RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 APLP2Q06481 763 aa18.51■□□□□ 0.55
NUDCD3-211ENST00000497978 CAMSAP1Q5T5Y3 1602 aa18.5■□□□□ 0.55
NUDCD3-211ENST00000497978 MYO3AQ8NEV4 1616 aa18.49■□□□□ 0.55
NUDCD3-211ENST00000497978 MIA2Q96PC5 1412 aa18.49■□□□□ 0.55
NUDCD3-211ENST00000497978 FAM135AQ9P2D6 1515 aa18.48■□□□□ 0.55
NUDCD3-211ENST00000497978 MYOM3Q5VTT5 1437 aa18.48■□□□□ 0.55
NUDCD3-211ENST00000497978 ZNF142P52746 1687 aaPredicted RBP18.47■□□□□ 0.55
NUDCD3-211ENST00000497978 WASHC2CQ9Y4E1 1318 aa18.47■□□□□ 0.55
NUDCD3-211ENST00000497978 CEP170BQ9Y4F5 1589 aaPredicted RBP18.47■□□□□ 0.55
NUDCD3-211ENST00000497978 KDM5DQ9BY66 1539 aa18.46■□□□□ 0.55
NUDCD3-211ENST00000497978 PPP4R3CPQ6ZMV5 832 aa18.46■□□□□ 0.55
NUDCD3-211ENST00000497978 PKD2Q13563 968 aa18.45■□□□□ 0.54
NUDCD3-211ENST00000497978 MAST1Q9Y2H9 1570 aa18.44■□□□□ 0.54
NUDCD3-211ENST00000497978 PLA2R1Q13018 1463 aa18.44■□□□□ 0.54
NUDCD3-211ENST00000497978 NCKAP5LQ9HCH0 1330 aa18.44■□□□□ 0.54
NUDCD3-211ENST00000497978 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
NUDCD3-211ENST00000497978 PZPP20742 1482 aa18.42■□□□□ 0.54
NUDCD3-211ENST00000497978 TNRQ92752 1358 aa18.42■□□□□ 0.54
NUDCD3-211ENST00000497978 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
NUDCD3-211ENST00000497978 KCNA4P22459 653 aa18.39■□□□□ 0.53
NUDCD3-211ENST00000497978 TCOF1Q13428 1488 aaKnown RBP18.38■□□□□ 0.53
NUDCD3-211ENST00000497978 DNMT1P26358 1616 aaKnown RBP18.38■□□□□ 0.53
NUDCD3-211ENST00000497978 LTBP4Q8N2S1 1624 aa18.38■□□□□ 0.53
NUDCD3-211ENST00000497978 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
NUDCD3-211ENST00000497978 EIF2AK4Q9P2K8 1649 aaKnown RBP18.38■□□□□ 0.53
NUDCD3-211ENST00000497978 PTPN23Q9H3S7 1636 aa18.35■□□□□ 0.53
NUDCD3-211ENST00000497978 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
NUDCD3-211ENST00000497978 IQSEC2Q5JU85 1478 aa18.35■□□□□ 0.53
NUDCD3-211ENST00000497978 ZC3H13Q5T200 1668 aaKnown RBP18.34■□□□□ 0.53
NUDCD3-211ENST00000497978 NLRP1Q9C000 1473 aa18.33■□□□□ 0.53
NUDCD3-211ENST00000497978 SHANK2Q9UPX8 1470 aa18.33■□□□□ 0.53
NUDCD3-211ENST00000497978 ZNF335Q9H4Z2 1342 aaPredicted RBP18.33■□□□□ 0.53
NUDCD3-211ENST00000497978 THEMISQ8N1K5 641 aaPredicted RBP18.33■□□□□ 0.52
NUDCD3-211ENST00000497978 ABCC3O15438 1527 aa18.33■□□□□ 0.52
NUDCD3-211ENST00000497978 ABCC5O15440 1437 aa18.32■□□□□ 0.52
NUDCD3-211ENST00000497978 FGD6Q6ZV73 1430 aa18.32■□□□□ 0.52
NUDCD3-211ENST00000497978 KIF15Q9NS87 1388 aa18.31■□□□□ 0.52
NUDCD3-211ENST00000497978 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
NUDCD3-211ENST00000497978 CROCC2H7BZ55 1655 aa18.31■□□□□ 0.52
NUDCD3-211ENST00000497978 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
NUDCD3-211ENST00000497978 DAPK1P53355 1430 aa18.3■□□□□ 0.52
NUDCD3-211ENST00000497978 ERBINQ96RT1 1412 aa18.29■□□□□ 0.52
NUDCD3-211ENST00000497978 UGGT1Q9NYU2 1555 aa18.29■□□□□ 0.52
NUDCD3-211ENST00000497978 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
NUDCD3-211ENST00000497978 MROH1Q8NDA8 1641 aa18.28■□□□□ 0.52
NUDCD3-211ENST00000497978 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.28■□□□□ 0.52
NUDCD3-211ENST00000497978 SPATA31D1Q6ZQQ2 1576 aa18.27■□□□□ 0.52
NUDCD3-211ENST00000497978 CEP152O94986 1710 aa18.26■□□□□ 0.51
NUDCD3-211ENST00000497978 ANKRD30AQ9BXX3 1397 aa18.26■□□□□ 0.51
NUDCD3-211ENST00000497978 ERVK-7P63135 1459 aa18.26■□□□□ 0.51
NUDCD3-211ENST00000497978 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.511e-8■■□□□ 13.5
NUDCD3-211ENST00000497978 CHIC2Q9UKJ5 165 aa18.24■□□□□ 0.51
NUDCD3-211ENST00000497978 KANK1Q14678 1352 aa18.24■□□□□ 0.51
NUDCD3-211ENST00000497978 NEURL4Q96JN8 1562 aa18.24■□□□□ 0.51
NUDCD3-211ENST00000497978 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
NUDCD3-211ENST00000497978 CFAP65Q6ZU64 1925 aaKnown RBP18.23■□□□□ 0.51
NUDCD3-211ENST00000497978 UBAP1LF5GYI3 381 aa18.22■□□□□ 0.51
NUDCD3-211ENST00000497978 DEPDC5O75140 1603 aa18.22■□□□□ 0.51
NUDCD3-211ENST00000497978 FAM50AQ14320 339 aaKnown RBP18.21■□□□□ 0.51
NUDCD3-211ENST00000497978 NPHP4O75161 1426 aaPredicted RBP18.21■□□□□ 0.51
NUDCD3-211ENST00000497978 ARHGAP31Q2M1Z3 1444 aa18.21■□□□□ 0.51
NUDCD3-211ENST00000497978 MED14O60244 1454 aa18.2■□□□□ 0.5
NUDCD3-211ENST00000497978 CPS1P31327 1500 aa18.19■□□□□ 0.5
NUDCD3-211ENST00000497978 IQGAP1P46940 1657 aa18.16■□□□□ 0.5
NUDCD3-211ENST00000497978 UBR1Q8IWV7 1749 aa18.15■□□□□ 0.5
NUDCD3-211ENST00000497978 ADGRL2O95490 1459 aa18.15■□□□□ 0.5
NUDCD3-211ENST00000497978 DISP3Q9P2K9 1392 aa18.14■□□□□ 0.49
NUDCD3-211ENST00000497978 LMTK2Q8IWU2 1503 aa18.13■□□□□ 0.49
NUDCD3-211ENST00000497978 VWDEQ8N2E2 1590 aa18.13■□□□□ 0.49
NUDCD3-211ENST00000497978 TOM1O60784 492 aa18.13■□□□□ 0.49
NUDCD3-211ENST00000497978 STAG3Q9UJ98 1225 aa18.13■□□□□ 0.49
NUDCD3-211ENST00000497978 EID1Q9Y6B2 187 aa18.12■□□□□ 0.49
NUDCD3-211ENST00000497978 SCAF11Q99590 1463 aaKnown RBP18.12■□□□□ 0.49
NUDCD3-211ENST00000497978 TXNDC2Q86VQ3 553 aa18.11■□□□□ 0.49
NUDCD3-211ENST00000497978 SCAF1Q9H7N4 1312 aaKnown RBP18.11■□□□□ 0.49
NUDCD3-211ENST00000497978 ANKRD50Q9ULJ7 1429 aa18.1■□□□□ 0.49
NUDCD3-211ENST00000497978 SLIT1O75093 1534 aa18.09■□□□□ 0.49
NUDCD3-211ENST00000497978 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
NUDCD3-211ENST00000497978 NCBP3Q53F19 620 aaKnown RBP18.09■□□□□ 0.49
NUDCD3-211ENST00000497978 PIK3C2BO00750 1634 aa18.09■□□□□ 0.49
NUDCD3-211ENST00000497978 LTKP29376 864 aa18.08■□□□□ 0.48
NUDCD3-211ENST00000497978 PIP4K2BP78356 416 aa18.08■□□□□ 0.48
NUDCD3-211ENST00000497978 IDI1Q13907 227 aa18.07■□□□□ 0.48
NUDCD3-211ENST00000497978 EFCAB6Q5THR3 1501 aa18.07■□□□□ 0.48
NUDCD3-211ENST00000497978 TMEM2Q9UHN6 1383 aa18.06■□□□□ 0.48
NUDCD3-211ENST00000497978 KDM5AP29375 1690 aaKnown RBP18.05■□□□□ 0.48
NUDCD3-211ENST00000497978 SLC52A1Q9NWF4 448 aa18.04■□□□□ 0.48
NUDCD3-211ENST00000497978 NOS1P29475 1434 aa18.04■□□□□ 0.48
NUDCD3-211ENST00000497978 RPRD2Q5VT52 1461 aaKnown RBP18.03■□□□□ 0.48
NUDCD3-211ENST00000497978 SYNMO15061 1565 aa18.03■□□□□ 0.48
NUDCD3-211ENST00000497978 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
NUDCD3-211ENST00000497978 STRCP1A6NGW2 1772 aa18.02■□□□□ 0.48
NUDCD3-211ENST00000497978 ROCK1Q13464 1354 aa18.02■□□□□ 0.47
NUDCD3-211ENST00000497978 TET3O43151 1660 aa18■□□□□ 0.47
NUDCD3-211ENST00000497978 HSPA1LP34931 641 aa18■□□□□ 0.47
NUDCD3-211ENST00000497978 ADGRB3O60242 1522 aa17.99■□□□□ 0.47
NUDCD3-211ENST00000497978 ITGAEP38570 1179 aa17.99■□□□□ 0.47
NUDCD3-211ENST00000497978 PPARGC1BQ86YN6 1023 aaKnown RBP17.98■□□□□ 0.47
NUDCD3-211ENST00000497978 UNC13BO14795 1591 aa17.98■□□□□ 0.47
NUDCD3-211ENST00000497978 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms