RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 FAM135AQ9P2D6 1515 aa17.68■□□□□ 0.42
HPS1-213ENST00000497527 A2MP01023 1474 aa17.68■□□□□ 0.42
HPS1-213ENST00000497527 FRMPD1Q5SYB0 1578 aa17.67■□□□□ 0.42
HPS1-213ENST00000497527 DIP2CQ9Y2E4 1556 aa17.66■□□□□ 0.42
HPS1-213ENST00000497527 KANK1Q14678 1352 aa17.65■□□□□ 0.42
HPS1-213ENST00000497527 RNF17Q9BXT8 1623 aaKnown RBP17.65■□□□□ 0.42
HPS1-213ENST00000497527 PRDM15P57071 1507 aaPredicted RBP17.63■□□□□ 0.41
HPS1-213ENST00000497527 TONSLQ96HA7 1378 aa17.63■□□□□ 0.41
HPS1-213ENST00000497527 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
HPS1-213ENST00000497527 TET3O43151 1660 aa17.62■□□□□ 0.41
HPS1-213ENST00000497527 RAPGEF3O95398 923 aa17.62■□□□□ 0.41
HPS1-213ENST00000497527 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
HPS1-213ENST00000497527 PKD2Q13563 968 aa17.61■□□□□ 0.41
HPS1-213ENST00000497527 SIN3AQ96ST3 1273 aa17.61■□□□□ 0.41
HPS1-213ENST00000497527 REREQ9P2R6 1566 aa17.61■□□□□ 0.41
HPS1-213ENST00000497527 VWDEQ8N2E2 1590 aa17.6■□□□□ 0.41
HPS1-213ENST00000497527 RPRD2Q5VT52 1461 aaKnown RBP17.59■□□□□ 0.41
HPS1-213ENST00000497527 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.59■□□□□ 0.41
HPS1-213ENST00000497527 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.41
HPS1-213ENST00000497527 KIF3BO15066 747 aa17.58■□□□□ 0.4
HPS1-213ENST00000497527 ZC3H13Q5T200 1668 aaKnown RBP17.56■□□□□ 0.4
HPS1-213ENST00000497527 ATP10AO60312 1499 aa17.56■□□□□ 0.4
HPS1-213ENST00000497527 E9PCH4 1651 aa17.55■□□□□ 0.4
HPS1-213ENST00000497527 LMTK2Q8IWU2 1503 aa17.55■□□□□ 0.4
HPS1-213ENST00000497527 ARHGEF40Q8TER5 1519 aa17.55■□□□□ 0.4
HPS1-213ENST00000497527 YEATS2Q9ULM3 1422 aa17.54■□□□□ 0.4
HPS1-213ENST00000497527 CEP152O94986 1710 aa17.53■□□□□ 0.4
HPS1-213ENST00000497527 SPHKAPQ2M3C7 1700 aa17.53■□□□□ 0.4
HPS1-213ENST00000497527 FOXD1Q16676 465 aa17.53■□□□□ 0.4
HPS1-213ENST00000497527 AGLP35573 1532 aa17.52■□□□□ 0.4
HPS1-213ENST00000497527 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
HPS1-213ENST00000497527 EFCAB6Q5THR3 1501 aa17.51■□□□□ 0.39
HPS1-213ENST00000497527 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
HPS1-213ENST00000497527 PPP1R15AO75807 674 aaPredicted RBP17.49■□□□□ 0.39
HPS1-213ENST00000497527 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
HPS1-213ENST00000497527 TRPM2O94759 1503 aa17.47■□□□□ 0.39
HPS1-213ENST00000497527 CAMSAP1Q5T5Y3 1602 aa17.47■□□□□ 0.39
HPS1-213ENST00000497527 ABCC3O15438 1527 aa17.46■□□□□ 0.39
HPS1-213ENST00000497527 PPP6R1Q9UPN7 881 aa17.45■□□□□ 0.38
HPS1-213ENST00000497527 GGT6Q6P531 493 aa17.44■□□□□ 0.38
HPS1-213ENST00000497527 PTPRTO14522 1441 aa17.44■□□□□ 0.38
HPS1-213ENST00000497527 PLA2R1Q13018 1463 aa17.42■□□□□ 0.38
HPS1-213ENST00000497527 WASHC2CQ9Y4E1 1318 aa17.42■□□□□ 0.38
HPS1-213ENST00000497527 KIF1BO60333 1816 aa17.42■□□□□ 0.38
HPS1-213ENST00000497527 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
HPS1-213ENST00000497527 NEURL4Q96JN8 1562 aa17.4■□□□□ 0.38
HPS1-213ENST00000497527 ARHGAP31Q2M1Z3 1444 aa17.4■□□□□ 0.38
HPS1-213ENST00000497527 ZNF316A6NFI3 1004 aaPredicted RBP17.4■□□□□ 0.38
HPS1-213ENST00000497527 CLTCL1P53675 1640 aa17.38■□□□□ 0.37
HPS1-213ENST00000497527 CNTLNQ9NXG0 1405 aa17.38■□□□□ 0.37
HPS1-213ENST00000497527 CFAP65Q6ZU64 1925 aaKnown RBP17.37■□□□□ 0.37
HPS1-213ENST00000497527 NPATQ14207 1427 aa17.36■□□□□ 0.37
HPS1-213ENST00000497527 SIGLEC1Q9BZZ2 1709 aa17.35■□□□□ 0.37
HPS1-213ENST00000497527 CLTCQ00610 1675 aaKnown RBP17.34■□□□□ 0.37
HPS1-213ENST00000497527 PREX1Q8TCU6 1659 aa17.33■□□□□ 0.37
HPS1-213ENST00000497527 UHRF1BP1Q6BDS2 1440 aa17.33■□□□□ 0.36
HPS1-213ENST00000497527 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
HPS1-213ENST00000497527 NOS1P29475 1434 aa17.31■□□□□ 0.36
HPS1-213ENST00000497527 SPATA31E1Q6ZUB1 1445 aa17.31■□□□□ 0.36
HPS1-213ENST00000497527 PIK3C2BO00750 1634 aa17.3■□□□□ 0.36
HPS1-213ENST00000497527 ESF1Q9H501 851 aaKnown RBP17.3■□□□□ 0.36
HPS1-213ENST00000497527 MROH2AA6NES4 1674 aa17.29■□□□□ 0.36
HPS1-213ENST00000497527 RALGAPBQ86X10 1494 aa17.27■□□□□ 0.36
HPS1-213ENST00000497527 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.36
HPS1-213ENST00000497527 IFT172Q9UG01 1749 aa17.27■□□□□ 0.35
HPS1-213ENST00000497527 ARID4BQ4LE39 1312 aaPredicted RBP17.26■□□□□ 0.35
HPS1-213ENST00000497527 SYNMO15061 1565 aa17.26■□□□□ 0.35
HPS1-213ENST00000497527 ADGRB3O60242 1522 aa17.26■□□□□ 0.35
HPS1-213ENST00000497527 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
HPS1-213ENST00000497527 SLC52A1Q9NWF4 448 aa17.25■□□□□ 0.35
HPS1-213ENST00000497527 TRPM1Q7Z4N2 1603 aa17.25■□□□□ 0.35
HPS1-213ENST00000497527 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
HPS1-213ENST00000497527 NBPF8Q3BBV2 869 aa17.24■□□□□ 0.35
HPS1-213ENST00000497527 ERVK-7P63135 1459 aa17.24■□□□□ 0.35
HPS1-213ENST00000497527 SPATA31D1Q6ZQQ2 1576 aa17.23■□□□□ 0.35
HPS1-213ENST00000497527 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
HPS1-213ENST00000497527 FER1L4A9Z1Z3 1794 aa17.23■□□□□ 0.35
HPS1-213ENST00000497527 LAMC1P11047 1609 aa17.23■□□□□ 0.35
HPS1-213ENST00000497527 KIAA1210Q9ULL0 1709 aa17.23■□□□□ 0.35
HPS1-213ENST00000497527 EIF4G2P78344 907 aaKnown RBP eCLIP17.22■□□□□ 0.35
HPS1-213ENST00000497527 MLECQ14165 292 aa17.22■□□□□ 0.35
HPS1-213ENST00000497527 MYOM2P54296 1465 aa17.22■□□□□ 0.35
HPS1-213ENST00000497527 PPLO60437 1756 aa17.22■□□□□ 0.35
HPS1-213ENST00000497527 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
HPS1-213ENST00000497527 ZNF326Q5BKZ1 582 aaKnown RBP17.21■□□□□ 0.35
HPS1-213ENST00000497527 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
HPS1-213ENST00000497527 RPGRIP1LQ68CZ1 1315 aa17.21■□□□□ 0.34
HPS1-213ENST00000497527 POLR1AO95602 1720 aaPredicted RBP17.18■□□□□ 0.34
HPS1-213ENST00000497527 ZMYM3Q14202 1370 aa17.17■□□□□ 0.34
HPS1-213ENST00000497527 MYO5BQ9ULV0 1848 aa17.17■□□□□ 0.34
HPS1-213ENST00000497527 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
HPS1-213ENST00000497527 TMEM131LA2VDJ0 1609 aa17.16■□□□□ 0.34
HPS1-213ENST00000497527 KDM5AP29375 1690 aaKnown RBP17.16■□□□□ 0.34
HPS1-213ENST00000497527 ROCK2O75116 1388 aaKnown RBP17.15■□□□□ 0.34
HPS1-213ENST00000497527 CHGAP10645 457 aaKnown RBP17.15■□□□□ 0.34
HPS1-213ENST00000497527 GPRASP1Q5JY77 1395 aa17.15■□□□□ 0.34
HPS1-213ENST00000497527 C3P01024 1663 aa17.13■□□□□ 0.33
HPS1-213ENST00000497527 HSPA5P11021 654 aaKnown RBP17.13■□□□□ 0.33
HPS1-213ENST00000497527 CARD11Q9BXL7 1154 aa17.13■□□□□ 0.33
HPS1-213ENST00000497527 NRXN1Q9ULB1 1477 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms