RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 IQGAP3Q86VI3 1631 aa21.11■□□□□ 0.97
CALD1-222ENST00000495522 CCDC144AA2RUR9 1427 aa21.1■□□□□ 0.97
CALD1-222ENST00000495522 DCAF11Q8TEB1 546 aa21.1■□□□□ 0.97
CALD1-222ENST00000495522 DHX29Q7Z478 1369 aaKnown RBP21.1■□□□□ 0.97
CALD1-222ENST00000495522 KDM2AQ9Y2K7 1162 aa21.09■□□□□ 0.97
CALD1-222ENST00000495522 EFCAB2Q5VUJ9 269 aa21.09■□□□□ 0.97
CALD1-222ENST00000495522 ROCK2O75116 1388 aaKnown RBP21.09■□□□□ 0.97
CALD1-222ENST00000495522 ERBINQ96RT1 1412 aa21.07■□□□□ 0.96
CALD1-222ENST00000495522 ABCC1P33527 1531 aa21.07■□□□□ 0.96
CALD1-222ENST00000495522 MAGI2Q86UL8 1455 aa21.06■□□□□ 0.96
CALD1-222ENST00000495522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.964e-7■■■■□ 20
CALD1-222ENST00000495522 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
CALD1-222ENST00000495522 PLA2R1Q13018 1463 aa21.05■□□□□ 0.96
CALD1-222ENST00000495522 FAM9BQ8IZU0 186 aa21.04■□□□□ 0.96
CALD1-222ENST00000495522 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
CALD1-222ENST00000495522 ARAP3Q8WWN8 1544 aa21.02■□□□□ 0.96
CALD1-222ENST00000495522 TRPM1Q7Z4N2 1603 aa21.02■□□□□ 0.96
CALD1-222ENST00000495522 ST20-MTHFSA0A0A6YYL1 179 aa21■□□□□ 0.95
CALD1-222ENST00000495522 TSHZ2Q9NRE2 1034 aa21■□□□□ 0.95
CALD1-222ENST00000495522 ATP10AO60312 1499 aa21■□□□□ 0.95
CALD1-222ENST00000495522 ZBED9Q6R2W3 1325 aa21■□□□□ 0.95
CALD1-222ENST00000495522 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
CALD1-222ENST00000495522 A2MP01023 1474 aa20.98■□□□□ 0.95
CALD1-222ENST00000495522 RGL3Q3MIN7 710 aa20.96■□□□□ 0.95
CALD1-222ENST00000495522 RTEL1-TNFRSF6BF6WH68 1400 aa20.95■□□□□ 0.94
CALD1-222ENST00000495522 LAMC1P11047 1609 aa20.95■□□□□ 0.94
CALD1-222ENST00000495522 GPRASP1Q5JY77 1395 aa20.95■□□□□ 0.94
CALD1-222ENST00000495522 SPAG9O60271 1321 aaKnown RBP20.94■□□□□ 0.94
CALD1-222ENST00000495522 WDR7Q9Y4E6 1490 aa20.94■□□□□ 0.94
CALD1-222ENST00000495522 EIF2AK4Q9P2K8 1649 aaKnown RBP20.94■□□□□ 0.94
CALD1-222ENST00000495522 E9PCH4 1651 aa20.93■□□□□ 0.94
CALD1-222ENST00000495522 ZFYVE16Q7Z3T8 1539 aa20.93■□□□□ 0.94
CALD1-222ENST00000495522 RIMBP3CA6NJZ7 1639 aa20.91■□□□□ 0.94
CALD1-222ENST00000495522 RIMBP3BA6NNM3 1639 aa20.91■□□□□ 0.94
CALD1-222ENST00000495522 RIMBP3Q9UFD9 1639 aa20.91■□□□□ 0.94
CALD1-222ENST00000495522 KTN1Q86UP2 1357 aaKnown RBP20.9■□□□□ 0.94
CALD1-222ENST00000495522 PRDM15P57071 1507 aaPredicted RBP20.9■□□□□ 0.94
CALD1-222ENST00000495522 CNGB1Q14028 1251 aaPredicted RBP20.89■□□□□ 0.93
CALD1-222ENST00000495522 NBPF1Q3BBV0 1214 aa20.89■□□□□ 0.93
CALD1-222ENST00000495522 ABCA9Q8IUA7 1624 aa20.89■□□□□ 0.93
CALD1-222ENST00000495522 ERICH6BQ5W0A0 696 aa20.88■□□□□ 0.93
CALD1-222ENST00000495522 AFAP1Q8N556 730 aa20.87■□□□□ 0.93
CALD1-222ENST00000495522 FANCAO15360 1455 aa20.86■□□□□ 0.93
CALD1-222ENST00000495522 DEPDC5O75140 1603 aa20.85■□□□□ 0.93
CALD1-222ENST00000495522 RALBP1Q15311 655 aa20.85■□□□□ 0.93
CALD1-222ENST00000495522 INO80Q9ULG1 1556 aaPredicted RBP20.84■□□□□ 0.93
CALD1-222ENST00000495522 ATP7AQ04656 1500 aa20.84■□□□□ 0.93
CALD1-222ENST00000495522 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
CALD1-222ENST00000495522 TRPM2O94759 1503 aa20.83■□□□□ 0.93
CALD1-222ENST00000495522 TMC1Q8TDI8 760 aa20.83■□□□□ 0.93
CALD1-222ENST00000495522 IRX6P78412 446 aaPredicted RBP20.83■□□□□ 0.92
CALD1-222ENST00000495522 CYB5RLQ6IPT4 315 aa20.83■□□□□ 0.92
CALD1-222ENST00000495522 RNF17Q9BXT8 1623 aaKnown RBP20.83■□□□□ 0.92
CALD1-222ENST00000495522 MYBBP1AQ9BQG0 1328 aaKnown RBP20.83■□□□□ 0.92
CALD1-222ENST00000495522 PNISRQ8TF01 805 aaKnown RBP20.82■□□□□ 0.92
CALD1-222ENST00000495522 BRD4O60885 1362 aaPredicted RBP20.82■□□□□ 0.92
CALD1-222ENST00000495522 TET3O43151 1660 aa20.8■□□□□ 0.92
CALD1-222ENST00000495522 SPHKAPQ2M3C7 1700 aa20.8■□□□□ 0.92
CALD1-222ENST00000495522 PTPRTO14522 1441 aa20.8■□□□□ 0.92
CALD1-222ENST00000495522 SMG6Q86US8 1419 aaKnown RBP20.8■□□□□ 0.92
CALD1-222ENST00000495522 NPM1P06748 294 aaKnown RBP eCLIP20.79■□□□□ 0.92
CALD1-222ENST00000495522 TESK2Q96S53 571 aa20.79■□□□□ 0.92
CALD1-222ENST00000495522 ADGRL1O94910 1474 aa20.79■□□□□ 0.92
CALD1-222ENST00000495522 CEP152O94986 1710 aa20.79■□□□□ 0.92
CALD1-222ENST00000495522 KANK1Q14678 1352 aa20.78■□□□□ 0.92
CALD1-222ENST00000495522 ASXL2Q76L83 1435 aa20.78■□□□□ 0.92
CALD1-222ENST00000495522 MADDQ8WXG6 1647 aa20.77■□□□□ 0.92
CALD1-222ENST00000495522 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.92
CALD1-222ENST00000495522 SCAPERQ9BY12 1400 aa20.77■□□□□ 0.92
CALD1-222ENST00000495522 LRPPRCP42704 1394 aaKnown RBP20.76■□□□□ 0.91
CALD1-222ENST00000495522 DISP3Q9P2K9 1392 aa20.76■□□□□ 0.91
CALD1-222ENST00000495522 PARD3Q8TEW0 1356 aa20.75■□□□□ 0.91
CALD1-222ENST00000495522 CLTCL1P53675 1640 aa20.75■□□□□ 0.91
CALD1-222ENST00000495522 STAC3Q96MF2 364 aa20.75■□□□□ 0.91
CALD1-222ENST00000495522 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
CALD1-222ENST00000495522 TMF1P82094 1093 aa20.74■□□□□ 0.91
CALD1-222ENST00000495522 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
CALD1-222ENST00000495522 NUDCQ9Y266 331 aa20.73■□□□□ 0.91
CALD1-222ENST00000495522 WASHC2CQ9Y4E1 1318 aa20.73■□□□□ 0.91
CALD1-222ENST00000495522 PER1O15534 1290 aaPredicted RBP20.73■□□□□ 0.91
CALD1-222ENST00000495522 NLRP13Q86W25 1043 aa20.72■□□□□ 0.91
CALD1-222ENST00000495522 MYT1LQ9UL68 1186 aa20.72■□□□□ 0.91
CALD1-222ENST00000495522 KIF3BO15066 747 aa20.71■□□□□ 0.91
CALD1-222ENST00000495522 IQGAP1P46940 1657 aa20.71■□□□□ 0.91
CALD1-222ENST00000495522 NEURL4Q96JN8 1562 aa20.7■□□□□ 0.9
CALD1-222ENST00000495522 MROH1Q8NDA8 1641 aa20.69■□□□□ 0.9
CALD1-222ENST00000495522 PANK3Q9H999 370 aa20.66■□□□□ 0.9
CALD1-222ENST00000495522 KIDINS220Q9ULH0 1771 aa20.66■□□□□ 0.9
CALD1-222ENST00000495522 ZNF518AQ6AHZ1 1483 aa20.66■□□□□ 0.9
CALD1-222ENST00000495522 SCAF11Q99590 1463 aaKnown RBP20.65■□□□□ 0.9
CALD1-222ENST00000495522 RBM19Q9Y4C8 960 aaKnown RBP20.65■□□□□ 0.9
CALD1-222ENST00000495522 RNF123Q5XPI4 1314 aa20.64■□□□□ 0.89
CALD1-222ENST00000495522 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
CALD1-222ENST00000495522 EFCAB6Q5THR3 1501 aa20.63■□□□□ 0.89
CALD1-222ENST00000495522 CFAP74Q9C0B2 1584 aa20.63■□□□□ 0.89
CALD1-222ENST00000495522 CC2D1BQ5T0F9 858 aaKnown RBP20.61■□□□□ 0.89
CALD1-222ENST00000495522 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
CALD1-222ENST00000495522 LMTK2Q8IWU2 1503 aa20.6■□□□□ 0.89
CALD1-222ENST00000495522 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
CALD1-222ENST00000495522 MYOM2P54296 1465 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms