RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 ATP10AO60312 1499 aa13.47□□□□□ -0.25
SURF1-204ENST00000495952 SYCP2Q9BX26 1530 aa13.46□□□□□ -0.25
SURF1-204ENST00000495952 PKD2Q13563 968 aa13.46□□□□□ -0.25
SURF1-204ENST00000495952 NUP155O75694 1391 aa13.45□□□□□ -0.26
SURF1-204ENST00000495952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.45□□□□□ -0.26
SURF1-204ENST00000495952 DUOX2Q9NRD8 1548 aa13.45□□□□□ -0.26
SURF1-204ENST00000495952 INSRP06213 1382 aa13.45□□□□□ -0.26
SURF1-204ENST00000495952 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
SURF1-204ENST00000495952 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
SURF1-204ENST00000495952 CEP152O94986 1710 aa13.43□□□□□ -0.26
SURF1-204ENST00000495952 TSPY4P0CV99 314 aa13.43□□□□□ -0.26
SURF1-204ENST00000495952 TSPY10P0CW01 314 aa13.43□□□□□ -0.26
SURF1-204ENST00000495952 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
SURF1-204ENST00000495952 BRD4O60885 1362 aaPredicted RBP13.43□□□□□ -0.26
SURF1-204ENST00000495952 RNF123Q5XPI4 1314 aa13.42□□□□□ -0.26
SURF1-204ENST00000495952 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
SURF1-204ENST00000495952 CCDC184Q52MB2 194 aa13.42□□□□□ -0.26
SURF1-204ENST00000495952 ARHGAP5Q13017 1502 aa13.42□□□□□ -0.26
SURF1-204ENST00000495952 LRPPRCP42704 1394 aaKnown RBP13.42□□□□□ -0.26
SURF1-204ENST00000495952 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
SURF1-204ENST00000495952 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
SURF1-204ENST00000495952 NEURL4Q96JN8 1562 aa13.41□□□□□ -0.26
SURF1-204ENST00000495952 IQGAP1P46940 1657 aa13.41□□□□□ -0.26
SURF1-204ENST00000495952 DEPDC5O75140 1603 aa13.41□□□□□ -0.26
SURF1-204ENST00000495952 ABCC1P33527 1531 aa13.4□□□□□ -0.26
SURF1-204ENST00000495952 KIAA1210Q9ULL0 1709 aa13.4□□□□□ -0.26
SURF1-204ENST00000495952 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
SURF1-204ENST00000495952 CCDC144AA2RUR9 1427 aa13.39□□□□□ -0.27
SURF1-204ENST00000495952 ZCCHC11Q5TAX3 1644 aaKnown RBP13.39□□□□□ -0.27
SURF1-204ENST00000495952 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
SURF1-204ENST00000495952 FAM9BQ8IZU0 186 aa13.38□□□□□ -0.27
SURF1-204ENST00000495952 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
SURF1-204ENST00000495952 A2MP01023 1474 aa13.37□□□□□ -0.27
SURF1-204ENST00000495952 RALBP1Q15311 655 aa13.37□□□□□ -0.27
SURF1-204ENST00000495952 MYBBP1AQ9BQG0 1328 aaKnown RBP13.37□□□□□ -0.27
SURF1-204ENST00000495952 MADDQ8WXG6 1647 aa13.36□□□□□ -0.27
SURF1-204ENST00000495952 CLASP1Q7Z460 1538 aa13.36□□□□□ -0.27
SURF1-204ENST00000495952 TET3O43151 1660 aa13.35□□□□□ -0.27
SURF1-204ENST00000495952 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
SURF1-204ENST00000495952 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
SURF1-204ENST00000495952 TRPM2O94759 1503 aa13.34□□□□□ -0.27
SURF1-204ENST00000495952 PARD3Q8TEW0 1356 aa13.34□□□□□ -0.27
SURF1-204ENST00000495952 PLA2R1Q13018 1463 aa13.33□□□□□ -0.28
SURF1-204ENST00000495952 SYNMO15061 1565 aa13.32□□□□□ -0.28
SURF1-204ENST00000495952 PNISRQ8TF01 805 aaKnown RBP13.32□□□□□ -0.28
SURF1-204ENST00000495952 INO80Q9ULG1 1556 aaPredicted RBP13.32□□□□□ -0.28
SURF1-204ENST00000495952 FBLN2P98095 1184 aa13.31□□□□□ -0.28
SURF1-204ENST00000495952 RTEL1-TNFRSF6BF6WH68 1400 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 PLCH2O75038 1416 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 WDR7Q9Y4E6 1490 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 ZFYVE16Q7Z3T8 1539 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 MYT1LQ9UL68 1186 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 ABCA9Q8IUA7 1624 aa13.3□□□□□ -0.28
SURF1-204ENST00000495952 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
SURF1-204ENST00000495952 VWDEQ8N2E2 1590 aa13.29□□□□□ -0.28
SURF1-204ENST00000495952 IFT172Q9UG01 1749 aa13.29□□□□□ -0.28
SURF1-204ENST00000495952 MYOM1P52179 1685 aa13.28□□□□□ -0.28
SURF1-204ENST00000495952 HNRNPMP52272 730 aaKnown RBP eCLIP13.28□□□□□ -0.28
SURF1-204ENST00000495952 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
SURF1-204ENST00000495952 PDE3BQ13370 1112 aa13.28□□□□□ -0.28
SURF1-204ENST00000495952 ZNF326Q5BKZ1 582 aaKnown RBP13.27□□□□□ -0.29
SURF1-204ENST00000495952 NLRP13Q86W25 1043 aa13.27□□□□□ -0.29
SURF1-204ENST00000495952 TMC1Q8TDI8 760 aa13.27□□□□□ -0.29
SURF1-204ENST00000495952 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
SURF1-204ENST00000495952 ST20-MTHFSA0A0A6YYL1 179 aa13.26□□□□□ -0.29
SURF1-204ENST00000495952 KDM5AP29375 1690 aaKnown RBP13.26□□□□□ -0.29
SURF1-204ENST00000495952 ERCC6L2Q5T890 1561 aa13.26□□□□□ -0.29
SURF1-204ENST00000495952 DCAF11Q8TEB1 546 aa13.26□□□□□ -0.29
SURF1-204ENST00000495952 CLTCL1P53675 1640 aa13.25□□□□□ -0.29
SURF1-204ENST00000495952 MYO3AQ8NEV4 1616 aa13.25□□□□□ -0.29
SURF1-204ENST00000495952 SCAPERQ9BY12 1400 aa13.25□□□□□ -0.29
SURF1-204ENST00000495952 KIF1BO60333 1816 aa13.25□□□□□ -0.29
SURF1-204ENST00000495952 PTPRTO14522 1441 aa13.23□□□□□ -0.29
SURF1-204ENST00000495952 MSH5O43196 834 aa13.22□□□□□ -0.29
SURF1-204ENST00000495952 ATP7AQ04656 1500 aa13.22□□□□□ -0.29
SURF1-204ENST00000495952 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.29
SURF1-204ENST00000495952 ERICH6Q7L0X2 663 aa13.21□□□□□ -0.29
SURF1-204ENST00000495952 MYOM2P54296 1465 aa13.21□□□□□ -0.3
SURF1-204ENST00000495952 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
SURF1-204ENST00000495952 MAP3K4Q9Y6R4 1608 aa13.2□□□□□ -0.3
SURF1-204ENST00000495952 SCAF11Q99590 1463 aaKnown RBP13.19□□□□□ -0.3
SURF1-204ENST00000495952 PER1O15534 1290 aaPredicted RBP13.19□□□□□ -0.3
SURF1-204ENST00000495952 TESK2Q96S53 571 aa13.19□□□□□ -0.3
SURF1-204ENST00000495952 POLR3GLQ9BT43 218 aa13.19□□□□□ -0.3
SURF1-204ENST00000495952 MROH1Q8NDA8 1641 aa13.19□□□□□ -0.3
SURF1-204ENST00000495952 NPC1L1Q9UHC9 1359 aa13.19□□□□□ -0.3
SURF1-204ENST00000495952 CCDC136Q96JN2 1154 aa13.18□□□□□ -0.3
SURF1-204ENST00000495952 DISP3Q9P2K9 1392 aa13.18□□□□□ -0.3
SURF1-204ENST00000495952 ZC3H13Q5T200 1668 aaKnown RBP13.18□□□□□ -0.3
SURF1-204ENST00000495952 RRP1P56182 461 aaKnown RBP13.17□□□□□ -0.3
SURF1-204ENST00000495952 TMF1P82094 1093 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 EFCAB2Q5VUJ9 269 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 KDM2AQ9Y2K7 1162 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 ABCA6Q8N139 1617 aa13.17□□□□□ -0.3
SURF1-204ENST00000495952 PIK3C2GO75747 1445 aa13.16□□□□□ -0.3
SURF1-204ENST00000495952 EFCAB6Q5THR3 1501 aa13.16□□□□□ -0.3
SURF1-204ENST00000495952 SETBP1Q9Y6X0 1596 aa13.15□□□□□ -0.3
SURF1-204ENST00000495952 TRAPPC8Q9Y2L5 1435 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms