RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 MIA2Q96PC5 1412 aa28.59■■■□□ 2.17
YIPF4-204ENST00000495355 KDM5DQ9BY66 1539 aa28.59■■■□□ 2.17
YIPF4-204ENST00000495355 FAM135AQ9P2D6 1515 aa28.57■■■□□ 2.16
YIPF4-204ENST00000495355 LTBP4Q8N2S1 1624 aa28.56■■■□□ 2.16
YIPF4-204ENST00000495355 RNF17Q9BXT8 1623 aaKnown RBP28.54■■■□□ 2.16
YIPF4-204ENST00000495355 PZPP20742 1482 aa28.53■■■□□ 2.16
YIPF4-204ENST00000495355 PLA2R1Q13018 1463 aa28.53■■■□□ 2.16
YIPF4-204ENST00000495355 TSPY4P0CV99 314 aa28.52■■■□□ 2.16
YIPF4-204ENST00000495355 TSPY10P0CW01 314 aa28.52■■■□□ 2.16
YIPF4-204ENST00000495355 TCOF1Q13428 1488 aaKnown RBP28.52■■■□□ 2.16
YIPF4-204ENST00000495355 DNMT1P26358 1616 aaKnown RBP28.51■■■□□ 2.15
YIPF4-204ENST00000495355 NCKAP5LQ9HCH0 1330 aa28.5■■■□□ 2.15
YIPF4-204ENST00000495355 FBXO31Q5XUX0 539 aaPredicted RBP28.5■■■□□ 2.15
YIPF4-204ENST00000495355 A2ML1A8K2U0 1454 aa28.5■■■□□ 2.15
YIPF4-204ENST00000495355 MROH1Q8NDA8 1641 aa28.5■■■□□ 2.15
YIPF4-204ENST00000495355 EIF2AK4Q9P2K8 1649 aaKnown RBP28.47■■■□□ 2.15
YIPF4-204ENST00000495355 CROCC2H7BZ55 1655 aa28.47■■■□□ 2.15
YIPF4-204ENST00000495355 PTPN23Q9H3S7 1636 aa28.46■■■□□ 2.15
YIPF4-204ENST00000495355 TNRQ92752 1358 aa28.45■■■□□ 2.14
YIPF4-204ENST00000495355 WASHC2CQ9Y4E1 1318 aa28.44■■■□□ 2.14
YIPF4-204ENST00000495355 ABCC3O15438 1527 aa28.44■■■□□ 2.14
YIPF4-204ENST00000495355 ABCC5O15440 1437 aa28.43■■■□□ 2.14
YIPF4-204ENST00000495355 ZC3H13Q5T200 1668 aaKnown RBP28.41■■■□□ 2.14
YIPF4-204ENST00000495355 SHANK2Q9UPX8 1470 aa28.4■■■□□ 2.14
YIPF4-204ENST00000495355 DUOX2Q9NRD8 1548 aa28.39■■■□□ 2.14
YIPF4-204ENST00000495355 PKD2Q13563 968 aa28.39■■■□□ 2.14
YIPF4-204ENST00000495355 FGD6Q6ZV73 1430 aa28.39■■■□□ 2.14
YIPF4-204ENST00000495355 NEURL4Q96JN8 1562 aa28.38■■■□□ 2.13
YIPF4-204ENST00000495355 CEP152O94986 1710 aa28.37■■■□□ 2.13
YIPF4-204ENST00000495355 ZNF335Q9H4Z2 1342 aaPredicted RBP28.37■■■□□ 2.13
YIPF4-204ENST00000495355 SPATA31D1Q6ZQQ2 1576 aa28.36■■■□□ 2.13
YIPF4-204ENST00000495355 DAPK1P53355 1430 aa28.35■■■□□ 2.13
YIPF4-204ENST00000495355 POLR1AO95602 1720 aaPredicted RBP28.35■■■□□ 2.13
YIPF4-204ENST00000495355 IQSEC2Q5JU85 1478 aa28.34■■■□□ 2.13
YIPF4-204ENST00000495355 APLP2Q06481 763 aa28.33■■■□□ 2.13
YIPF4-204ENST00000495355 KIF15Q9NS87 1388 aa28.33■■■□□ 2.13
YIPF4-204ENST00000495355 NLRP1Q9C000 1473 aa28.33■■■□□ 2.13
YIPF4-204ENST00000495355 PRDM15P57071 1507 aaPredicted RBP28.32■■■□□ 2.12
YIPF4-204ENST00000495355 ERVK-7P63135 1459 aa28.31■■■□□ 2.12
YIPF4-204ENST00000495355 UGGT1Q9NYU2 1555 aa28.29■■■□□ 2.12
YIPF4-204ENST00000495355 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
YIPF4-204ENST00000495355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.28■■■□□ 2.12
YIPF4-204ENST00000495355 DEPDC5O75140 1603 aa28.28■■■□□ 2.12
YIPF4-204ENST00000495355 RRP7BPQ9NSQ0 103 aa28.26■■■□□ 2.11
YIPF4-204ENST00000495355 CFAP65Q6ZU64 1925 aaKnown RBP28.22■■■□□ 2.11
YIPF4-204ENST00000495355 MED14O60244 1454 aa28.21■■■□□ 2.11
YIPF4-204ENST00000495355 ARHGAP31Q2M1Z3 1444 aa28.2■■■□□ 2.11
YIPF4-204ENST00000495355 UBR1Q8IWV7 1749 aa28.18■■■□□ 2.1
YIPF4-204ENST00000495355 THEMISQ8N1K5 641 aaPredicted RBP28.18■■■□□ 2.1
YIPF4-204ENST00000495355 CHIC2Q9UKJ5 165 aa28.18■■■□□ 2.1
YIPF4-204ENST00000495355 VWDEQ8N2E2 1590 aa28.18■■■□□ 2.1
YIPF4-204ENST00000495355 ADGRL2O95490 1459 aa28.17■■■□□ 2.1
YIPF4-204ENST00000495355 ANKRD30AQ9BXX3 1397 aa28.15■■■□□ 2.1
YIPF4-204ENST00000495355 ANKLE2Q86XL3 938 aa28.15■■■□□ 2.1
YIPF4-204ENST00000495355 NPHP4O75161 1426 aaPredicted RBP28.15■■■□□ 2.1
YIPF4-204ENST00000495355 LMTK2Q8IWU2 1503 aa28.13■■■□□ 2.09
YIPF4-204ENST00000495355 IQGAP1P46940 1657 aa28.13■■■□□ 2.09
YIPF4-204ENST00000495355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.11■■■□□ 2.099e-7■■■■□ 22.1
YIPF4-204ENST00000495355 CPS1P31327 1500 aa28.09■■■□□ 2.09
YIPF4-204ENST00000495355 ARHGAP23Q9P227 1491 aa28.08■■■□□ 2.09
YIPF4-204ENST00000495355 STRCP1A6NGW2 1772 aa28.08■■■□□ 2.09
YIPF4-204ENST00000495355 PIK3C2BO00750 1634 aa28.07■■■□□ 2.08
YIPF4-204ENST00000495355 FAM50AQ14320 339 aaKnown RBP28.06■■■□□ 2.08
YIPF4-204ENST00000495355 SLIT1O75093 1534 aa28.06■■■□□ 2.08
YIPF4-204ENST00000495355 UBAP1LF5GYI3 381 aa28.05■■■□□ 2.08
YIPF4-204ENST00000495355 SYNMO15061 1565 aa28.05■■■□□ 2.08
YIPF4-204ENST00000495355 EFCAB6Q5THR3 1501 aa28.04■■■□□ 2.08
YIPF4-204ENST00000495355 KANK1Q14678 1352 aa28.03■■■□□ 2.08
YIPF4-204ENST00000495355 SCAF11Q99590 1463 aaKnown RBP28.02■■■□□ 2.08
YIPF4-204ENST00000495355 ALKQ9UM73 1620 aa28.01■■■□□ 2.07
YIPF4-204ENST00000495355 LTKP29376 864 aa28.01■■■□□ 2.07
YIPF4-204ENST00000495355 NOS1P29475 1434 aa28■■■□□ 2.07
YIPF4-204ENST00000495355 ANKRD50Q9ULJ7 1429 aa28■■■□□ 2.07
YIPF4-204ENST00000495355 KDM5AP29375 1690 aaKnown RBP27.97■■■□□ 2.07
YIPF4-204ENST00000495355 LRRC7Q96NW7 1537 aa27.94■■■□□ 2.06
YIPF4-204ENST00000495355 IDI1Q13907 227 aa27.94■■■□□ 2.06
YIPF4-204ENST00000495355 TMEM2Q9UHN6 1383 aa27.93■■■□□ 2.06
YIPF4-204ENST00000495355 UNC13BO14795 1591 aa27.93■■■□□ 2.06
YIPF4-204ENST00000495355 DISP3Q9P2K9 1392 aa27.92■■■□□ 2.06
YIPF4-204ENST00000495355 TXNDC2Q86VQ3 553 aa27.91■■■□□ 2.06
YIPF4-204ENST00000495355 TET3O43151 1660 aa27.91■■■□□ 2.06
YIPF4-204ENST00000495355 ADGRB3O60242 1522 aa27.9■■■□□ 2.06
YIPF4-204ENST00000495355 RPRD2Q5VT52 1461 aaKnown RBP27.88■■■□□ 2.05
YIPF4-204ENST00000495355 ROCK1Q13464 1354 aa27.87■■■□□ 2.05
YIPF4-204ENST00000495355 ILDR2Q71H61 639 aa27.87■■■□□ 2.05
YIPF4-204ENST00000495355 PPARGC1BQ86YN6 1023 aaKnown RBP27.86■■■□□ 2.05
YIPF4-204ENST00000495355 GCC2Q8IWJ2 1684 aa27.86■■■□□ 2.05
YIPF4-204ENST00000495355 XIRP1Q702N8 1843 aaKnown RBP27.85■■■□□ 2.05
YIPF4-204ENST00000495355 PIP4K2BP78356 416 aa27.83■■■□□ 2.05
YIPF4-204ENST00000495355 E9PCH4 1651 aa27.82■■■□□ 2.04
YIPF4-204ENST00000495355 TOM1O60784 492 aa27.82■■■□□ 2.04
YIPF4-204ENST00000495355 MYO5BQ9ULV0 1848 aa27.82■■■□□ 2.04
YIPF4-204ENST00000495355 HSPA1LP34931 641 aa27.81■■■□□ 2.04
YIPF4-204ENST00000495355 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
YIPF4-204ENST00000495355 IQGAP3Q86VI3 1631 aa27.81■■■□□ 2.04
YIPF4-204ENST00000495355 STAG3Q9UJ98 1225 aa27.8■■■□□ 2.04
YIPF4-204ENST00000495355 SCAF1Q9H7N4 1312 aaKnown RBP27.78■■■□□ 2.04
YIPF4-204ENST00000495355 SLC52A1Q9NWF4 448 aa27.78■■■□□ 2.04
YIPF4-204ENST00000495355 TMEM131LA2VDJ0 1609 aa27.78■■■□□ 2.04
YIPF4-204ENST00000495355 ZFYVE9O95405 1425 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms