RNA–Protein interactions for RNA: ENST00000495445.5

CTNS-207, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 2

Gene CTNS, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-207ENST00000495445 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
CTNS-207ENST00000495445 DUOX2Q9NRD8 1548 aa26.78■■□□□ 1.88
CTNS-207ENST00000495445 RNF17Q9BXT8 1623 aaKnown RBP26.76■■□□□ 1.87
CTNS-207ENST00000495445 KIF15Q9NS87 1388 aa26.76■■□□□ 1.87
CTNS-207ENST00000495445 RRP7BPQ9NSQ0 103 aa26.76■■□□□ 1.87
CTNS-207ENST00000495445 EIF2AK4Q9P2K8 1649 aaKnown RBP26.76■■□□□ 1.87
CTNS-207ENST00000495445 KDM5DQ9BY66 1539 aa26.75■■□□□ 1.87
CTNS-207ENST00000495445 CHIC2Q9UKJ5 165 aa26.72■■□□□ 1.87
CTNS-207ENST00000495445 NCOA1Q15788 1441 aa26.72■■□□□ 1.87
CTNS-207ENST00000495445 STRCQ7RTU9 1775 aa26.71■■□□□ 1.87
CTNS-207ENST00000495445 FAM50AQ14320 339 aaKnown RBP26.71■■□□□ 1.87
CTNS-207ENST00000495445 FBXO31Q5XUX0 539 aaPredicted RBP26.71■■□□□ 1.87
CTNS-207ENST00000495445 PZPP20742 1482 aa26.7■■□□□ 1.87
CTNS-207ENST00000495445 ERBINQ96RT1 1412 aa26.7■■□□□ 1.86
CTNS-207ENST00000495445 ANKRD30AQ9BXX3 1397 aa26.7■■□□□ 1.86
CTNS-207ENST00000495445 DMRT2Q9Y5R5 561 aa26.69■■□□□ 1.86
CTNS-207ENST00000495445 MROH1Q8NDA8 1641 aa26.68■■□□□ 1.86
CTNS-207ENST00000495445 ADGRL2O95490 1459 aa26.67■■□□□ 1.86
CTNS-207ENST00000495445 ABCC3O15438 1527 aa26.66■■□□□ 1.86
CTNS-207ENST00000495445 PPARGC1BQ86YN6 1023 aaKnown RBP26.64■■□□□ 1.86
CTNS-207ENST00000495445 TNRQ92752 1358 aa26.63■■□□□ 1.85
CTNS-207ENST00000495445 MYO3AQ8NEV4 1616 aa26.63■■□□□ 1.85
CTNS-207ENST00000495445 ZNF142P52746 1687 aaPredicted RBP26.63■■□□□ 1.85
CTNS-207ENST00000495445 ILDR1Q86SU0 546 aaPredicted RBP26.62■■□□□ 1.85
CTNS-207ENST00000495445 ZC3H13Q5T200 1668 aaKnown RBP26.62■■□□□ 1.85
CTNS-207ENST00000495445 PTPRTO14522 1441 aa26.61■■□□□ 1.85
CTNS-207ENST00000495445 CEP170BQ9Y4F5 1589 aaPredicted RBP26.61■■□□□ 1.85
CTNS-207ENST00000495445 A2ML1A8K2U0 1454 aa26.61■■□□□ 1.85
CTNS-207ENST00000495445 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.6■■□□□ 1.85
CTNS-207ENST00000495445 CAMSAP1Q5T5Y3 1602 aa26.6■■□□□ 1.85
CTNS-207ENST00000495445 PRDM15P57071 1507 aaPredicted RBP26.59■■□□□ 1.85
CTNS-207ENST00000495445 DEPDC5O75140 1603 aa26.57■■□□□ 1.84
CTNS-207ENST00000495445 PLA2R1Q13018 1463 aa26.56■■□□□ 1.84
CTNS-207ENST00000495445 ARHGAP31Q2M1Z3 1444 aa26.56■■□□□ 1.84
CTNS-207ENST00000495445 PKD2Q13563 968 aa26.54■■□□□ 1.84
CTNS-207ENST00000495445 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.54■■□□□ 1.84
CTNS-207ENST00000495445 NCKAP5LQ9HCH0 1330 aa26.54■■□□□ 1.84
CTNS-207ENST00000495445 SPATA31D1Q6ZQQ2 1576 aa26.54■■□□□ 1.84
CTNS-207ENST00000495445 ROCK1Q13464 1354 aa26.53■■□□□ 1.84
CTNS-207ENST00000495445 NLRP1Q9C000 1473 aa26.53■■□□□ 1.84
CTNS-207ENST00000495445 CEP152O94986 1710 aa26.53■■□□□ 1.84
CTNS-207ENST00000495445 VWDEQ8N2E2 1590 aa26.52■■□□□ 1.84
CTNS-207ENST00000495445 ANKRD50Q9ULJ7 1429 aa26.52■■□□□ 1.84
CTNS-207ENST00000495445 ERVK-7P63135 1459 aa26.51■■□□□ 1.83
CTNS-207ENST00000495445 KANK1Q14678 1352 aa26.51■■□□□ 1.83
CTNS-207ENST00000495445 LMTK2Q8IWU2 1503 aa26.49■■□□□ 1.83
CTNS-207ENST00000495445 THEMISQ8N1K5 641 aaPredicted RBP26.48■■□□□ 1.83
CTNS-207ENST00000495445 CERKQ8TCT0 537 aa26.48■■□□□ 1.83
CTNS-207ENST00000495445 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
CTNS-207ENST00000495445 RRBP1Q9P2E9 1410 aaKnown RBP26.47■■□□□ 1.83
CTNS-207ENST00000495445 CFAP65Q6ZU64 1925 aaKnown RBP26.44■■□□□ 1.82
CTNS-207ENST00000495445 UGGT1Q9NYU2 1555 aa26.43■■□□□ 1.82
CTNS-207ENST00000495445 ITGAEP38570 1179 aa26.4■■□□□ 1.82
CTNS-207ENST00000495445 ANKLE2Q86XL3 938 aa26.39■■□□□ 1.82
CTNS-207ENST00000495445 LTBP4Q8N2S1 1624 aa26.38■■□□□ 1.81
CTNS-207ENST00000495445 NOS1P29475 1434 aa26.35■■□□□ 1.81
CTNS-207ENST00000495445 EFCAB6Q5THR3 1501 aa26.34■■□□□ 1.81
CTNS-207ENST00000495445 NEURL4Q96JN8 1562 aa26.34■■□□□ 1.81
CTNS-207ENST00000495445 UNC13BO14795 1591 aa26.33■■□□□ 1.81
CTNS-207ENST00000495445 MED14O60244 1454 aa26.33■■□□□ 1.81
CTNS-207ENST00000495445 IDI1Q13907 227 aa26.32■■□□□ 1.8
CTNS-207ENST00000495445 UBR1Q8IWV7 1749 aa26.31■■□□□ 1.8
CTNS-207ENST00000495445 RPRD2Q5VT52 1461 aaKnown RBP26.31■■□□□ 1.8
CTNS-207ENST00000495445 POLR1AO95602 1720 aaPredicted RBP26.31■■□□□ 1.8
CTNS-207ENST00000495445 ZNF335Q9H4Z2 1342 aaPredicted RBP26.3■■□□□ 1.8
CTNS-207ENST00000495445 SLC52A1Q9NWF4 448 aa26.28■■□□□ 1.8
CTNS-207ENST00000495445 SYNMO15061 1565 aa26.28■■□□□ 1.8
CTNS-207ENST00000495445 TET3O43151 1660 aa26.28■■□□□ 1.8
CTNS-207ENST00000495445 ARHGAP23Q9P227 1491 aa26.27■■□□□ 1.8
CTNS-207ENST00000495445 SLIT1O75093 1534 aa26.26■■□□□ 1.79
CTNS-207ENST00000495445 NPHP4O75161 1426 aaPredicted RBP26.25■■□□□ 1.79
CTNS-207ENST00000495445 LTKP29376 864 aa26.25■■□□□ 1.79
CTNS-207ENST00000495445 PIK3C2BO00750 1634 aa26.25■■□□□ 1.79
CTNS-207ENST00000495445 NUP155O75694 1391 aa26.24■■□□□ 1.79
CTNS-207ENST00000495445 IQGAP3Q86VI3 1631 aa26.24■■□□□ 1.79
CTNS-207ENST00000495445 IQSEC2Q5JU85 1478 aa26.23■■□□□ 1.79
CTNS-207ENST00000495445 KDM5AP29375 1690 aaKnown RBP26.23■■□□□ 1.79
CTNS-207ENST00000495445 NAIPQ13075 1403 aa26.22■■□□□ 1.79
CTNS-207ENST00000495445 GCC2Q8IWJ2 1684 aa26.22■■□□□ 1.79
CTNS-207ENST00000495445 TXNDC2Q86VQ3 553 aa26.21■■□□□ 1.79
CTNS-207ENST00000495445 TMEM2Q9UHN6 1383 aa26.2■■□□□ 1.79
CTNS-207ENST00000495445 SCAF11Q99590 1463 aaKnown RBP26.19■■□□□ 1.78
CTNS-207ENST00000495445 STAG3Q9UJ98 1225 aa26.19■■□□□ 1.78
CTNS-207ENST00000495445 E9PCH4 1651 aa26.18■■□□□ 1.78
CTNS-207ENST00000495445 EID1Q9Y6B2 187 aa26.17■■□□□ 1.78
CTNS-207ENST00000495445 IQGAP1P46940 1657 aa26.17■■□□□ 1.78
CTNS-207ENST00000495445 HFM1A2PYH4 1435 aa26.14■■□□□ 1.78
CTNS-207ENST00000495445 ADGRB3O60242 1522 aa26.13■■□□□ 1.77
CTNS-207ENST00000495445 CPS1P31327 1500 aa26.1■■□□□ 1.77
CTNS-207ENST00000495445 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
CTNS-207ENST00000495445 ZFYVE9O95405 1425 aa26.05■■□□□ 1.76
CTNS-207ENST00000495445 STRCP1A6NGW2 1772 aa26.02■■□□□ 1.76
CTNS-207ENST00000495445 HDGFP51858 240 aaKnown RBP26.02■■□□□ 1.76
CTNS-207ENST00000495445 MYO5BQ9ULV0 1848 aa26.01■■□□□ 1.75
CTNS-207ENST00000495445 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
CTNS-207ENST00000495445 UBAP1LF5GYI3 381 aa25.99■■□□□ 1.75
CTNS-207ENST00000495445 TRIM52Q96A61 297 aa25.98■■□□□ 1.75
CTNS-207ENST00000495445 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
CTNS-207ENST00000495445 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.97■■□□□ 1.75
CTNS-207ENST00000495445 LRRC7Q96NW7 1537 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms