RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 ARAP3Q8WWN8 1544 aa11.87□□□□□ -0.51
TMC1-206ENST00000497073 CASKIN1Q8WXD9 1431 aa11.86□□□□□ -0.51
TMC1-206ENST00000497073 EFCAB2Q5VUJ9 269 aa11.86□□□□□ -0.51
TMC1-206ENST00000497073 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
TMC1-206ENST00000497073 HRCP23327 699 aa11.85□□□□□ -0.51
TMC1-206ENST00000497073 CDK13Q14004 1512 aaKnown RBP11.85□□□□□ -0.51
TMC1-206ENST00000497073 RAPGEF3O95398 923 aa11.84□□□□□ -0.51
TMC1-206ENST00000497073 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
TMC1-206ENST00000497073 TROQ12816 1431 aaPredicted RBP11.84□□□□□ -0.51
TMC1-206ENST00000497073 FANCAO15360 1455 aa11.83□□□□□ -0.52
TMC1-206ENST00000497073 KDM4FA0A1W2PPD8 638 aa11.83□□□□□ -0.52
TMC1-206ENST00000497073 PLCH2O75038 1416 aa11.83□□□□□ -0.52
TMC1-206ENST00000497073 AKNAQ7Z591 1439 aa11.83□□□□□ -0.52
TMC1-206ENST00000497073 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.82□□□□□ -0.52
TMC1-206ENST00000497073 FAM205CA6NFA0 338 aa11.82□□□□□ -0.52
TMC1-206ENST00000497073 DENND4BO75064 1496 aaPredicted RBP11.82□□□□□ -0.52
TMC1-206ENST00000497073 FYCO1Q9BQS8 1478 aa11.81□□□□□ -0.52
TMC1-206ENST00000497073 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.8□□□□□ -0.52
TMC1-206ENST00000497073 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
TMC1-206ENST00000497073 RASEFQ8IZ41 740 aa11.79□□□□□ -0.52
TMC1-206ENST00000497073 ARID4BQ4LE39 1312 aaPredicted RBP11.79□□□□□ -0.52
TMC1-206ENST00000497073 CEP162Q5TB80 1403 aa11.78□□□□□ -0.52
TMC1-206ENST00000497073 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
TMC1-206ENST00000497073 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
TMC1-206ENST00000497073 KIF14Q15058 1648 aa11.78□□□□□ -0.52
TMC1-206ENST00000497073 MYT1LQ9UL68 1186 aa11.77□□□□□ -0.53
TMC1-206ENST00000497073 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
TMC1-206ENST00000497073 SCAPERQ9BY12 1400 aa11.77□□□□□ -0.53
TMC1-206ENST00000497073 ADGRL1O94910 1474 aa11.76□□□□□ -0.53
TMC1-206ENST00000497073 MTUS2Q5JR59 1369 aa11.76□□□□□ -0.53
TMC1-206ENST00000497073 PCF11O94913 1555 aaKnown RBP11.75□□□□□ -0.53
TMC1-206ENST00000497073 MYT1Q01538 1121 aa11.75□□□□□ -0.53
TMC1-206ENST00000497073 TTC37Q6PGP7 1564 aa11.75□□□□□ -0.53
TMC1-206ENST00000497073 RNF166Q96A37 237 aaPredicted RBP11.74□□□□□ -0.53
TMC1-206ENST00000497073 TMEM106CQ9BVX2 250 aa11.74□□□□□ -0.53
TMC1-206ENST00000497073 MAGI2Q86UL8 1455 aa11.74□□□□□ -0.53
TMC1-206ENST00000497073 ARHGAP5Q13017 1502 aa11.74□□□□□ -0.53
TMC1-206ENST00000497073 CFDP1Q9UEE9 299 aaPredicted RBP11.73□□□□□ -0.53
TMC1-206ENST00000497073 POGZQ7Z3K3 1410 aa11.72□□□□□ -0.53
TMC1-206ENST00000497073 ZNF777Q9ULD5 760 aaPredicted RBP11.72□□□□□ -0.53
TMC1-206ENST00000497073 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
TMC1-206ENST00000497073 OCEL1Q9H607 264 aa11.71□□□□□ -0.53
TMC1-206ENST00000497073 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
TMC1-206ENST00000497073 IFNL1Q8IU54 200 aa11.7□□□□□ -0.54
TMC1-206ENST00000497073 AFAP1Q8N556 730 aa11.7□□□□□ -0.54
TMC1-206ENST00000497073 MYO5CQ9NQX4 1742 aa11.69□□□□□ -0.54
TMC1-206ENST00000497073 ZMYM4Q5VZL5 1548 aa11.67□□□□□ -0.54
TMC1-206ENST00000497073 ZFYVE16Q7Z3T8 1539 aa11.67□□□□□ -0.54
TMC1-206ENST00000497073 VPS8Q8N3P4 1428 aa11.67□□□□□ -0.54
TMC1-206ENST00000497073 FRMPD1Q5SYB0 1578 aa11.67□□□□□ -0.54
TMC1-206ENST00000497073 ATP10AO60312 1499 aa11.66□□□□□ -0.54
TMC1-206ENST00000497073 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.54
TMC1-206ENST00000497073 PLEKHH2Q8IVE3 1493 aa11.65□□□□□ -0.54
TMC1-206ENST00000497073 RSPH4AQ5TD94 716 aa11.65□□□□□ -0.54
TMC1-206ENST00000497073 YEATS2Q9ULM3 1422 aa11.65□□□□□ -0.54
TMC1-206ENST00000497073 ARHGEF40Q8TER5 1519 aa11.65□□□□□ -0.55
TMC1-206ENST00000497073 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
TMC1-206ENST00000497073 LRRIQ1Q96JM4 1722 aa11.64□□□□□ -0.55
TMC1-206ENST00000497073 C9orf84Q5VXU9 1444 aa11.64□□□□□ -0.55
TMC1-206ENST00000497073 HNRNPMP52272 730 aaKnown RBP eCLIP11.64□□□□□ -0.55
TMC1-206ENST00000497073 MLECQ14165 292 aa11.64□□□□□ -0.55
TMC1-206ENST00000497073 ESF1Q9H501 851 aaKnown RBP11.64□□□□□ -0.55
TMC1-206ENST00000497073 EHBP1L1Q8N3D4 1523 aa11.64□□□□□ -0.55
TMC1-206ENST00000497073 SPAG9O60271 1321 aaKnown RBP11.63□□□□□ -0.55
TMC1-206ENST00000497073 KIAA1107Q9UPP5 1409 aa11.63□□□□□ -0.55
TMC1-206ENST00000497073 PREX2Q70Z35 1606 aa11.63□□□□□ -0.55
TMC1-206ENST00000497073 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
TMC1-206ENST00000497073 TRAPPC8Q9Y2L5 1435 aa11.61□□□□□ -0.55
TMC1-206ENST00000497073 ABCC1P33527 1531 aa11.6□□□□□ -0.55
TMC1-206ENST00000497073 PTPRMP28827 1452 aa11.6□□□□□ -0.55
TMC1-206ENST00000497073 KDM5CP41229 1560 aa11.59□□□□□ -0.55
TMC1-206ENST00000497073 TSPY4P0CV99 314 aa11.59□□□□□ -0.55
TMC1-206ENST00000497073 TSPY10P0CW01 314 aa11.59□□□□□ -0.55
TMC1-206ENST00000497073 CDC42BPBQ9Y5S2 1711 aa11.59□□□□□ -0.55
TMC1-206ENST00000497073 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
TMC1-206ENST00000497073 ARHGEF12Q9NZN5 1544 aa11.58□□□□□ -0.56
TMC1-206ENST00000497073 HECW2Q9P2P5 1572 aa11.58□□□□□ -0.56
TMC1-206ENST00000497073 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
TMC1-206ENST00000497073 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
TMC1-206ENST00000497073 TIAM1Q13009 1591 aa11.57□□□□□ -0.56
TMC1-206ENST00000497073 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
TMC1-206ENST00000497073 ZNF644Q9H582 1327 aaPredicted RBP11.57□□□□□ -0.56
TMC1-206ENST00000497073 ADAMTSL3P82987 1691 aa11.56□□□□□ -0.56
TMC1-206ENST00000497073 CDC42BPAQ5VT25 1732 aa11.56□□□□□ -0.56
TMC1-206ENST00000497073 SYCP2Q9BX26 1530 aa11.55□□□□□ -0.56
TMC1-206ENST00000497073 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
TMC1-206ENST00000497073 SAMD9LQ8IVG5 1584 aa11.55□□□□□ -0.56
TMC1-206ENST00000497073 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
TMC1-206ENST00000497073 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
TMC1-206ENST00000497073 ITSN2Q9NZM3 1697 aa11.54□□□□□ -0.56
TMC1-206ENST00000497073 REREQ9P2R6 1566 aa11.54□□□□□ -0.56
TMC1-206ENST00000497073 RTEL1-TNFRSF6BF6WH68 1400 aa11.53□□□□□ -0.56
TMC1-206ENST00000497073 AGLP35573 1532 aa11.53□□□□□ -0.56
TMC1-206ENST00000497073 MADDQ8WXG6 1647 aa11.53□□□□□ -0.56
TMC1-206ENST00000497073 MIA2Q96PC5 1412 aa11.52□□□□□ -0.56
TMC1-206ENST00000497073 DIP2CQ9Y2E4 1556 aa11.52□□□□□ -0.57
TMC1-206ENST00000497073 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
TMC1-206ENST00000497073 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
TMC1-206ENST00000497073 GGT6Q6P531 493 aa11.51□□□□□ -0.57
TMC1-206ENST00000497073 A2MP01023 1474 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms