RNA–Protein interactions for RNA: ENST00000498594.5

CRAMP1-208, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 559 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-208ENST00000498594 STRCP1A6NGW2 1772 aa5.46□□□□□ -1.54
CRAMP1-208ENST00000498594 TROQ12816 1431 aaPredicted RBP5.46□□□□□ -1.54
CRAMP1-208ENST00000498594 SAMD9LQ8IVG5 1584 aa5.46□□□□□ -1.54
CRAMP1-208ENST00000498594 ZNF335Q9H4Z2 1342 aaPredicted RBP5.46□□□□□ -1.54
CRAMP1-208ENST00000498594 MLH3Q9UHC1 1453 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 AGLP35573 1532 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 ADGBQ8N7X0 1667 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 UBAP1LF5GYI3 381 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 ESF1Q9H501 851 aaKnown RBP5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 EEA1Q15075 1411 aa5.45□□□□□ -1.54
CRAMP1-208ENST00000498594 XIRP1Q702N8 1843 aaKnown RBP5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 MED1Q15648 1581 aaPredicted RBP5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 FMN1Q68DA7 1419 aa5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 ZNF777Q9ULD5 760 aaPredicted RBP5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 CEP170BQ9Y4F5 1589 aaPredicted RBP5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 DNMT1P26358 1616 aaKnown RBP5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 IQSEC2Q5JU85 1478 aa5.44□□□□□ -1.54
CRAMP1-208ENST00000498594 SYCP2Q9BX26 1530 aa5.43□□□□□ -1.54
CRAMP1-208ENST00000498594 CLIP1P30622 1438 aa5.43□□□□□ -1.54
CRAMP1-208ENST00000498594 HNRNPMP52272 730 aaKnown RBP eCLIP5.43□□□□□ -1.54
CRAMP1-208ENST00000498594 CDK11AQ9UQ88 783 aaPredicted RBP5.43□□□□□ -1.54
CRAMP1-208ENST00000498594 ZMYM3Q14202 1370 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 INO80Q9ULG1 1556 aaPredicted RBP5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 PIP4K2BP78356 416 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 TRIM26Q12899 539 aaPredicted RBP5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 FBXO3Q9UK99 471 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 ATP7AQ04656 1500 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 PLXNC1O60486 1568 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 NEURL4Q96JN8 1562 aa5.42□□□□□ -1.54
CRAMP1-208ENST00000498594 CNTLNQ9NXG0 1405 aa5.41□□□□□ -1.54
CRAMP1-208ENST00000498594 HSPA1LP34931 641 aa5.41□□□□□ -1.54
CRAMP1-208ENST00000498594 BCANQ96GW7 911 aa5.41□□□□□ -1.54
CRAMP1-208ENST00000498594 ALKQ9UM73 1620 aa5.41□□□□□ -1.54
CRAMP1-208ENST00000498594 NPATQ14207 1427 aa5.4□□□□□ -1.54
CRAMP1-208ENST00000498594 PTPRKQ15262 1439 aa5.4□□□□□ -1.54
CRAMP1-208ENST00000498594 TCOF1Q13428 1488 aaKnown RBP5.4□□□□□ -1.54
CRAMP1-208ENST00000498594 GPATCH8Q9UKJ3 1502 aaKnown RBP5.4□□□□□ -1.54
CRAMP1-208ENST00000498594 GGT6Q6P531 493 aa5.4□□□□□ -1.54
CRAMP1-208ENST00000498594 SPAG9O60271 1321 aaKnown RBP5.4□□□□□ -1.55
CRAMP1-208ENST00000498594 CEP152O94986 1710 aa5.4□□□□□ -1.55
CRAMP1-208ENST00000498594 A2MP01023 1474 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 FBXO31Q5XUX0 539 aaPredicted RBP5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 PODXL2Q9NZ53 605 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 IQGAP1P46940 1657 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 CASKIN1Q8WXD9 1431 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 PLA2R1Q13018 1463 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 CCDC18Q5T9S5 1454 aa5.39□□□□□ -1.55
CRAMP1-208ENST00000498594 VWDEQ8N2E2 1590 aa5.38□□□□□ -1.55
CRAMP1-208ENST00000498594 SETD1AO15047 1707 aaKnown RBP5.38□□□□□ -1.55
CRAMP1-208ENST00000498594 ZNF644Q9H582 1327 aaPredicted RBP5.38□□□□□ -1.55
CRAMP1-208ENST00000498594 SHANK2Q9UPX8 1470 aa5.38□□□□□ -1.55
CRAMP1-208ENST00000498594 TIAM1Q13009 1591 aa5.38□□□□□ -1.55
CRAMP1-208ENST00000498594 ZC3H13Q5T200 1668 aaKnown RBP5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 NEFLP07196 543 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 PKD2Q13563 968 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 PKNOX2Q96KN3 472 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 A2ML1A8K2U0 1454 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 UBR1Q8IWV7 1749 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 MYO5BQ9ULV0 1848 aa5.37□□□□□ -1.55
CRAMP1-208ENST00000498594 SAMD1Q6SPF0 538 aaPredicted RBP5.36□□□□□ -1.55
CRAMP1-208ENST00000498594 FYCO1Q9BQS8 1478 aa5.36□□□□□ -1.55
CRAMP1-208ENST00000498594 CPS1P31327 1500 aa5.36□□□□□ -1.55
CRAMP1-208ENST00000498594 DEPDC5O75140 1603 aa5.36□□□□□ -1.55
CRAMP1-208ENST00000498594 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.35□□□□□ -1.55
CRAMP1-208ENST00000498594 TOM1O60784 492 aa5.35□□□□□ -1.55
CRAMP1-208ENST00000498594 CFDP1Q9UEE9 299 aaPredicted RBP5.35□□□□□ -1.55
CRAMP1-208ENST00000498594 RNF17Q9BXT8 1623 aaKnown RBP5.34□□□□□ -1.55
CRAMP1-208ENST00000498594 CCNB3Q8WWL7 1395 aa5.34□□□□□ -1.55
CRAMP1-208ENST00000498594 TNRQ92752 1358 aa5.34□□□□□ -1.55
CRAMP1-208ENST00000498594 VSIG10Q8N0Z9 540 aa5.34□□□□□ -1.55
CRAMP1-208ENST00000498594 ANO8Q9HCE9 1232 aaPredicted RBP5.34□□□□□ -1.55
CRAMP1-208ENST00000498594 SRCAPQ6ZRS2 3230 aa5.34□□□□□ -1.56
CRAMP1-208ENST00000498594 UGGT1Q9NYU2 1555 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 LRRC7Q96NW7 1537 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 KDM5DQ9BY66 1539 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 PLEKHH2Q8IVE3 1493 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 MBD5Q9P267 1494 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 KIAA1107Q9UPP5 1409 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 KIF3BO15066 747 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 RGS17Q9UGC6 210 aaPredicted RBP5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 SYNMO15061 1565 aa5.33□□□□□ -1.56
CRAMP1-208ENST00000498594 PZPP20742 1482 aa5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 NPHP4O75161 1426 aaPredicted RBP5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 MTUS2Q5JR59 1369 aa5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 ROBO1Q9Y6N7 1651 aa5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 HAP1P54257 671 aaPredicted RBP5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 ANKLE2Q86XL3 938 aa5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 MED14O60244 1454 aa5.32□□□□□ -1.56
CRAMP1-208ENST00000498594 PHLPP1O60346 1717 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 DHX29Q7Z478 1369 aaKnown RBP5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 PIK3C2BO00750 1634 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 MROH1Q8NDA8 1641 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 WASHC2CQ9Y4E1 1318 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 GLIPR1L2Q4G1C9 344 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 THEMISQ8N1K5 641 aaPredicted RBP5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 CAMSAP2Q08AD1 1489 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 MIA2Q96PC5 1412 aa5.31□□□□□ -1.56
CRAMP1-208ENST00000498594 CHD2O14647 1828 aaKnown RBP5.3□□□□□ -1.56
CRAMP1-208ENST00000498594 ABCC3O15438 1527 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms