RNA–Protein interactions for RNA: ENST00000495802.5

SKAP2-208, Transcript of src kinase associated phosphoprotein 2, humanhuman

TSL 4

Gene SKAP2, Length 554 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP2-208ENST00000495802 TSR1Q2NL82 804 aaKnown RBP10.42□□□□□ -0.74
SKAP2-208ENST00000495802 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
SKAP2-208ENST00000495802 NPDC1Q9NQX5 325 aaPredicted RBP10.41□□□□□ -0.74
SKAP2-208ENST00000495802 TRIM66O15016 1216 aa10.4□□□□□ -0.74
SKAP2-208ENST00000495802 CCDC102AQ96A19 550 aa10.4□□□□□ -0.74
SKAP2-208ENST00000495802 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
SKAP2-208ENST00000495802 IRF6O14896 467 aa10.39□□□□□ -0.75
SKAP2-208ENST00000495802 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
SKAP2-208ENST00000495802 ADAM33Q9BZ11 813 aa10.38□□□□□ -0.75
SKAP2-208ENST00000495802 C6orf132Q5T0Z8 1188 aa10.37□□□□□ -0.75
SKAP2-208ENST00000495802 PDE4DQ08499 809 aa10.36□□□□□ -0.75
SKAP2-208ENST00000495802 TMEM132AQ24JP5 1023 aa10.36□□□□□ -0.75
SKAP2-208ENST00000495802 PPP4R3BQ5MIZ7 849 aa10.36□□□□□ -0.75
SKAP2-208ENST00000495802 PSDA5PKW4 1024 aaPredicted RBP10.35□□□□□ -0.75
SKAP2-208ENST00000495802 CERKQ8TCT0 537 aa10.34□□□□□ -0.75
SKAP2-208ENST00000495802 GPBP1L1Q9HC44 474 aaPredicted RBP10.34□□□□□ -0.75
SKAP2-208ENST00000495802 AMHR2Q16671 573 aa10.31□□□□□ -0.76
SKAP2-208ENST00000495802 KDM4CQ9H3R0 1056 aa10.3□□□□□ -0.76
SKAP2-208ENST00000495802 BCL2L12Q9HB09 334 aa10.3□□□□□ -0.76
SKAP2-208ENST00000495802 PADI6Q6TGC4 694 aa10.29□□□□□ -0.76
SKAP2-208ENST00000495802 RBM27Q9P2N5 1060 aaKnown RBP10.29□□□□□ -0.76
SKAP2-208ENST00000495802 PARP9Q8IXQ6 854 aa10.27□□□□□ -0.77
SKAP2-208ENST00000495802 COL9A1P20849 921 aa10.26□□□□□ -0.77
SKAP2-208ENST00000495802 PTPREP23469 700 aa10.26□□□□□ -0.77
SKAP2-208ENST00000495802 PRSS12P56730 875 aa10.26□□□□□ -0.77
SKAP2-208ENST00000495802 TTC13Q8NBP0 860 aa10.26□□□□□ -0.77
SKAP2-208ENST00000495802 PPP1R3GB7ZBB8 358 aa10.25□□□□□ -0.77
SKAP2-208ENST00000495802 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
SKAP2-208ENST00000495802 CDCA7LQ96GN5 454 aa10.25□□□□□ -0.77
SKAP2-208ENST00000495802 TTLL12Q14166 644 aaPredicted RBP10.24□□□□□ -0.77
SKAP2-208ENST00000495802 ADGRG1Q9Y653 693 aa10.24□□□□□ -0.77
SKAP2-208ENST00000495802 ST18O60284 1047 aa10.23□□□□□ -0.77
SKAP2-208ENST00000495802 OATP04181 439 aa10.22□□□□□ -0.77
SKAP2-208ENST00000495802 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
SKAP2-208ENST00000495802 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
SKAP2-208ENST00000495802 PXYLP1Q8TE99 480 aa10.21□□□□□ -0.77
SKAP2-208ENST00000495802 KCNK17Q96T54 332 aa10.21□□□□□ -0.77
SKAP2-208ENST00000495802 ERBB3P21860 1342 aa10.21□□□□□ -0.78
SKAP2-208ENST00000495802 VARS2Q5ST30 1063 aaKnown RBP10.2□□□□□ -0.78
SKAP2-208ENST00000495802 GIGYF2Q6Y7W6 1299 aaKnown RBP10.2□□□□□ -0.78
SKAP2-208ENST00000495802 IL27Q8NEV9 243 aa10.2□□□□□ -0.78
SKAP2-208ENST00000495802 DAXXQ9UER7 740 aaPredicted RBP10.2□□□□□ -0.78
SKAP2-208ENST00000495802 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
SKAP2-208ENST00000495802 CLCN1P35523 988 aa10.19□□□□□ -0.78
SKAP2-208ENST00000495802 EMP3P54852 163 aa10.19□□□□□ -0.78
SKAP2-208ENST00000495802 MDM2Q00987 491 aaPredicted RBP10.19□□□□□ -0.78
SKAP2-208ENST00000495802 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
SKAP2-208ENST00000495802 REPIN1Q9BWE0 567 aaKnown RBP10.19□□□□□ -0.78
SKAP2-208ENST00000495802 FAM117AQ9C073 453 aa10.19□□□□□ -0.78
SKAP2-208ENST00000495802 TSKSQ9UJT2 592 aa10.19□□□□□ -0.78
SKAP2-208ENST00000495802 TMUB1Q9BVT8 246 aa10.18□□□□□ -0.78
SKAP2-208ENST00000495802 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
SKAP2-208ENST00000495802 RBM46Q8TBY0 533 aaKnown RBP10.17□□□□□ -0.78
SKAP2-208ENST00000495802 NLRP7Q8WX94 980 aa10.17□□□□□ -0.78
SKAP2-208ENST00000495802 MARVELD3Q96A59 401 aa10.17□□□□□ -0.78
SKAP2-208ENST00000495802 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
SKAP2-208ENST00000495802 TRIM6-TRIM34B2RNG4 842 aa10.16□□□□□ -0.78
SKAP2-208ENST00000495802 DDRGK1Q96HY6 314 aa10.16□□□□□ -0.78
SKAP2-208ENST00000495802 PSEN2P49810 448 aa10.15□□□□□ -0.78
SKAP2-208ENST00000495802 PROX2Q3B8N5 592 aa10.15□□□□□ -0.78
SKAP2-208ENST00000495802 PLEKHG3A1L390 1219 aa10.14□□□□□ -0.79
SKAP2-208ENST00000495802 NBPF26B4DH59 902 aa10.14□□□□□ -0.79
SKAP2-208ENST00000495802 MS4A1P11836 297 aa10.14□□□□□ -0.79
SKAP2-208ENST00000495802 C3orf80F5H4A9 247 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 ARHGAP33O14559 1287 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 POTEEQ6S8J3 1075 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 PACS2Q86VP3 889 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 FAM163AQ96GL9 167 aaPredicted RBP10.13□□□□□ -0.79
SKAP2-208ENST00000495802 EYA1Q99502 592 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 ZBED2Q9BTP6 218 aa10.13□□□□□ -0.79
SKAP2-208ENST00000495802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.12□□□□□ -0.79
SKAP2-208ENST00000495802 FAM205CA6NFA0 338 aa10.12□□□□□ -0.79
SKAP2-208ENST00000495802 POTEMA6NI47 508 aa10.12□□□□□ -0.79
SKAP2-208ENST00000495802 ONECUT3O60422 494 aaPredicted RBP10.12□□□□□ -0.79
SKAP2-208ENST00000495802 NUDT18Q6ZVK8 323 aa10.12□□□□□ -0.79
SKAP2-208ENST00000495802 PNMA3Q9UL41 463 aa10.12□□□□□ -0.79
SKAP2-208ENST00000495802 RCCD1A6NED2 376 aa10.11□□□□□ -0.79
SKAP2-208ENST00000495802 TATDN2Q93075 761 aa10.11□□□□□ -0.79
SKAP2-208ENST00000495802 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
SKAP2-208ENST00000495802 AXIN2Q9Y2T1 843 aa10.11□□□□□ -0.79
SKAP2-208ENST00000495802 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
SKAP2-208ENST00000495802 PBX2P40425 430 aa10.1□□□□□ -0.79
SKAP2-208ENST00000495802 DMRTA1Q5VZB9 504 aa10.09□□□□□ -0.79
SKAP2-208ENST00000495802 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
SKAP2-208ENST00000495802 DNAJB2P25686 324 aa10.08□□□□□ -0.8
SKAP2-208ENST00000495802 SLC4A5Q9BY07 1137 aa10.08□□□□□ -0.8
SKAP2-208ENST00000495802 KIAA1468Q9P260 1216 aa10.08□□□□□ -0.8
SKAP2-208ENST00000495802 SMAPO00193 183 aa10.07□□□□□ -0.8
SKAP2-208ENST00000495802 LCE2DQ5TA82 110 aaPredicted RBP10.07□□□□□ -0.8
SKAP2-208ENST00000495802 HS3ST6Q96QI5 342 aa10.07□□□□□ -0.8
SKAP2-208ENST00000495802 RABGEF1Q9UJ41 708 aa10.06□□□□□ -0.8
SKAP2-208ENST00000495802 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
SKAP2-208ENST00000495802 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
SKAP2-208ENST00000495802 POTEGQ6S5H5 508 aa10.05□□□□□ -0.8
SKAP2-208ENST00000495802 BEGAINQ9BUH8 593 aa10.05□□□□□ -0.8
SKAP2-208ENST00000495802 TMEM134Q9H6X4 195 aa10.05□□□□□ -0.8
SKAP2-208ENST00000495802 PCDH10Q9P2E7 1040 aa10.04□□□□□ -0.8
SKAP2-208ENST00000495802 VPS9D1Q9Y2B5 631 aa10.03□□□□□ -0.8
SKAP2-208ENST00000495802 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
SKAP2-208ENST00000495802 SEPT9Q9UHD8 586 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms