RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 MTUS2Q5JR59 1369 aa9.32□□□□□ -0.92
NXF3-206ENST00000494300 TROQ12816 1431 aaPredicted RBP9.31□□□□□ -0.92
NXF3-206ENST00000494300 KIF13AQ9H1H9 1805 aa9.31□□□□□ -0.92
NXF3-206ENST00000494300 KIF14Q15058 1648 aa9.3□□□□□ -0.92
NXF3-206ENST00000494300 CFAP43Q8NDM7 1665 aa9.29□□□□□ -0.92
NXF3-206ENST00000494300 TSPOAP1O95153 1857 aa9.28□□□□□ -0.92
NXF3-206ENST00000494300 MAP3K4Q9Y6R4 1608 aa9.28□□□□□ -0.92
NXF3-206ENST00000494300 PYGBP11216 843 aa9.28□□□□□ -0.92
NXF3-206ENST00000494300 ABCA9Q8IUA7 1624 aa9.27□□□□□ -0.92
NXF3-206ENST00000494300 MAGI3Q5TCQ9 1506 aa9.27□□□□□ -0.93
NXF3-206ENST00000494300 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
NXF3-206ENST00000494300 KIF12Q96FN5 646 aa9.27□□□□□ -0.93
NXF3-206ENST00000494300 PHLDB1Q86UU1 1377 aa9.26□□□□□ -0.93
NXF3-206ENST00000494300 GALR2O43603 387 aaPredicted RBP9.26□□□□□ -0.93
NXF3-206ENST00000494300 EHBP1L1Q8N3D4 1523 aa9.26□□□□□ -0.93
NXF3-206ENST00000494300 CCNB3Q8WWL7 1395 aa9.25□□□□□ -0.93
NXF3-206ENST00000494300 MAP3K13O43283 966 aa9.25□□□□□ -0.93
NXF3-206ENST00000494300 EFCAB2Q5VUJ9 269 aa9.25□□□□□ -0.93
NXF3-206ENST00000494300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.25□□□□□ -0.93
NXF3-206ENST00000494300 TIAM1Q13009 1591 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 KDM6BO15054 1643 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 FANCAO15360 1455 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 MS4A3Q96HJ5 214 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 PCDHB13Q9Y5F0 798 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 LRRIQ1Q96JM4 1722 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 ARHGAP5Q13017 1502 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 TTC37Q6PGP7 1564 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 CFAP74Q9C0B2 1584 aa9.24□□□□□ -0.93
NXF3-206ENST00000494300 PLCH2O75038 1416 aa9.23□□□□□ -0.93
NXF3-206ENST00000494300 NEO1Q92859 1461 aa9.23□□□□□ -0.93
NXF3-206ENST00000494300 MAP3K1Q13233 1512 aa9.23□□□□□ -0.93
NXF3-206ENST00000494300 CFDP1Q9UEE9 299 aaPredicted RBP9.22□□□□□ -0.93
NXF3-206ENST00000494300 ZNF777Q9ULD5 760 aaPredicted RBP9.22□□□□□ -0.93
NXF3-206ENST00000494300 CCDC9Q9Y3X0 531 aaKnown RBP9.22□□□□□ -0.93
NXF3-206ENST00000494300 LRRC9Q6ZRR7 1453 aa9.21□□□□□ -0.93
NXF3-206ENST00000494300 DCBLD2Q96PD2 775 aa9.21□□□□□ -0.94
NXF3-206ENST00000494300 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
NXF3-206ENST00000494300 MYO5CQ9NQX4 1742 aa9.21□□□□□ -0.94
NXF3-206ENST00000494300 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
NXF3-206ENST00000494300 ARAP3Q8WWN8 1544 aa9.21□□□□□ -0.94
NXF3-206ENST00000494300 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
NXF3-206ENST00000494300 SUPT6HQ7KZ85 1726 aaKnown RBP9.2□□□□□ -0.94
NXF3-206ENST00000494300 SGIP1Q9BQI5 828 aa9.2□□□□□ -0.94
NXF3-206ENST00000494300 ADGRL1O94910 1474 aa9.2□□□□□ -0.94
NXF3-206ENST00000494300 DENND4BO75064 1496 aaPredicted RBP9.19□□□□□ -0.94
NXF3-206ENST00000494300 NCOA2Q15596 1464 aa9.19□□□□□ -0.94
NXF3-206ENST00000494300 ECM2O94769 699 aaPredicted RBP9.18□□□□□ -0.94
NXF3-206ENST00000494300 CHRM1P11229 460 aaPredicted RBP9.18□□□□□ -0.94
NXF3-206ENST00000494300 KANK4Q5T7N3 995 aaPredicted RBP9.18□□□□□ -0.94
NXF3-206ENST00000494300 IFNL1Q8IU54 200 aa9.18□□□□□ -0.94
NXF3-206ENST00000494300 PREX2Q70Z35 1606 aa9.17□□□□□ -0.94
NXF3-206ENST00000494300 GPATCH8Q9UKJ3 1502 aaKnown RBP9.17□□□□□ -0.94
NXF3-206ENST00000494300 PLEKHH2Q8IVE3 1493 aa9.17□□□□□ -0.94
NXF3-206ENST00000494300 SCAPERQ9BY12 1400 aa9.17□□□□□ -0.94
NXF3-206ENST00000494300 RAPGEF3O95398 923 aa9.17□□□□□ -0.94
NXF3-206ENST00000494300 ITSN2Q9NZM3 1697 aa9.16□□□□□ -0.94
NXF3-206ENST00000494300 RGL2O15211 777 aa9.15□□□□□ -0.94
NXF3-206ENST00000494300 PCDHB8Q9UN66 801 aa9.15□□□□□ -0.94
NXF3-206ENST00000494300 ZNF518AQ6AHZ1 1483 aa9.15□□□□□ -0.95
NXF3-206ENST00000494300 ZNF467Q7Z7K2 595 aaPredicted RBP9.14□□□□□ -0.95
NXF3-206ENST00000494300 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
NXF3-206ENST00000494300 TRPC6Q9Y210 931 aa9.14□□□□□ -0.95
NXF3-206ENST00000494300 COL17A1Q9UMD9 1497 aaPredicted RBP9.14□□□□□ -0.95
NXF3-206ENST00000494300 CDC42BPAQ5VT25 1732 aa9.14□□□□□ -0.95
NXF3-206ENST00000494300 MYOM3Q5VTT5 1437 aa9.14□□□□□ -0.95
NXF3-206ENST00000494300 POGZQ7Z3K3 1410 aa9.14□□□□□ -0.95
NXF3-206ENST00000494300 ARID4BQ4LE39 1312 aaPredicted RBP9.12□□□□□ -0.95
NXF3-206ENST00000494300 CDC42BPBQ9Y5S2 1711 aa9.12□□□□□ -0.95
NXF3-206ENST00000494300 HNRNPMP52272 730 aaKnown RBP eCLIP9.12□□□□□ -0.95
NXF3-206ENST00000494300 RSPH4AQ5TD94 716 aa9.12□□□□□ -0.95
NXF3-206ENST00000494300 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
NXF3-206ENST00000494300 KIAA1107Q9UPP5 1409 aa9.12□□□□□ -0.95
NXF3-206ENST00000494300 ABCC1P33527 1531 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 SPAG9O60271 1321 aaKnown RBP9.11□□□□□ -0.95
NXF3-206ENST00000494300 MAGI2Q86UL8 1455 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 IGSF3O75054 1194 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 POTEIP0CG38 1075 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 TSPY4P0CV99 314 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 TSPY10P0CW01 314 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 PPARGC1BQ86YN6 1023 aaKnown RBP9.11□□□□□ -0.95
NXF3-206ENST00000494300 AFAP1Q8N556 730 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
NXF3-206ENST00000494300 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 ZNF644Q9H582 1327 aaPredicted RBP9.1□□□□□ -0.95
NXF3-206ENST00000494300 CAMSAP2Q08AD1 1489 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 TIE1P35590 1138 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 FAM50AQ14320 339 aaKnown RBP9.1□□□□□ -0.95
NXF3-206ENST00000494300 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 SAMD9LQ8IVG5 1584 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 ZFYVE16Q7Z3T8 1539 aa9.1□□□□□ -0.95
NXF3-206ENST00000494300 ZBTB7CA1YPR0 619 aa9.09□□□□□ -0.95
NXF3-206ENST00000494300 C1orf115Q9H7X2 142 aa9.09□□□□□ -0.95
NXF3-206ENST00000494300 BMP2KQ9NSY1 1161 aaPredicted RBP9.09□□□□□ -0.95
NXF3-206ENST00000494300 ZMYM4Q5VZL5 1548 aa9.09□□□□□ -0.95
NXF3-206ENST00000494300 RICTORQ6R327 1708 aa9.08□□□□□ -0.96
NXF3-206ENST00000494300 FGD6Q6ZV73 1430 aa9.08□□□□□ -0.96
NXF3-206ENST00000494300 TRAPPC8Q9Y2L5 1435 aa9.08□□□□□ -0.96
NXF3-206ENST00000494300 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
NXF3-206ENST00000494300 ASTLQ6HA08 431 aaPredicted RBP9.08□□□□□ -0.96
NXF3-206ENST00000494300 TMEM106CQ9BVX2 250 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms