RNA–Protein interactions for RNA: ENST00000498226.5

SOX2-OT-217, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 560 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-217ENST00000498226 OSBPP22059 807 aa11.04□□□□□ -0.64
SOX2-OT-217ENST00000498226 MLLT3P42568 568 aaPredicted RBP11.04□□□□□ -0.64
SOX2-OT-217ENST00000498226 PPP1R3GB7ZBB8 358 aa11.03□□□□□ -0.64
SOX2-OT-217ENST00000498226 DMRTA1Q5VZB9 504 aa11.03□□□□□ -0.64
SOX2-OT-217ENST00000498226 RBM33Q96EV2 1170 aaKnown RBP11.03□□□□□ -0.64
SOX2-OT-217ENST00000498226 TK2O00142 265 aa11.02□□□□□ -0.65
SOX2-OT-217ENST00000498226 MAP3K7O43318 606 aa11.02□□□□□ -0.65
SOX2-OT-217ENST00000498226 C6orf132Q5T0Z8 1188 aa11.02□□□□□ -0.65
SOX2-OT-217ENST00000498226 ANKRD13DQ6ZTN6 518 aa11.02□□□□□ -0.65
SOX2-OT-217ENST00000498226 TESPA1A2RU30 521 aaPredicted RBP11.01□□□□□ -0.65
SOX2-OT-217ENST00000498226 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
SOX2-OT-217ENST00000498226 PRIM1P49642 420 aaKnown RBP11□□□□□ -0.65
SOX2-OT-217ENST00000498226 ADGRD1Q6QNK2 874 aa10.99□□□□□ -0.65
SOX2-OT-217ENST00000498226 SPNS2Q8IVW8 549 aa10.99□□□□□ -0.65
SOX2-OT-217ENST00000498226 TSR1Q2NL82 804 aaKnown RBP10.98□□□□□ -0.65
SOX2-OT-217ENST00000498226 ZBED2Q9BTP6 218 aa10.98□□□□□ -0.65
SOX2-OT-217ENST00000498226 COL9A1P20849 921 aa10.97□□□□□ -0.65
SOX2-OT-217ENST00000498226 SMYD5Q6GMV2 418 aa10.97□□□□□ -0.65
SOX2-OT-217ENST00000498226 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
SOX2-OT-217ENST00000498226 VPS9D1Q9Y2B5 631 aa10.95□□□□□ -0.66
SOX2-OT-217ENST00000498226 HRO43593 1189 aa10.93□□□□□ -0.66
SOX2-OT-217ENST00000498226 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
SOX2-OT-217ENST00000498226 ONECUT3O60422 494 aaPredicted RBP10.91□□□□□ -0.66
SOX2-OT-217ENST00000498226 PROX2Q3B8N5 592 aa10.9□□□□□ -0.66
SOX2-OT-217ENST00000498226 MMRN1Q13201 1228 aa10.89□□□□□ -0.67
SOX2-OT-217ENST00000498226 PLSCR2Q9NRY7 297 aa10.89□□□□□ -0.67
SOX2-OT-217ENST00000498226 RABGEF1Q9UJ41 708 aa10.89□□□□□ -0.67
SOX2-OT-217ENST00000498226 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
SOX2-OT-217ENST00000498226 BHMG1C9JSJ3 638 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-217ENST00000498226 TULP1O00294 542 aaPredicted RBP10.88□□□□□ -0.67
SOX2-OT-217ENST00000498226 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
SOX2-OT-217ENST00000498226 MYT1LQ9UL68 1186 aa10.88□□□□□ -0.67
SOX2-OT-217ENST00000498226 NBPF3Q9H094 633 aa10.87□□□□□ -0.67
SOX2-OT-217ENST00000498226 NPDC1Q9NQX5 325 aaPredicted RBP10.87□□□□□ -0.67
SOX2-OT-217ENST00000498226 PRSS12P56730 875 aa10.86□□□□□ -0.67
SOX2-OT-217ENST00000498226 CDCA7LQ96GN5 454 aa10.86□□□□□ -0.67
SOX2-OT-217ENST00000498226 STAC3Q96MF2 364 aa10.86□□□□□ -0.67
SOX2-OT-217ENST00000498226 NUTM2FA1L443 756 aa10.85□□□□□ -0.67
SOX2-OT-217ENST00000498226 PTGDRQ13258 359 aa10.85□□□□□ -0.67
SOX2-OT-217ENST00000498226 RBM26Q5T8P6 1007 aaKnown RBP10.85□□□□□ -0.67
SOX2-OT-217ENST00000498226 TSKSQ9UJT2 592 aa10.84□□□□□ -0.67
SOX2-OT-217ENST00000498226 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
SOX2-OT-217ENST00000498226 RNF166Q96A37 237 aaPredicted RBP10.83□□□□□ -0.68
SOX2-OT-217ENST00000498226 KIAA1468Q9P260 1216 aa10.83□□□□□ -0.68
SOX2-OT-217ENST00000498226 FCHSD2O94868 740 aa10.82□□□□□ -0.68
SOX2-OT-217ENST00000498226 PACS2Q86VP3 889 aa10.82□□□□□ -0.68
SOX2-OT-217ENST00000498226 TTC13Q8NBP0 860 aa10.81□□□□□ -0.68
SOX2-OT-217ENST00000498226 PADI6Q6TGC4 694 aa10.8□□□□□ -0.68
SOX2-OT-217ENST00000498226 LAPTM4BQ86VI4 370 aa10.8□□□□□ -0.68
SOX2-OT-217ENST00000498226 NBPF26B4DH59 902 aa10.79□□□□□ -0.68
SOX2-OT-217ENST00000498226 GPIHBP1Q8IV16 184 aa10.79□□□□□ -0.68
SOX2-OT-217ENST00000498226 FAM198AQ9UFP1 575 aa10.79□□□□□ -0.68
SOX2-OT-217ENST00000498226 HIC1Q14526 733 aa10.78□□□□□ -0.68
SOX2-OT-217ENST00000498226 GPR37O15354 613 aa10.77□□□□□ -0.69
SOX2-OT-217ENST00000498226 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
SOX2-OT-217ENST00000498226 FAM98CQ17RN3 349 aaKnown RBP10.76□□□□□ -0.69
SOX2-OT-217ENST00000498226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.76□□□□□ -0.69
SOX2-OT-217ENST00000498226 TATDN2Q93075 761 aa10.75□□□□□ -0.69
SOX2-OT-217ENST00000498226 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
SOX2-OT-217ENST00000498226 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
SOX2-OT-217ENST00000498226 GNPATO15228 680 aa10.73□□□□□ -0.69
SOX2-OT-217ENST00000498226 LMOD2Q6P5Q4 547 aa10.73□□□□□ -0.69
SOX2-OT-217ENST00000498226 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
SOX2-OT-217ENST00000498226 WNT2BQ93097 391 aa10.72□□□□□ -0.69
SOX2-OT-217ENST00000498226 KCTD12Q96CX2 325 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-217ENST00000498226 ZFRQ96KR1 1074 aaKnown RBP10.72□□□□□ -0.69
SOX2-OT-217ENST00000498226 C3orf80F5H4A9 247 aa10.71□□□□□ -0.69
SOX2-OT-217ENST00000498226 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
SOX2-OT-217ENST00000498226 BCANQ96GW7 911 aa10.71□□□□□ -0.69
SOX2-OT-217ENST00000498226 SMAPO00193 183 aa10.7□□□□□ -0.7
SOX2-OT-217ENST00000498226 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
SOX2-OT-217ENST00000498226 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
SOX2-OT-217ENST00000498226 EYA1Q99502 592 aa10.68□□□□□ -0.7
SOX2-OT-217ENST00000498226 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
SOX2-OT-217ENST00000498226 HCSTQ9UBK5 93 aa10.67□□□□□ -0.7
SOX2-OT-217ENST00000498226 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
SOX2-OT-217ENST00000498226 FECHP22830 423 aa10.66□□□□□ -0.7
SOX2-OT-217ENST00000498226 LRCH3Q96II8 777 aa10.65□□□□□ -0.7
SOX2-OT-217ENST00000498226 OATP04181 439 aa10.64□□□□□ -0.71
SOX2-OT-217ENST00000498226 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.64□□□□□ -0.71
SOX2-OT-217ENST00000498226 DNAJB2P25686 324 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 BCAMP50895 628 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 HDGFP51858 240 aaKnown RBP10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 MAP2K5Q13163 448 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 SAMD7Q7Z3H4 446 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 PXYLP1Q8TE99 480 aa10.62□□□□□ -0.71
SOX2-OT-217ENST00000498226 METTL3Q86U44 580 aaKnown RBP10.61□□□□□ -0.71
SOX2-OT-217ENST00000498226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
SOX2-OT-217ENST00000498226 PTPN5P54829 565 aa10.6□□□□□ -0.71
SOX2-OT-217ENST00000498226 ZC3H15Q8WU90 426 aaKnown RBP10.6□□□□□ -0.71
SOX2-OT-217ENST00000498226 RCCD1A6NED2 376 aa10.59□□□□□ -0.71
SOX2-OT-217ENST00000498226 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.71
SOX2-OT-217ENST00000498226 SWT1Q5T5J6 900 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-217ENST00000498226 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
SOX2-OT-217ENST00000498226 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
SOX2-OT-217ENST00000498226 TSR3Q9UJK0 312 aaKnown RBP10.58□□□□□ -0.72
SOX2-OT-217ENST00000498226 ZMYND10O75800 440 aa10.57□□□□□ -0.72
SOX2-OT-217ENST00000498226 HPS5Q9UPZ3 1129 aa10.57□□□□□ -0.72
SOX2-OT-217ENST00000498226 IRF6O14896 467 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms