RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 TEX14Q8IWB6 1497 aa25.57■■□□□ 1.68
CHRNA4-206ENST00000498043 EIF2AK4Q9P2K8 1649 aaKnown RBP25.57■■□□□ 1.68
CHRNA4-206ENST00000498043 PPRC1Q5VV67 1664 aaKnown RBP25.56■■□□□ 1.68
CHRNA4-206ENST00000498043 RICTORQ6R327 1708 aa25.56■■□□□ 1.68
CHRNA4-206ENST00000498043 MLH3Q9UHC1 1453 aa25.54■■□□□ 1.68
CHRNA4-206ENST00000498043 KIF13AQ9H1H9 1805 aa25.53■■□□□ 1.68
CHRNA4-206ENST00000498043 ABCA6Q8N139 1617 aa25.53■■□□□ 1.68
CHRNA4-206ENST00000498043 DIEXFQ68CQ4 756 aaKnown RBP25.52■■□□□ 1.68
CHRNA4-206ENST00000498043 DHX29Q7Z478 1369 aaKnown RBP25.52■■□□□ 1.68
CHRNA4-206ENST00000498043 RAPGEF3O95398 923 aa25.51■■□□□ 1.67
CHRNA4-206ENST00000498043 L3MBTL2Q969R5 705 aa25.51■■□□□ 1.67
CHRNA4-206ENST00000498043 A2MP01023 1474 aa25.49■■□□□ 1.67
CHRNA4-206ENST00000498043 FRMPD1Q5SYB0 1578 aa25.49■■□□□ 1.67
CHRNA4-206ENST00000498043 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
CHRNA4-206ENST00000498043 PRDM15P57071 1507 aaPredicted RBP25.48■■□□□ 1.67
CHRNA4-206ENST00000498043 KIF3BO15066 747 aa25.46■■□□□ 1.67
CHRNA4-206ENST00000498043 E9PCH4 1651 aa25.45■■□□□ 1.66
CHRNA4-206ENST00000498043 DIP2CQ9Y2E4 1556 aa25.44■■□□□ 1.66
CHRNA4-206ENST00000498043 VWDEQ8N2E2 1590 aa25.44■■□□□ 1.66
CHRNA4-206ENST00000498043 TET3O43151 1660 aa25.43■■□□□ 1.66
CHRNA4-206ENST00000498043 RNF17Q9BXT8 1623 aaKnown RBP25.43■■□□□ 1.66
CHRNA4-206ENST00000498043 PLA2R1Q13018 1463 aa25.42■■□□□ 1.66
CHRNA4-206ENST00000498043 KANK1Q14678 1352 aa25.41■■□□□ 1.66
CHRNA4-206ENST00000498043 CCDC144AA2RUR9 1427 aa25.41■■□□□ 1.66
CHRNA4-206ENST00000498043 ZMYM4Q5VZL5 1548 aa25.38■■□□□ 1.65
CHRNA4-206ENST00000498043 BCORL1Q5H9F3 1711 aa25.38■■□□□ 1.65
CHRNA4-206ENST00000498043 YEATS2Q9ULM3 1422 aa25.37■■□□□ 1.65
CHRNA4-206ENST00000498043 CEP152O94986 1710 aa25.37■■□□□ 1.65
CHRNA4-206ENST00000498043 SPHKAPQ2M3C7 1700 aa25.36■■□□□ 1.65
CHRNA4-206ENST00000498043 ATP10AO60312 1499 aa25.35■■□□□ 1.65
CHRNA4-206ENST00000498043 NBPF8Q3BBV2 869 aa25.33■■□□□ 1.65
CHRNA4-206ENST00000498043 HIRIP3Q9BW71 556 aaPredicted RBP25.33■■□□□ 1.65
CHRNA4-206ENST00000498043 EFCAB6Q5THR3 1501 aa25.32■■□□□ 1.64
CHRNA4-206ENST00000498043 TRPM2O94759 1503 aa25.31■■□□□ 1.64
CHRNA4-206ENST00000498043 LMTK2Q8IWU2 1503 aa25.28■■□□□ 1.64
CHRNA4-206ENST00000498043 ZNF326Q5BKZ1 582 aaKnown RBP25.27■■□□□ 1.64
CHRNA4-206ENST00000498043 GGT6Q6P531 493 aa25.27■■□□□ 1.64
CHRNA4-206ENST00000498043 CLTCL1P53675 1640 aa25.25■■□□□ 1.63
CHRNA4-206ENST00000498043 PTPRTO14522 1441 aa25.25■■□□□ 1.63
CHRNA4-206ENST00000498043 COL17A1Q9UMD9 1497 aaPredicted RBP25.23■■□□□ 1.63
CHRNA4-206ENST00000498043 ABCC3O15438 1527 aa25.23■■□□□ 1.63
CHRNA4-206ENST00000498043 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
CHRNA4-206ENST00000498043 DCAF11Q8TEB1 546 aa25.22■■□□□ 1.63
CHRNA4-206ENST00000498043 RGL3Q3MIN7 710 aa25.21■■□□□ 1.63
CHRNA4-206ENST00000498043 KDM2AQ9Y2K7 1162 aa25.21■■□□□ 1.63
CHRNA4-206ENST00000498043 CAMSAP1Q5T5Y3 1602 aa25.2■■□□□ 1.63
CHRNA4-206ENST00000498043 HSPA5P11021 654 aaKnown RBP25.19■■□□□ 1.62
CHRNA4-206ENST00000498043 UGGT1Q9NYU2 1555 aa25.18■■□□□ 1.62
CHRNA4-206ENST00000498043 ZC3H13Q5T200 1668 aaKnown RBP25.18■■□□□ 1.62
CHRNA4-206ENST00000498043 RALGAPBQ86X10 1494 aa25.18■■□□□ 1.62
CHRNA4-206ENST00000498043 EIF4G2P78344 907 aaKnown RBP eCLIP25.17■■□□□ 1.62
CHRNA4-206ENST00000498043 SPATA31E1Q6ZUB1 1445 aa25.17■■□□□ 1.62
CHRNA4-206ENST00000498043 ARHGEF40Q8TER5 1519 aa25.17■■□□□ 1.62
CHRNA4-206ENST00000498043 WASHC2CQ9Y4E1 1318 aa25.16■■□□□ 1.62
CHRNA4-206ENST00000498043 REREQ9P2R6 1566 aa25.16■■□□□ 1.62
CHRNA4-206ENST00000498043 NPATQ14207 1427 aa25.16■■□□□ 1.62
CHRNA4-206ENST00000498043 SIGLEC1Q9BZZ2 1709 aa25.14■■□□□ 1.61
CHRNA4-206ENST00000498043 PRAG1Q86YV5 1406 aa25.13■■□□□ 1.61
CHRNA4-206ENST00000498043 MIER1Q8N108 512 aa25.13■■□□□ 1.61
CHRNA4-206ENST00000498043 CFAP65Q6ZU64 1925 aaKnown RBP25.12■■□□□ 1.61
CHRNA4-206ENST00000498043 TRPM1Q7Z4N2 1603 aa25.12■■□□□ 1.61
CHRNA4-206ENST00000498043 KIF1BO60333 1816 aa25.1■■□□□ 1.61
CHRNA4-206ENST00000498043 AGLP35573 1532 aa25.09■■□□□ 1.61
CHRNA4-206ENST00000498043 DDX10Q13206 875 aaKnown RBP25.08■■□□□ 1.61
CHRNA4-206ENST00000498043 MROH2AA6NES4 1674 aa25.08■■□□□ 1.61
CHRNA4-206ENST00000498043 USP47Q96K76 1375 aa25.07■■□□□ 1.6
CHRNA4-206ENST00000498043 NEURL4Q96JN8 1562 aa25.05■■□□□ 1.6
CHRNA4-206ENST00000498043 CNTLNQ9NXG0 1405 aa25.05■■□□□ 1.6
CHRNA4-206ENST00000498043 MADDQ8WXG6 1647 aa25.04■■□□□ 1.6
CHRNA4-206ENST00000498043 ROCK2O75116 1388 aaKnown RBP25.04■■□□□ 1.6
CHRNA4-206ENST00000498043 TRHP20396 242 aaPredicted RBP25.03■■□□□ 1.6
CHRNA4-206ENST00000498043 CARD11Q9BXL7 1154 aa25.03■■□□□ 1.6
CHRNA4-206ENST00000498043 POLR1AO95602 1720 aaPredicted RBP25.02■■□□□ 1.6
CHRNA4-206ENST00000498043 SYNMO15061 1565 aa25.02■■□□□ 1.6
CHRNA4-206ENST00000498043 ARHGAP31Q2M1Z3 1444 aa25.01■■□□□ 1.6
CHRNA4-206ENST00000498043 ADGRB3O60242 1522 aa25.01■■□□□ 1.59
CHRNA4-206ENST00000498043 WASHC2AQ641Q2 1341 aa25■■□□□ 1.59
CHRNA4-206ENST00000498043 NOS1P29475 1434 aa25■■□□□ 1.59
CHRNA4-206ENST00000498043 CLTCQ00610 1675 aaKnown RBP24.99■■□□□ 1.59
CHRNA4-206ENST00000498043 IFT172Q9UG01 1749 aa24.99■■□□□ 1.59
CHRNA4-206ENST00000498043 PREX1Q8TCU6 1659 aa24.98■■□□□ 1.59
CHRNA4-206ENST00000498043 PIK3C2BO00750 1634 aa24.98■■□□□ 1.59
CHRNA4-206ENST00000498043 LAMC1P11047 1609 aa24.97■■□□□ 1.59
CHRNA4-206ENST00000498043 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
CHRNA4-206ENST00000498043 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
CHRNA4-206ENST00000498043 MLECQ14165 292 aa24.94■■□□□ 1.58
CHRNA4-206ENST00000498043 NBPF1Q3BBV0 1214 aa24.94■■□□□ 1.58
CHRNA4-206ENST00000498043 GPRASP1Q5JY77 1395 aa24.94■■□□□ 1.58
CHRNA4-206ENST00000498043 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
CHRNA4-206ENST00000498043 CHGAP10645 457 aaKnown RBP24.93■■□□□ 1.58
CHRNA4-206ENST00000498043 MYOM2P54296 1465 aa24.92■■□□□ 1.58
CHRNA4-206ENST00000498043 PPLO60437 1756 aa24.9■■□□□ 1.58
CHRNA4-206ENST00000498043 KIF7Q2M1P5 1343 aa24.89■■□□□ 1.57
CHRNA4-206ENST00000498043 STAC3Q96MF2 364 aa24.88■■□□□ 1.57
CHRNA4-206ENST00000498043 ERVK-7P63135 1459 aa24.87■■□□□ 1.57
CHRNA4-206ENST00000498043 PPP6R1Q9UPN7 881 aa24.87■■□□□ 1.57
CHRNA4-206ENST00000498043 ST20-MTHFSA0A0A6YYL1 179 aa24.86■■□□□ 1.57
CHRNA4-206ENST00000498043 KIAA1210Q9ULL0 1709 aa24.86■■□□□ 1.57
CHRNA4-206ENST00000498043 ARID4BQ4LE39 1312 aaPredicted RBP24.85■■□□□ 1.57
CHRNA4-206ENST00000498043 FBXO31Q5XUX0 539 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms