RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ANO8Q9HCE9 1232 aaPredicted RBP5.33□□□□□ -1.56
SNRNP48-202ENST00000496946 ZSWIM6Q9HCJ5 1215 aa5.33□□□□□ -1.56
SNRNP48-202ENST00000496946 ARHGEF1Q92888 912 aaKnown RBP5.32□□□□□ -1.56
SNRNP48-202ENST00000496946 SEPT9Q9UHD8 586 aaPredicted RBP5.31□□□□□ -1.56
SNRNP48-202ENST00000496946 ZDHHC16Q969W1 377 aa5.3□□□□□ -1.56
SNRNP48-202ENST00000496946 JPH4Q96JJ6 628 aa5.3□□□□□ -1.56
SNRNP48-202ENST00000496946 C6orf132Q5T0Z8 1188 aa5.3□□□□□ -1.56
SNRNP48-202ENST00000496946 ZNF687Q8N1G0 1237 aa5.3□□□□□ -1.56
SNRNP48-202ENST00000496946 P3H3Q8IVL6 736 aa5.29□□□□□ -1.56
SNRNP48-202ENST00000496946 FAM198AQ9UFP1 575 aa5.29□□□□□ -1.56
SNRNP48-202ENST00000496946 NUTM2FA1L443 756 aa5.29□□□□□ -1.56
SNRNP48-202ENST00000496946 NPDC1Q9NQX5 325 aaPredicted RBP5.29□□□□□ -1.56
SNRNP48-202ENST00000496946 LSM11P83369 360 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNRNP48-202ENST00000496946 PPP4R3BQ5MIZ7 849 aa5.28□□□□□ -1.56
SNRNP48-202ENST00000496946 EN1Q05925 392 aaPredicted RBP5.28□□□□□ -1.56
SNRNP48-202ENST00000496946 TESPA1A2RU30 521 aaPredicted RBP5.27□□□□□ -1.57
SNRNP48-202ENST00000496946 BCL2L12Q9HB09 334 aa5.27□□□□□ -1.57
SNRNP48-202ENST00000496946 TSKSQ9UJT2 592 aa5.27□□□□□ -1.57
SNRNP48-202ENST00000496946 ARHGAP33O14559 1287 aa5.26□□□□□ -1.57
SNRNP48-202ENST00000496946 PHF14O94880 888 aa5.26□□□□□ -1.57
SNRNP48-202ENST00000496946 ADGRD1Q6QNK2 874 aa5.26□□□□□ -1.57
SNRNP48-202ENST00000496946 ARIH1Q9Y4X5 557 aaPredicted RBP5.26□□□□□ -1.57
SNRNP48-202ENST00000496946 PTPREP23469 700 aa5.25□□□□□ -1.57
SNRNP48-202ENST00000496946 SPNS2Q8IVW8 549 aa5.25□□□□□ -1.57
SNRNP48-202ENST00000496946 TYW1BQ6NUM6 668 aa5.25□□□□□ -1.57
SNRNP48-202ENST00000496946 ZBED2Q9BTP6 218 aa5.25□□□□□ -1.57
SNRNP48-202ENST00000496946 PTGER2P43116 358 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 PADI6Q6TGC4 694 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 PTGDRQ13258 359 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 CDCA7LQ96GN5 454 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 PHOX2BQ99453 314 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 VPS9D1Q9Y2B5 631 aa5.24□□□□□ -1.57
SNRNP48-202ENST00000496946 KIAA1468Q9P260 1216 aa5.23□□□□□ -1.57
SNRNP48-202ENST00000496946 GPR37O15354 613 aa5.23□□□□□ -1.57
SNRNP48-202ENST00000496946 LMOD2Q6P5Q4 547 aa5.23□□□□□ -1.57
SNRNP48-202ENST00000496946 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.23□□□□□ -1.57
SNRNP48-202ENST00000496946 SPDYE16A6NNV3 312 aaPredicted RBP5.22□□□□□ -1.57
SNRNP48-202ENST00000496946 RNF40O75150 1001 aa5.21□□□□□ -1.58
SNRNP48-202ENST00000496946 KCTD12Q96CX2 325 aaKnown RBP5.21□□□□□ -1.58
SNRNP48-202ENST00000496946 PPP1R3GB7ZBB8 358 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 BCAMP50895 628 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 PTPN5P54829 565 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 MMRN1Q13201 1228 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 NUDT18Q6ZVK8 323 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 HRO43593 1189 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 GPIHBP1Q8IV16 184 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 FBXW7Q969H0 707 aa5.2□□□□□ -1.58
SNRNP48-202ENST00000496946 ARXQ96QS3 562 aa5.19□□□□□ -1.58
SNRNP48-202ENST00000496946 EPAS1Q99814 870 aa5.18□□□□□ -1.58
SNRNP48-202ENST00000496946 PSDA5PKW4 1024 aaPredicted RBP5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 TRIM6-TRIM34B2RNG4 842 aa5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 BHMG1C9JSJ3 638 aaPredicted RBP5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 PRSS12P56730 875 aa5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 ONECUT3O60422 494 aaPredicted RBP5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 PNMA3Q9UL41 463 aa5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 MYT1LQ9UL68 1186 aa5.17□□□□□ -1.58
SNRNP48-202ENST00000496946 ZC3H15Q8WU90 426 aaKnown RBP5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 SAMD7Q7Z3H4 446 aa5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 MRPL50Q8N5N7 158 aaKnown RBP5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 ZFRQ96KR1 1074 aaKnown RBP5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 KCNH8Q96L42 1107 aa5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 TIMELESSQ9UNS1 1208 aa5.16□□□□□ -1.58
SNRNP48-202ENST00000496946 PBX2P40425 430 aa5.15□□□□□ -1.58
SNRNP48-202ENST00000496946 REPIN1Q9BWE0 567 aaKnown RBP5.15□□□□□ -1.59
SNRNP48-202ENST00000496946 WBP1LQ9NX94 342 aa5.15□□□□□ -1.59
SNRNP48-202ENST00000496946 RABGEF1Q9UJ41 708 aa5.15□□□□□ -1.59
SNRNP48-202ENST00000496946 TATDN2Q93075 761 aa5.14□□□□□ -1.59
SNRNP48-202ENST00000496946 RNF166Q96A37 237 aaPredicted RBP5.14□□□□□ -1.59
SNRNP48-202ENST00000496946 BCANQ96GW7 911 aa5.14□□□□□ -1.59
SNRNP48-202ENST00000496946 GNPATO15228 680 aa5.14□□□□□ -1.59
SNRNP48-202ENST00000496946 SLC24A3Q9HC58 644 aa5.14□□□□□ -1.59
SNRNP48-202ENST00000496946 METTL3Q86U44 580 aaKnown RBP5.13□□□□□ -1.59
SNRNP48-202ENST00000496946 RANGAP1P46060 587 aaPredicted RBP5.13□□□□□ -1.59
SNRNP48-202ENST00000496946 TPRNQ4KMQ1 711 aa5.13□□□□□ -1.59
SNRNP48-202ENST00000496946 WNT2BQ93097 391 aa5.13□□□□□ -1.59
SNRNP48-202ENST00000496946 ADGRG1Q9Y653 693 aa5.13□□□□□ -1.59
SNRNP48-202ENST00000496946 FCHSD2O94868 740 aa5.12□□□□□ -1.59
SNRNP48-202ENST00000496946 CCDC102AQ96A19 550 aa5.12□□□□□ -1.59
SNRNP48-202ENST00000496946 HIC1Q14526 733 aa5.12□□□□□ -1.59
SNRNP48-202ENST00000496946 RCCD1A6NED2 376 aa5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 SWT1Q5T5J6 900 aaKnown RBP5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 TULP1O00294 542 aaPredicted RBP5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 EIF5BO60841 1220 aaKnown RBP5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 HLA-CQ95604 372 aa5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 EYA1Q99502 592 aa5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 GPBP1L1Q9HC44 474 aaPredicted RBP5.11□□□□□ -1.59
SNRNP48-202ENST00000496946 TTC13Q8NBP0 860 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 MDM2Q00987 491 aaPredicted RBP5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 NBPF3Q9H094 633 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 ZMYND10O75800 440 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 FAM98CQ17RN3 349 aaKnown RBP5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 SMYD5Q6GMV2 418 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 THSD4Q6ZMP0 1018 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 PACS2Q86VP3 889 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 PXYLP1Q8TE99 480 aa5.1□□□□□ -1.59
SNRNP48-202ENST00000496946 GOLGA8CPA6NN73 597 aa5.09□□□□□ -1.59
SNRNP48-202ENST00000496946 TK2O00142 265 aa5.09□□□□□ -1.59
SNRNP48-202ENST00000496946 PUS10Q3MIT2 529 aaKnown RBP5.09□□□□□ -1.59
SNRNP48-202ENST00000496946 KRI1Q8N9T8 703 aaKnown RBP5.09□□□□□ -1.59
SNRNP48-202ENST00000496946 IRF6O14896 467 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms