RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 CRISPLD2Q9H0B8 497 aa10.28□□□□□ -0.76
SNX13-210ENST00000494402 COG6Q9Y2V7 657 aa10.26□□□□□ -0.77
SNX13-210ENST00000494402 SPDYE5A6NIY4 337 aa10.24□□□□□ -0.77
SNX13-210ENST00000494402 USTQ9Y2C2 406 aa10.24□□□□□ -0.77
SNX13-210ENST00000494402 SOX12O15370 315 aa10.23□□□□□ -0.77
SNX13-210ENST00000494402 SPDYE16A6NNV3 312 aaPredicted RBP10.22□□□□□ -0.77
SNX13-210ENST00000494402 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
SNX13-210ENST00000494402 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
SNX13-210ENST00000494402 SND1Q7KZF4 910 aaKnown RBP eCLIP10.21□□□□□ -0.77
SNX13-210ENST00000494402 MS4A3Q96HJ5 214 aa10.21□□□□□ -0.77
SNX13-210ENST00000494402 CABP2Q9NPB3 220 aa10.21□□□□□ -0.77
SNX13-210ENST00000494402 MS4A1P11836 297 aa10.2□□□□□ -0.78
SNX13-210ENST00000494402 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
SNX13-210ENST00000494402 SKIV2LQ15477 1246 aaKnown RBP10.19□□□□□ -0.78
SNX13-210ENST00000494402 POLR3GLQ9BT43 218 aa10.19□□□□□ -0.78
SNX13-210ENST00000494402 WWC1Q8IX03 1113 aa10.18□□□□□ -0.78
SNX13-210ENST00000494402 EFCAB3Q8N7B9 438 aa10.18□□□□□ -0.78
SNX13-210ENST00000494402 CALR3Q96L12 384 aaKnown RBP10.18□□□□□ -0.78
SNX13-210ENST00000494402 PHF8Q9UPP1 1060 aa10.18□□□□□ -0.78
SNX13-210ENST00000494402 GNPATO15228 680 aa10.17□□□□□ -0.78
SNX13-210ENST00000494402 CSB-PGBD3P0DP91 1061 aa10.17□□□□□ -0.78
SNX13-210ENST00000494402 PDIA6Q15084 440 aa10.17□□□□□ -0.78
SNX13-210ENST00000494402 IGSF5Q9NSI5 407 aa10.17□□□□□ -0.78
SNX13-210ENST00000494402 NUTM2FA1L443 756 aa10.16□□□□□ -0.78
SNX13-210ENST00000494402 PPM1GO15355 546 aaPredicted RBP10.16□□□□□ -0.78
SNX13-210ENST00000494402 GALR2O43603 387 aaPredicted RBP10.16□□□□□ -0.78
SNX13-210ENST00000494402 PBXIP1Q96AQ6 731 aa10.16□□□□□ -0.78
SNX13-210ENST00000494402 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
SNX13-210ENST00000494402 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
SNX13-210ENST00000494402 IVNS1ABPQ9Y6Y0 642 aa10.16□□□□□ -0.78
SNX13-210ENST00000494402 UNCXA6NJT0 531 aa10.15□□□□□ -0.78
SNX13-210ENST00000494402 GOLGA2Q08379 1002 aa10.15□□□□□ -0.78
SNX13-210ENST00000494402 OXER1Q8TDS5 423 aa10.15□□□□□ -0.78
SNX13-210ENST00000494402 DPYSL4O14531 572 aa10.13□□□□□ -0.79
SNX13-210ENST00000494402 TIE1P35590 1138 aa10.13□□□□□ -0.79
SNX13-210ENST00000494402 BANK1Q8NDB2 785 aa10.13□□□□□ -0.79
SNX13-210ENST00000494402 TRPC6Q9Y210 931 aa10.13□□□□□ -0.79
SNX13-210ENST00000494402 RBM47A0AV96 593 aaKnown RBP10.12□□□□□ -0.79
SNX13-210ENST00000494402 HIC1Q14526 733 aa10.12□□□□□ -0.79
SNX13-210ENST00000494402 BRD2P25440 801 aaKnown RBP10.11□□□□□ -0.79
SNX13-210ENST00000494402 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
SNX13-210ENST00000494402 GLMNQ92990 594 aa10.1□□□□□ -0.79
SNX13-210ENST00000494402 PPP1R15BQ5SWA1 713 aa10.09□□□□□ -0.79
SNX13-210ENST00000494402 FCHSD2O94868 740 aa10.08□□□□□ -0.8
SNX13-210ENST00000494402 TTLL13PA6NNM8 815 aa10.07□□□□□ -0.8
SNX13-210ENST00000494402 TBC1D12O60347 775 aa10.07□□□□□ -0.8
SNX13-210ENST00000494402 PROCA1Q8NCQ7 364 aaPredicted RBP10.07□□□□□ -0.8
SNX13-210ENST00000494402 SNRKQ9NRH2 765 aa10.07□□□□□ -0.8
SNX13-210ENST00000494402 BMP2KQ9NSY1 1161 aaPredicted RBP10.06□□□□□ -0.8
SNX13-210ENST00000494402 FECHP22830 423 aa10.05□□□□□ -0.8
SNX13-210ENST00000494402 DHX37Q8IY37 1157 aaKnown RBP10.05□□□□□ -0.8
SNX13-210ENST00000494402 REPIN1Q9BWE0 567 aaKnown RBP10.05□□□□□ -0.8
SNX13-210ENST00000494402 CLCN1P35523 988 aa10.03□□□□□ -0.8
SNX13-210ENST00000494402 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.03□□□□□ -0.8
SNX13-210ENST00000494402 GDPD2Q9HCC8 539 aa10.03□□□□□ -0.8
SNX13-210ENST00000494402 EMILIN3Q9NT22 766 aa10.03□□□□□ -0.8
SNX13-210ENST00000494402 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.02□□□□□ -0.81
SNX13-210ENST00000494402 POTEJP0CG39 1038 aa10.02□□□□□ -0.81
SNX13-210ENST00000494402 DRC1Q96MC2 740 aa10.02□□□□□ -0.81
SNX13-210ENST00000494402 PRM3Q9NNZ6 103 aa10.02□□□□□ -0.81
SNX13-210ENST00000494402 POLR3EQ9NVU0 708 aa10.02□□□□□ -0.81
SNX13-210ENST00000494402 GRXCR2A6NFK2 248 aa10.01□□□□□ -0.81
SNX13-210ENST00000494402 TMEM259Q4ZIN3 620 aa10.01□□□□□ -0.81
SNX13-210ENST00000494402 MRRFQ96E11 262 aaKnown RBP10.01□□□□□ -0.81
SNX13-210ENST00000494402 MS4A4AQ96JQ5 239 aa10.01□□□□□ -0.81
SNX13-210ENST00000494402 VRTNQ9H8Y1 702 aa10.01□□□□□ -0.81
SNX13-210ENST00000494402 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
SNX13-210ENST00000494402 NCLP19338 710 aaKnown RBP10□□□□□ -0.81
SNX13-210ENST00000494402 RFC5P40937 340 aa10□□□□□ -0.81
SNX13-210ENST00000494402 SPATA32Q96LK8 384 aa10□□□□□ -0.81
SNX13-210ENST00000494402 POM121CA8CG34 1229 aa9.99□□□□□ -0.81
SNX13-210ENST00000494402 ERCC3P19447 782 aa9.99□□□□□ -0.81
SNX13-210ENST00000494402 FAM163AQ96GL9 167 aaPredicted RBP9.99□□□□□ -0.81
SNX13-210ENST00000494402 TMUB1Q9BVT8 246 aa9.99□□□□□ -0.81
SNX13-210ENST00000494402 GPCPD1Q9NPB8 672 aa9.99□□□□□ -0.81
SNX13-210ENST00000494402 KIAA1522Q9P206 1035 aaPredicted RBP9.99□□□□□ -0.81
SNX13-210ENST00000494402 RFX1P22670 979 aa9.98□□□□□ -0.81
SNX13-210ENST00000494402 ABL2P42684 1182 aa9.98□□□□□ -0.81
SNX13-210ENST00000494402 MAMSTRQ6ZN01 415 aa9.98□□□□□ -0.81
SNX13-210ENST00000494402 CWC22Q9HCG8 908 aaKnown RBP9.98□□□□□ -0.81
SNX13-210ENST00000494402 GPHNQ9NQX3 736 aaPredicted RBP9.98□□□□□ -0.81
SNX13-210ENST00000494402 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.98□□□□□ -0.81
SNX13-210ENST00000494402 GNEQ9Y223 722 aaKnown RBP9.98□□□□□ -0.81
SNX13-210ENST00000494402 SMARCA5O60264 1052 aaPredicted RBP9.97□□□□□ -0.81
SNX13-210ENST00000494402 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
SNX13-210ENST00000494402 SREK1Q8WXA9 508 aaKnown RBP9.97□□□□□ -0.81
SNX13-210ENST00000494402 BEGAINQ9BUH8 593 aa9.97□□□□□ -0.81
SNX13-210ENST00000494402 METRNQ9UJH8 293 aa9.97□□□□□ -0.81
SNX13-210ENST00000494402 CARNS1A5YM72 827 aa9.96□□□□□ -0.82
SNX13-210ENST00000494402 ATN1P54259 1190 aaPredicted RBP9.96□□□□□ -0.82
SNX13-210ENST00000494402 SRPK2P78362 688 aaKnown RBP9.96□□□□□ -0.82
SNX13-210ENST00000494402 ILDR1Q86SU0 546 aaPredicted RBP9.96□□□□□ -0.82
SNX13-210ENST00000494402 C8orf37Q96NL8 207 aa9.96□□□□□ -0.82
SNX13-210ENST00000494402 ATMINO43313 823 aaPredicted RBP9.95□□□□□ -0.82
SNX13-210ENST00000494402 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
SNX13-210ENST00000494402 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
SNX13-210ENST00000494402 ASTLQ6HA08 431 aaPredicted RBP9.95□□□□□ -0.82
SNX13-210ENST00000494402 B4GALNT3Q6L9W6 998 aa9.95□□□□□ -0.82
SNX13-210ENST00000494402 ANKRD13AQ8IZ07 590 aa9.95□□□□□ -0.82
SNX13-210ENST00000494402 MTMR14Q8NCE2 650 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms