RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 KDM5CP41229 1560 aa20.56■□□□□ 0.88
UBXN11-216ENST00000496466 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
UBXN11-216ENST00000496466 MRS2Q9HD23 443 aa20.55■□□□□ 0.88
UBXN11-216ENST00000496466 AFAP1Q8N556 730 aa20.53■□□□□ 0.88
UBXN11-216ENST00000496466 DCAF11Q8TEB1 546 aa20.53■□□□□ 0.88
UBXN11-216ENST00000496466 RALGAPBQ86X10 1494 aa20.53■□□□□ 0.88
UBXN11-216ENST00000496466 ERBINQ96RT1 1412 aa20.52■□□□□ 0.88
UBXN11-216ENST00000496466 FAM9BQ8IZU0 186 aa20.52■□□□□ 0.88
UBXN11-216ENST00000496466 ARAP3Q8WWN8 1544 aa20.52■□□□□ 0.88
UBXN11-216ENST00000496466 PLA2R1Q13018 1463 aa20.52■□□□□ 0.87
UBXN11-216ENST00000496466 IQGAP3Q86VI3 1631 aa20.51■□□□□ 0.87
UBXN11-216ENST00000496466 OSCARQ8IYS5 282 aa20.51■□□□□ 0.87
UBXN11-216ENST00000496466 DHX29Q7Z478 1369 aaKnown RBP20.51■□□□□ 0.87
UBXN11-216ENST00000496466 SPAG9O60271 1321 aaKnown RBP20.51■□□□□ 0.87
UBXN11-216ENST00000496466 CCDC144AA2RUR9 1427 aa20.5■□□□□ 0.87
UBXN11-216ENST00000496466 ARID4BQ4LE39 1312 aaPredicted RBP20.5■□□□□ 0.87
UBXN11-216ENST00000496466 MAGI2Q86UL8 1455 aa20.48■□□□□ 0.87
UBXN11-216ENST00000496466 CARD11Q9BXL7 1154 aa20.48■□□□□ 0.87
UBXN11-216ENST00000496466 ASXL2Q76L83 1435 aa20.48■□□□□ 0.87
UBXN11-216ENST00000496466 FANCAO15360 1455 aa20.47■□□□□ 0.87
UBXN11-216ENST00000496466 ABCA9Q8IUA7 1624 aa20.46■□□□□ 0.87
UBXN11-216ENST00000496466 RGL3Q3MIN7 710 aa20.45■□□□□ 0.87
UBXN11-216ENST00000496466 POLR3GLQ9BT43 218 aa20.45■□□□□ 0.87
UBXN11-216ENST00000496466 RTEL1-TNFRSF6BF6WH68 1400 aa20.45■□□□□ 0.86
UBXN11-216ENST00000496466 ZFYVE16Q7Z3T8 1539 aa20.45■□□□□ 0.86
UBXN11-216ENST00000496466 ZBED9Q6R2W3 1325 aa20.45■□□□□ 0.86
UBXN11-216ENST00000496466 ROCK2O75116 1388 aaKnown RBP20.41■□□□□ 0.86
UBXN11-216ENST00000496466 IRX6P78412 446 aaPredicted RBP20.41■□□□□ 0.86
UBXN11-216ENST00000496466 PRAG1Q86YV5 1406 aa20.4■□□□□ 0.86
UBXN11-216ENST00000496466 ADGRL1O94910 1474 aa20.4■□□□□ 0.86
UBXN11-216ENST00000496466 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
UBXN11-216ENST00000496466 A2MP01023 1474 aa20.39■□□□□ 0.86
UBXN11-216ENST00000496466 ST20-MTHFSA0A0A6YYL1 179 aa20.39■□□□□ 0.85
UBXN11-216ENST00000496466 ATP10AO60312 1499 aa20.39■□□□□ 0.85
UBXN11-216ENST00000496466 ATP7AQ04656 1500 aa20.38■□□□□ 0.85
UBXN11-216ENST00000496466 NPM1P06748 294 aaKnown RBP eCLIP20.37■□□□□ 0.85
UBXN11-216ENST00000496466 ERICH6BQ5W0A0 696 aa20.37■□□□□ 0.85
UBXN11-216ENST00000496466 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
UBXN11-216ENST00000496466 INO80Q9ULG1 1556 aaPredicted RBP20.36■□□□□ 0.85
UBXN11-216ENST00000496466 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
UBXN11-216ENST00000496466 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
UBXN11-216ENST00000496466 TRPM1Q7Z4N2 1603 aa20.35■□□□□ 0.85
UBXN11-216ENST00000496466 E9PCH4 1651 aa20.33■□□□□ 0.84
UBXN11-216ENST00000496466 RBM19Q9Y4C8 960 aaKnown RBP20.31■□□□□ 0.84
UBXN11-216ENST00000496466 DEPDC5O75140 1603 aa20.31■□□□□ 0.84
UBXN11-216ENST00000496466 KIF3BO15066 747 aa20.31■□□□□ 0.84
UBXN11-216ENST00000496466 PPP4R2Q9NY27 417 aa20.28■□□□□ 0.84
UBXN11-216ENST00000496466 GPRASP1Q5JY77 1395 aa20.28■□□□□ 0.84
UBXN11-216ENST00000496466 PNISRQ8TF01 805 aaKnown RBP20.27■□□□□ 0.84
UBXN11-216ENST00000496466 CD109Q6YHK3 1445 aa20.26■□□□□ 0.83
UBXN11-216ENST00000496466 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
UBXN11-216ENST00000496466 KANK1Q14678 1352 aa20.26■□□□□ 0.83
UBXN11-216ENST00000496466 PTPRTO14522 1441 aa20.25■□□□□ 0.83
UBXN11-216ENST00000496466 TRPM2O94759 1503 aa20.25■□□□□ 0.83
UBXN11-216ENST00000496466 VWDEQ8N2E2 1590 aa20.25■□□□□ 0.83
UBXN11-216ENST00000496466 TMC1Q8TDI8 760 aa20.25■□□□□ 0.83
UBXN11-216ENST00000496466 KTN1Q86UP2 1357 aaKnown RBP20.24■□□□□ 0.83
UBXN11-216ENST00000496466 KIDINS220Q9ULH0 1771 aa20.24■□□□□ 0.83
UBXN11-216ENST00000496466 TET3O43151 1660 aa20.24■□□□□ 0.83
UBXN11-216ENST00000496466 ANP32EQ9BTT0 268 aa20.24■□□□□ 0.83
UBXN11-216ENST00000496466 ZNF518AQ6AHZ1 1483 aa20.23■□□□□ 0.83
UBXN11-216ENST00000496466 LAMC1P11047 1609 aa20.23■□□□□ 0.83
UBXN11-216ENST00000496466 RALBP1Q15311 655 aa20.23■□□□□ 0.83
UBXN11-216ENST00000496466 SPHKAPQ2M3C7 1700 aa20.23■□□□□ 0.83
UBXN11-216ENST00000496466 EIF2AK4Q9P2K8 1649 aaKnown RBP20.23■□□□□ 0.83
UBXN11-216ENST00000496466 MROH1Q8NDA8 1641 aa20.22■□□□□ 0.83
UBXN11-216ENST00000496466 MYBBP1AQ9BQG0 1328 aaKnown RBP20.22■□□□□ 0.83
UBXN11-216ENST00000496466 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
UBXN11-216ENST00000496466 CLTCL1P53675 1640 aa20.21■□□□□ 0.83
UBXN11-216ENST00000496466 BRD4O60885 1362 aaPredicted RBP20.21■□□□□ 0.83
UBXN11-216ENST00000496466 NUDCQ9Y266 331 aa20.21■□□□□ 0.83
UBXN11-216ENST00000496466 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
UBXN11-216ENST00000496466 CEP152O94986 1710 aa20.18■□□□□ 0.82
UBXN11-216ENST00000496466 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
UBXN11-216ENST00000496466 TESK2Q96S53 571 aa20.18■□□□□ 0.82
UBXN11-216ENST00000496466 COL17A1Q9UMD9 1497 aaPredicted RBP20.17■□□□□ 0.82
UBXN11-216ENST00000496466 CFAP74Q9C0B2 1584 aa20.16■□□□□ 0.82
UBXN11-216ENST00000496466 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
UBXN11-216ENST00000496466 DISP3Q9P2K9 1392 aa20.16■□□□□ 0.82
UBXN11-216ENST00000496466 RNF17Q9BXT8 1623 aaKnown RBP20.15■□□□□ 0.82
UBXN11-216ENST00000496466 BCL11AQ9H165 835 aa20.15■□□□□ 0.82
UBXN11-216ENST00000496466 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
UBXN11-216ENST00000496466 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
UBXN11-216ENST00000496466 PER1O15534 1290 aaPredicted RBP20.14■□□□□ 0.81
UBXN11-216ENST00000496466 B4GALNT3Q6L9W6 998 aa20.14■□□□□ 0.81
UBXN11-216ENST00000496466 UGGT1Q9NYU2 1555 aa20.13■□□□□ 0.81
UBXN11-216ENST00000496466 MLH3Q9UHC1 1453 aa20.12■□□□□ 0.81
UBXN11-216ENST00000496466 SENP3-EIF4A1A0A087X0R7 540 aa20.12■□□□□ 0.81
UBXN11-216ENST00000496466 EFCAB6Q5THR3 1501 aa20.12■□□□□ 0.81
UBXN11-216ENST00000496466 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
UBXN11-216ENST00000496466 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
UBXN11-216ENST00000496466 NLRP13Q86W25 1043 aa20.1■□□□□ 0.81
UBXN11-216ENST00000496466 RAPGEF3O95398 923 aa20.1■□□□□ 0.81
UBXN11-216ENST00000496466 HECW2Q9P2P5 1572 aa20.1■□□□□ 0.81
UBXN11-216ENST00000496466 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
UBXN11-216ENST00000496466 TMF1P82094 1093 aa20.09■□□□□ 0.81
UBXN11-216ENST00000496466 CYB5RLQ6IPT4 315 aa20.08■□□□□ 0.81
UBXN11-216ENST00000496466 GGT6Q6P531 493 aa20.08■□□□□ 0.81
UBXN11-216ENST00000496466 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.81
UBXN11-216ENST00000496466 NEO1Q92859 1461 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms