RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 A2ML1A8K2U0 1454 aa27.95■■■□□ 2.07
SMIM19-206ENST00000498447 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.07
SMIM19-206ENST00000498447 ZNF335Q9H4Z2 1342 aaPredicted RBP27.93■■■□□ 2.06
SMIM19-206ENST00000498447 DNMT1P26358 1616 aaKnown RBP27.93■■■□□ 2.06
SMIM19-206ENST00000498447 PZPP20742 1482 aa27.91■■■□□ 2.06
SMIM19-206ENST00000498447 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
SMIM19-206ENST00000498447 TSPY4P0CV99 314 aa27.9■■■□□ 2.06
SMIM19-206ENST00000498447 TSPY10P0CW01 314 aa27.9■■■□□ 2.06
SMIM19-206ENST00000498447 TNRQ92752 1358 aa27.89■■■□□ 2.06
SMIM19-206ENST00000498447 FBXO31Q5XUX0 539 aaPredicted RBP27.89■■■□□ 2.06
SMIM19-206ENST00000498447 WASHC2CQ9Y4E1 1318 aa27.88■■■□□ 2.05
SMIM19-206ENST00000498447 MAP3K1Q13233 1512 aa27.85■■■□□ 2.05
SMIM19-206ENST00000498447 MAST1Q9Y2H9 1570 aa27.85■■■□□ 2.05
SMIM19-206ENST00000498447 DISP3Q9P2K9 1392 aa27.84■■■□□ 2.05
SMIM19-206ENST00000498447 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
SMIM19-206ENST00000498447 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
SMIM19-206ENST00000498447 RNF17Q9BXT8 1623 aaKnown RBP27.81■■■□□ 2.04
SMIM19-206ENST00000498447 NEURL4Q96JN8 1562 aa27.8■■■□□ 2.04
SMIM19-206ENST00000498447 MYOM3Q5VTT5 1437 aa27.79■■■□□ 2.04
SMIM19-206ENST00000498447 MIA2Q96PC5 1412 aa27.79■■■□□ 2.04
SMIM19-206ENST00000498447 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
SMIM19-206ENST00000498447 EIF2AK4Q9P2K8 1649 aaKnown RBP27.77■■■□□ 2.04
SMIM19-206ENST00000498447 ZC3H13Q5T200 1668 aaKnown RBP27.76■■■□□ 2.03
SMIM19-206ENST00000498447 UBAP1LF5GYI3 381 aa27.76■■■□□ 2.03
SMIM19-206ENST00000498447 ABCC3O15438 1527 aa27.76■■■□□ 2.03
SMIM19-206ENST00000498447 SPATA31D1Q6ZQQ2 1576 aa27.75■■■□□ 2.03
SMIM19-206ENST00000498447 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.74■■■□□ 2.03
SMIM19-206ENST00000498447 UGGT1Q9NYU2 1555 aa27.73■■■□□ 2.03
SMIM19-206ENST00000498447 THEMISQ8N1K5 641 aaPredicted RBP27.72■■■□□ 2.03
SMIM19-206ENST00000498447 MROH1Q8NDA8 1641 aa27.71■■■□□ 2.03
SMIM19-206ENST00000498447 ANKLE2Q86XL3 938 aa27.71■■■□□ 2.03
SMIM19-206ENST00000498447 ILDR2Q71H61 639 aa27.7■■■□□ 2.02
SMIM19-206ENST00000498447 CPS1P31327 1500 aa27.68■■■□□ 2.02
SMIM19-206ENST00000498447 DUOX2Q9NRD8 1548 aa27.67■■■□□ 2.02
SMIM19-206ENST00000498447 DEPDC5O75140 1603 aa27.67■■■□□ 2.02
SMIM19-206ENST00000498447 ERVK-7P63135 1459 aa27.67■■■□□ 2.02
SMIM19-206ENST00000498447 SHANK2Q9UPX8 1470 aa27.67■■■□□ 2.02
SMIM19-206ENST00000498447 CEP152O94986 1710 aa27.66■■■□□ 2.02
SMIM19-206ENST00000498447 MED14O60244 1454 aa27.65■■■□□ 2.02
SMIM19-206ENST00000498447 NPHP4O75161 1426 aaPredicted RBP27.65■■■□□ 2.02
SMIM19-206ENST00000498447 VWDEQ8N2E2 1590 aa27.64■■■□□ 2.01
SMIM19-206ENST00000498447 CROCC2H7BZ55 1655 aa27.63■■■□□ 2.01
SMIM19-206ENST00000498447 PTPN23Q9H3S7 1636 aa27.62■■■□□ 2.01
SMIM19-206ENST00000498447 KIF15Q9NS87 1388 aa27.61■■■□□ 2.01
SMIM19-206ENST00000498447 ABCC5O15440 1437 aa27.6■■■□□ 2.01
SMIM19-206ENST00000498447 IQGAP1P46940 1657 aa27.6■■■□□ 2.01
SMIM19-206ENST00000498447 PRDM15P57071 1507 aaPredicted RBP27.59■■■□□ 2.01
SMIM19-206ENST00000498447 APLP2Q06481 763 aa27.58■■■□□ 2.01
SMIM19-206ENST00000498447 ERBINQ96RT1 1412 aa27.58■■■□□ 2
SMIM19-206ENST00000498447 CFAP65Q6ZU64 1925 aaKnown RBP27.57■■■□□ 2
SMIM19-206ENST00000498447 RRP7BPQ9NSQ0 103 aa27.55■■■□□ 2
SMIM19-206ENST00000498447 DAPK1P53355 1430 aa27.55■■■□□ 2
SMIM19-206ENST00000498447 UBR1Q8IWV7 1749 aa27.55■■■□□ 2
SMIM19-206ENST00000498447 SOCS7O14512 581 aa27.54■■■□□ 2
SMIM19-206ENST00000498447 TOM1O60784 492 aa27.54■■■□□ 2
SMIM19-206ENST00000498447 FGD6Q6ZV73 1430 aa27.54■■■□□ 2
SMIM19-206ENST00000498447 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
SMIM19-206ENST00000498447 ARHGAP31Q2M1Z3 1444 aa27.53■■■□□ 2
SMIM19-206ENST00000498447 PIP4K2BP78356 416 aa27.52■■■□□ 2
SMIM19-206ENST00000498447 STRCP1A6NGW2 1772 aa27.48■■□□□ 1.99
SMIM19-206ENST00000498447 HSPA1LP34931 641 aa27.48■■□□□ 1.99
SMIM19-206ENST00000498447 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
SMIM19-206ENST00000498447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.47■■□□□ 1.99
SMIM19-206ENST00000498447 ALKQ9UM73 1620 aa27.45■■□□□ 1.99
SMIM19-206ENST00000498447 ARHGAP23Q9P227 1491 aa27.45■■□□□ 1.99
SMIM19-206ENST00000498447 SLIT1O75093 1534 aa27.45■■□□□ 1.98
SMIM19-206ENST00000498447 SYNMO15061 1565 aa27.44■■□□□ 1.98
SMIM19-206ENST00000498447 LRRC7Q96NW7 1537 aa27.44■■□□□ 1.98
SMIM19-206ENST00000498447 KANK1Q14678 1352 aa27.44■■□□□ 1.98
SMIM19-206ENST00000498447 ANKRD30AQ9BXX3 1397 aa27.44■■□□□ 1.98
SMIM19-206ENST00000498447 CHIC2Q9UKJ5 165 aa27.42■■□□□ 1.98
SMIM19-206ENST00000498447 PIK3C2BO00750 1634 aa27.41■■□□□ 1.98
SMIM19-206ENST00000498447 LTKP29376 864 aa27.41■■□□□ 1.98
SMIM19-206ENST00000498447 LMTK2Q8IWU2 1503 aa27.41■■□□□ 1.98
SMIM19-206ENST00000498447 TXNDC2Q86VQ3 553 aa27.39■■□□□ 1.98
SMIM19-206ENST00000498447 MED1Q15648 1581 aaPredicted RBP27.37■■□□□ 1.97
SMIM19-206ENST00000498447 EID1Q9Y6B2 187 aa27.35■■□□□ 1.97
SMIM19-206ENST00000498447 ADGRL2O95490 1459 aa27.35■■□□□ 1.97
SMIM19-206ENST00000498447 TMEM2Q9UHN6 1383 aa27.35■■□□□ 1.97
SMIM19-206ENST00000498447 KDM5AP29375 1690 aaKnown RBP27.33■■□□□ 1.97
SMIM19-206ENST00000498447 EFCAB6Q5THR3 1501 aa27.32■■□□□ 1.96
SMIM19-206ENST00000498447 STAG3Q9UJ98 1225 aa27.32■■□□□ 1.96
SMIM19-206ENST00000498447 IDI1Q13907 227 aa27.3■■□□□ 1.96
SMIM19-206ENST00000498447 NOS1P29475 1434 aa27.29■■□□□ 1.96
SMIM19-206ENST00000498447 FAM50AQ14320 339 aaKnown RBP27.28■■□□□ 1.96
SMIM19-206ENST00000498447 XIRP1Q702N8 1843 aaKnown RBP27.26■■□□□ 1.95
SMIM19-206ENST00000498447 SENP3Q9H4L4 574 aaPredicted RBP27.25■■□□□ 1.95
SMIM19-206ENST00000498447 ADGRB3O60242 1522 aa27.25■■□□□ 1.95
SMIM19-206ENST00000498447 ANKRD50Q9ULJ7 1429 aa27.24■■□□□ 1.95
SMIM19-206ENST00000498447 TET3O43151 1660 aa27.21■■□□□ 1.95
SMIM19-206ENST00000498447 RPRD2Q5VT52 1461 aaKnown RBP27.2■■□□□ 1.95
SMIM19-206ENST00000498447 SLC52A1Q9NWF4 448 aa27.19■■□□□ 1.94
SMIM19-206ENST00000498447 SLC26A8Q96RN1 970 aa27.16■■□□□ 1.94
SMIM19-206ENST00000498447 TMEM94Q12767 1356 aa27.15■■□□□ 1.94
SMIM19-206ENST00000498447 KCNA6P17658 529 aa27.15■■□□□ 1.94
SMIM19-206ENST00000498447 PHF23Q9BUL5 403 aaPredicted RBP27.14■■□□□ 1.94
SMIM19-206ENST00000498447 UNC13BO14795 1591 aa27.13■■□□□ 1.93
SMIM19-206ENST00000498447 GCC2Q8IWJ2 1684 aa27.11■■□□□ 1.93
SMIM19-206ENST00000498447 NWD1Q149M9 1564 aa27.11■■□□□ 1.93
SMIM19-206ENST00000498447 MYO5BQ9ULV0 1848 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms