RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 NCKAP5LQ9HCH0 1330 aa7.15□□□□□ -1.26
RPGR-209ENST00000494707 SOWAHBA6NEL2 793 aa7.13□□□□□ -1.27
RPGR-209ENST00000494707 FBXW7Q969H0 707 aa7.13□□□□□ -1.27
RPGR-209ENST00000494707 ONECUT3O60422 494 aaPredicted RBP7.12□□□□□ -1.27
RPGR-209ENST00000494707 DDX27Q96GQ7 796 aaKnown RBP7.11□□□□□ -1.27
RPGR-209ENST00000494707 LARP6Q9BRS8 491 aaKnown RBP7.11□□□□□ -1.27
RPGR-209ENST00000494707 BCAMP50895 628 aa7.1□□□□□ -1.27
RPGR-209ENST00000494707 TYW1BQ6NUM6 668 aa7.09□□□□□ -1.27
RPGR-209ENST00000494707 ZFRQ96KR1 1074 aaKnown RBP7.09□□□□□ -1.27
RPGR-209ENST00000494707 PHF14O94880 888 aa7.08□□□□□ -1.28
RPGR-209ENST00000494707 PROX2Q3B8N5 592 aa7.08□□□□□ -1.28
RPGR-209ENST00000494707 CADPS2Q86UW7 1296 aa7.08□□□□□ -1.28
RPGR-209ENST00000494707 KIAA1468Q9P260 1216 aa7.07□□□□□ -1.28
RPGR-209ENST00000494707 PCDHGA10Q9Y5H3 936 aa7.07□□□□□ -1.28
RPGR-209ENST00000494707 TRAF7Q6Q0C0 670 aa7.06□□□□□ -1.28
RPGR-209ENST00000494707 BBXQ8WY36 941 aaPredicted RBP7.06□□□□□ -1.28
RPGR-209ENST00000494707 WBP1LQ9NX94 342 aa7.06□□□□□ -1.28
RPGR-209ENST00000494707 TSR3Q9UJK0 312 aaKnown RBP7.06□□□□□ -1.28
RPGR-209ENST00000494707 GFRA3O60609 400 aa7.05□□□□□ -1.28
RPGR-209ENST00000494707 MFSD10Q14728 455 aa7.05□□□□□ -1.28
RPGR-209ENST00000494707 FAM98CQ17RN3 349 aaKnown RBP7.05□□□□□ -1.28
RPGR-209ENST00000494707 LRCH3Q96II8 777 aa7.05□□□□□ -1.28
RPGR-209ENST00000494707 EPAS1Q99814 870 aa7.05□□□□□ -1.28
RPGR-209ENST00000494707 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.05□□□□□ -1.28
RPGR-209ENST00000494707 COL9A1P20849 921 aa7.04□□□□□ -1.28
RPGR-209ENST00000494707 TRIM6-TRIM34B2RNG4 842 aa7.02□□□□□ -1.29
RPGR-209ENST00000494707 EMILIN3Q9NT22 766 aa7.02□□□□□ -1.29
RPGR-209ENST00000494707 HPS5Q9UPZ3 1129 aa7.02□□□□□ -1.29
RPGR-209ENST00000494707 NRG2O14511 850 aaPredicted RBP7.01□□□□□ -1.29
RPGR-209ENST00000494707 C6orf132Q5T0Z8 1188 aa7.01□□□□□ -1.29
RPGR-209ENST00000494707 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.01□□□□□ -1.29
RPGR-209ENST00000494707 SEPT9Q9UHD8 586 aaPredicted RBP7.01□□□□□ -1.29
RPGR-209ENST00000494707 SPRYD3Q8NCJ5 442 aa7□□□□□ -1.29
RPGR-209ENST00000494707 PPP4CP60510 307 aa6.99□□□□□ -1.29
RPGR-209ENST00000494707 PACS2Q86VP3 889 aa6.99□□□□□ -1.29
RPGR-209ENST00000494707 CFAP44Q96MT7 982 aa6.99□□□□□ -1.29
RPGR-209ENST00000494707 V9GY48 417 aaPredicted RBP6.98□□□□□ -1.29
RPGR-209ENST00000494707 PAXIP1Q6ZW49 1069 aaPredicted RBP6.97□□□□□ -1.29
RPGR-209ENST00000494707 PRKD2Q9BZL6 878 aa6.97□□□□□ -1.29
RPGR-209ENST00000494707 DPYSL4O14531 572 aa6.96□□□□□ -1.3
RPGR-209ENST00000494707 NECTIN2Q92692 538 aa6.94□□□□□ -1.3
RPGR-209ENST00000494707 IL21Q9HBE4 155 aa6.94□□□□□ -1.3
RPGR-209ENST00000494707 HDGFP51858 240 aaKnown RBP6.93□□□□□ -1.3
RPGR-209ENST00000494707 CAMK2BQ13554 666 aa6.93□□□□□ -1.3
RPGR-209ENST00000494707 ZNF787Q6DD87 383 aa6.93□□□□□ -1.3
RPGR-209ENST00000494707 GGCXP38435 758 aa6.92□□□□□ -1.3
RPGR-209ENST00000494707 TJAP1Q5JTD0 557 aa6.92□□□□□ -1.3
RPGR-209ENST00000494707 RBM33Q96EV2 1170 aaKnown RBP6.92□□□□□ -1.3
RPGR-209ENST00000494707 LCE2BO14633 110 aa6.91□□□□□ -1.3
RPGR-209ENST00000494707 PPP1R18Q6NYC8 613 aa6.91□□□□□ -1.3
RPGR-209ENST00000494707 CERKQ8TCT0 537 aa6.91□□□□□ -1.3
RPGR-209ENST00000494707 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.91□□□□□ -1.3
RPGR-209ENST00000494707 PDZRN3Q9UPQ7 1066 aa6.9□□□□□ -1.3
RPGR-209ENST00000494707 MAP3K7O43318 606 aa6.89□□□□□ -1.31
RPGR-209ENST00000494707 EN1Q05925 392 aaPredicted RBP6.89□□□□□ -1.31
RPGR-209ENST00000494707 DDX12PQ92771 950 aa6.89□□□□□ -1.31
RPGR-209ENST00000494707 MTRQ99707 1265 aa6.89□□□□□ -1.31
RPGR-209ENST00000494707 NBPF26B4DH59 902 aa6.88□□□□□ -1.31
RPGR-209ENST00000494707 SAMD7Q7Z3H4 446 aa6.88□□□□□ -1.31
RPGR-209ENST00000494707 WDR70Q9NW82 654 aa6.88□□□□□ -1.31
RPGR-209ENST00000494707 TSKSQ9UJT2 592 aa6.88□□□□□ -1.31
RPGR-209ENST00000494707 NBR1Q14596 966 aa6.87□□□□□ -1.31
RPGR-209ENST00000494707 SLC4A3P48751 1232 aa6.86□□□□□ -1.31
RPGR-209ENST00000494707 PDIA6Q15084 440 aa6.86□□□□□ -1.31
RPGR-209ENST00000494707 E2F4Q16254 413 aa6.86□□□□□ -1.31
RPGR-209ENST00000494707 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
RPGR-209ENST00000494707 PRSS12P56730 875 aa6.85□□□□□ -1.31
RPGR-209ENST00000494707 CDCA7LQ96GN5 454 aa6.85□□□□□ -1.31
RPGR-209ENST00000494707 SPDYE16A6NNV3 312 aaPredicted RBP6.84□□□□□ -1.31
RPGR-209ENST00000494707 RNF40O75150 1001 aa6.84□□□□□ -1.31
RPGR-209ENST00000494707 TATDN2Q93075 761 aa6.83□□□□□ -1.32
RPGR-209ENST00000494707 ZNF775Q96BV0 537 aaPredicted RBP6.83□□□□□ -1.32
RPGR-209ENST00000494707 PNMA3Q9UL41 463 aa6.83□□□□□ -1.32
RPGR-209ENST00000494707 TSR1Q2NL82 804 aaKnown RBP6.82□□□□□ -1.32
RPGR-209ENST00000494707 PRR14Q9BWN1 585 aa6.82□□□□□ -1.32
RPGR-209ENST00000494707 GRXCR2A6NFK2 248 aa6.81□□□□□ -1.32
RPGR-209ENST00000494707 SMAPO00193 183 aa6.81□□□□□ -1.32
RPGR-209ENST00000494707 ZNF516Q92618 1163 aa6.81□□□□□ -1.32
RPGR-209ENST00000494707 PKDCCQ504Y2 493 aa6.8□□□□□ -1.32
RPGR-209ENST00000494707 SLF2Q8IX21 1173 aa6.8□□□□□ -1.32
RPGR-209ENST00000494707 RBM27Q9P2N5 1060 aaKnown RBP6.8□□□□□ -1.32
RPGR-209ENST00000494707 APLP1P51693 650 aa6.79□□□□□ -1.32
RPGR-209ENST00000494707 TSHZ2Q9NRE2 1034 aa6.79□□□□□ -1.32
RPGR-209ENST00000494707 DGAT1O75907 488 aa6.78□□□□□ -1.32
RPGR-209ENST00000494707 NUDT18Q6ZVK8 323 aa6.77□□□□□ -1.33
RPGR-209ENST00000494707 ARIH1Q9Y4X5 557 aaPredicted RBP6.77□□□□□ -1.33
RPGR-209ENST00000494707 ZPR1O75312 459 aa6.76□□□□□ -1.33
RPGR-209ENST00000494707 SLC19A1P41440 591 aa6.76□□□□□ -1.33
RPGR-209ENST00000494707 PRIM1P49642 420 aaKnown RBP6.76□□□□□ -1.33
RPGR-209ENST00000494707 COPS2P61201 443 aa6.76□□□□□ -1.33
RPGR-209ENST00000494707 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
RPGR-209ENST00000494707 FAM198AQ9UFP1 575 aa6.75□□□□□ -1.33
RPGR-209ENST00000494707 PRR20EP86478 221 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 PRR20CP86479 221 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 PRR20DP86480 221 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 PRR20BP86481 221 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 PRR20AP86496 221 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 CDHR5Q9HBB8 845 aa6.74□□□□□ -1.33
RPGR-209ENST00000494707 ZNF598Q86UK7 904 aaKnown RBP6.73□□□□□ -1.33
RPGR-209ENST00000494707 OSBPP22059 807 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms