RNA–Protein interactions for RNA: ENST00000494620.1

SCRN1-209, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-209ENST00000494620 PTPN23Q9H3S7 1636 aa16.86■□□□□ 0.29
SCRN1-209ENST00000494620 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
SCRN1-209ENST00000494620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCRN1-209ENST00000494620 DAPK1P53355 1430 aa16.86■□□□□ 0.29
SCRN1-209ENST00000494620 TCOF1Q13428 1488 aaKnown RBP16.86■□□□□ 0.29
SCRN1-209ENST00000494620 MROH2AA6NES4 1674 aa16.85■□□□□ 0.29
SCRN1-209ENST00000494620 PKD2Q13563 968 aa16.85■□□□□ 0.29
SCRN1-209ENST00000494620 KANK1Q14678 1352 aa16.85■□□□□ 0.29
SCRN1-209ENST00000494620 TNRQ92752 1358 aa16.84■□□□□ 0.29
SCRN1-209ENST00000494620 SHANK2Q9UPX8 1470 aa16.84■□□□□ 0.29
SCRN1-209ENST00000494620 DUOX2Q9NRD8 1548 aa16.84■□□□□ 0.29
SCRN1-209ENST00000494620 FAM135AQ9P2D6 1515 aa16.84■□□□□ 0.29
SCRN1-209ENST00000494620 CLTCQ00610 1675 aaKnown RBP16.84■□□□□ 0.29
SCRN1-209ENST00000494620 PPARGC1BQ86YN6 1023 aaKnown RBP16.83■□□□□ 0.28
SCRN1-209ENST00000494620 THEMISQ8N1K5 641 aaPredicted RBP16.83■□□□□ 0.28
SCRN1-209ENST00000494620 CERKQ8TCT0 537 aa16.83■□□□□ 0.28
SCRN1-209ENST00000494620 KDM5DQ9BY66 1539 aa16.82■□□□□ 0.28
SCRN1-209ENST00000494620 ERBINQ96RT1 1412 aa16.8■□□□□ 0.28
SCRN1-209ENST00000494620 PTPRTO14522 1441 aa16.79■□□□□ 0.28
SCRN1-209ENST00000494620 NCKAP5LQ9HCH0 1330 aa16.79■□□□□ 0.28
SCRN1-209ENST00000494620 PZPP20742 1482 aa16.79■□□□□ 0.28
SCRN1-209ENST00000494620 NCOA1Q15788 1441 aa16.79■□□□□ 0.28
SCRN1-209ENST00000494620 ANKLE2Q86XL3 938 aa16.78■□□□□ 0.28
SCRN1-209ENST00000494620 ITGAEP38570 1179 aa16.77■□□□□ 0.28
SCRN1-209ENST00000494620 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.27
SCRN1-209ENST00000494620 A2ML1A8K2U0 1454 aa16.75■□□□□ 0.27
SCRN1-209ENST00000494620 EIF2AK4Q9P2K8 1649 aaKnown RBP16.75■□□□□ 0.27
SCRN1-209ENST00000494620 STAG3Q9UJ98 1225 aa16.75■□□□□ 0.27
SCRN1-209ENST00000494620 CAMSAP1Q5T5Y3 1602 aa16.74■□□□□ 0.27
SCRN1-209ENST00000494620 PLA2R1Q13018 1463 aa16.73■□□□□ 0.27
SCRN1-209ENST00000494620 NLRP1Q9C000 1473 aa16.73■□□□□ 0.27
SCRN1-209ENST00000494620 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
SCRN1-209ENST00000494620 ABCC3O15438 1527 aa16.72■□□□□ 0.27
SCRN1-209ENST00000494620 CEP170BQ9Y4F5 1589 aaPredicted RBP16.72■□□□□ 0.27
SCRN1-209ENST00000494620 RNF17Q9BXT8 1623 aaKnown RBP16.71■□□□□ 0.27
SCRN1-209ENST00000494620 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCRN1-209ENST00000494620 STRCQ7RTU9 1775 aa16.71■□□□□ 0.27
SCRN1-209ENST00000494620 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
SCRN1-209ENST00000494620 ARHGAP31Q2M1Z3 1444 aa16.7■□□□□ 0.26
SCRN1-209ENST00000494620 ROCK1Q13464 1354 aa16.68■□□□□ 0.26
SCRN1-209ENST00000494620 MYO3AQ8NEV4 1616 aa16.68■□□□□ 0.26
SCRN1-209ENST00000494620 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
SCRN1-209ENST00000494620 CROCC2H7BZ55 1655 aa16.67■□□□□ 0.26
SCRN1-209ENST00000494620 ZC3H13Q5T200 1668 aaKnown RBP16.67■□□□□ 0.26
SCRN1-209ENST00000494620 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
SCRN1-209ENST00000494620 SLC52A1Q9NWF4 448 aa16.66■□□□□ 0.26
SCRN1-209ENST00000494620 UGGT1Q9NYU2 1555 aa16.65■□□□□ 0.26
SCRN1-209ENST00000494620 DISP3Q9P2K9 1392 aa16.64■□□□□ 0.26
SCRN1-209ENST00000494620 ILDR2Q71H61 639 aa16.64■□□□□ 0.25
SCRN1-209ENST00000494620 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
SCRN1-209ENST00000494620 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
SCRN1-209ENST00000494620 ZNF142P52746 1687 aaPredicted RBP16.63■□□□□ 0.25
SCRN1-209ENST00000494620 HDGFP51858 240 aaKnown RBP16.63■□□□□ 0.25
SCRN1-209ENST00000494620 ZNF335Q9H4Z2 1342 aaPredicted RBP16.63■□□□□ 0.25
SCRN1-209ENST00000494620 SPATA31D1Q6ZQQ2 1576 aa16.63■□□□□ 0.25
SCRN1-209ENST00000494620 SOCS7O14512 581 aa16.62■□□□□ 0.25
SCRN1-209ENST00000494620 IDI1Q13907 227 aa16.62■□□□□ 0.25
SCRN1-209ENST00000494620 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
SCRN1-209ENST00000494620 LMTK2Q8IWU2 1503 aa16.6■□□□□ 0.25
SCRN1-209ENST00000494620 NUP155O75694 1391 aa16.6■□□□□ 0.25
SCRN1-209ENST00000494620 NPHP4O75161 1426 aaPredicted RBP16.59■□□□□ 0.25
SCRN1-209ENST00000494620 BCANQ96GW7 911 aa16.58■□□□□ 0.24
SCRN1-209ENST00000494620 CFAP65Q6ZU64 1925 aaKnown RBP16.57■□□□□ 0.24
SCRN1-209ENST00000494620 CEP152O94986 1710 aa16.57■□□□□ 0.24
SCRN1-209ENST00000494620 RRBP1Q9P2E9 1410 aaKnown RBP16.57■□□□□ 0.24
SCRN1-209ENST00000494620 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
SCRN1-209ENST00000494620 CHGAP10645 457 aaKnown RBP16.56■□□□□ 0.24
SCRN1-209ENST00000494620 RPRD2Q5VT52 1461 aaKnown RBP16.55■□□□□ 0.24
SCRN1-209ENST00000494620 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
SCRN1-209ENST00000494620 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 LTKP29376 864 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 TRIM52Q96A61 297 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 LTBP4Q8N2S1 1624 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 VWDEQ8N2E2 1590 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 MED14O60244 1454 aa16.54■□□□□ 0.24
SCRN1-209ENST00000494620 NOS1P29475 1434 aa16.53■□□□□ 0.24
SCRN1-209ENST00000494620 TMEM2Q9UHN6 1383 aa16.53■□□□□ 0.24
SCRN1-209ENST00000494620 TOM1O60784 492 aa16.53■□□□□ 0.24
SCRN1-209ENST00000494620 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.24
SCRN1-209ENST00000494620 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
SCRN1-209ENST00000494620 SCAF11Q99590 1463 aaKnown RBP16.51■□□□□ 0.23
SCRN1-209ENST00000494620 EFCAB6Q5THR3 1501 aa16.5■□□□□ 0.23
SCRN1-209ENST00000494620 CPS1P31327 1500 aa16.48■□□□□ 0.23
SCRN1-209ENST00000494620 ARHGAP23Q9P227 1491 aa16.48■□□□□ 0.23
SCRN1-209ENST00000494620 SLIT1O75093 1534 aa16.47■□□□□ 0.23
SCRN1-209ENST00000494620 SCAF1Q9H7N4 1312 aaKnown RBP16.46■□□□□ 0.23
SCRN1-209ENST00000494620 ACIN1Q9UKV3 1341 aaKnown RBP16.46■□□□□ 0.23
SCRN1-209ENST00000494620 NEURL4Q96JN8 1562 aa16.46■□□□□ 0.23
SCRN1-209ENST00000494620 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
SCRN1-209ENST00000494620 SLC26A8Q96RN1 970 aa16.45■□□□□ 0.22
SCRN1-209ENST00000494620 TET3O43151 1660 aa16.45■□□□□ 0.22
SCRN1-209ENST00000494620 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
SCRN1-209ENST00000494620 UNC13BO14795 1591 aa16.44■□□□□ 0.22
SCRN1-209ENST00000494620 SLC4A1APQ9BWU0 796 aaKnown RBP16.44■□□□□ 0.22
SCRN1-209ENST00000494620 NAIPQ13075 1403 aa16.44■□□□□ 0.22
SCRN1-209ENST00000494620 KCNA6P17658 529 aa16.43■□□□□ 0.22
SCRN1-209ENST00000494620 PIP4K2BP78356 416 aa16.43■□□□□ 0.22
SCRN1-209ENST00000494620 ZNF326Q5BKZ1 582 aaKnown RBP16.43■□□□□ 0.22
SCRN1-209ENST00000494620 PIK3C2BO00750 1634 aa16.43■□□□□ 0.22
SCRN1-209ENST00000494620 IQGAP1P46940 1657 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms