11
HDLBP-247ENST00000498595 IQGAP3Q86VI3 1631 aa21.99■■□□□ 1.11
HDLBP-247ENST00000498595 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms