RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 PLA2R1Q13018 1463 aa37.8■■■■□ 3.64
TTC3-224ENST00000494243 FBXO31Q5XUX0 539 aaPredicted RBP37.78■■■■□ 3.64
TTC3-224ENST00000494243 KDM5DQ9BY66 1539 aa37.77■■■■□ 3.64
TTC3-224ENST00000494243 FAM135AQ9P2D6 1515 aa37.77■■■■□ 3.64
TTC3-224ENST00000494243 MYOM3Q5VTT5 1437 aa37.76■■■■□ 3.63
TTC3-224ENST00000494243 TCOF1Q13428 1488 aaKnown RBP37.76■■■■□ 3.63
TTC3-224ENST00000494243 PKD2Q13563 968 aa37.75■■■■□ 3.63
TTC3-224ENST00000494243 WASHC2CQ9Y4E1 1318 aa37.75■■■■□ 3.63
TTC3-224ENST00000494243 MIA2Q96PC5 1412 aa37.75■■■■□ 3.63
TTC3-224ENST00000494243 A2ML1A8K2U0 1454 aa37.74■■■■□ 3.63
TTC3-224ENST00000494243 MAST1Q9Y2H9 1570 aa37.74■■■■□ 3.63
TTC3-224ENST00000494243 PZPP20742 1482 aa37.72■■■■□ 3.63
TTC3-224ENST00000494243 TNRQ92752 1358 aa37.7■■■■□ 3.63
TTC3-224ENST00000494243 DNMT1P26358 1616 aaKnown RBP37.7■■■■□ 3.63
TTC3-224ENST00000494243 ZNF335Q9H4Z2 1342 aaPredicted RBP37.65■■■■□ 3.62
TTC3-224ENST00000494243 IQSEC2Q5JU85 1478 aa37.64■■■■□ 3.62
TTC3-224ENST00000494243 RNF17Q9BXT8 1623 aaKnown RBP37.63■■■■□ 3.61
TTC3-224ENST00000494243 EIF2AK4Q9P2K8 1649 aaKnown RBP37.57■■■■□ 3.6
TTC3-224ENST00000494243 ABCC3O15438 1527 aa37.56■■■■□ 3.6
TTC3-224ENST00000494243 APLP2Q06481 763 aa37.55■■■■□ 3.6
TTC3-224ENST00000494243 MROH1Q8NDA8 1641 aa37.53■■■■□ 3.6
TTC3-224ENST00000494243 NLRP1Q9C000 1473 aa37.52■■■■□ 3.6
TTC3-224ENST00000494243 ABCC5O15440 1437 aa37.51■■■■□ 3.59
TTC3-224ENST00000494243 DUOX2Q9NRD8 1548 aa37.51■■■■□ 3.59
TTC3-224ENST00000494243 ZC3H13Q5T200 1668 aaKnown RBP37.5■■■■□ 3.59
TTC3-224ENST00000494243 NEURL4Q96JN8 1562 aa37.5■■■■□ 3.59
TTC3-224ENST00000494243 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.49■■■■□ 3.593e-9■■■■□ 21.4
TTC3-224ENST00000494243 PTPN23Q9H3S7 1636 aa37.49■■■■□ 3.59
TTC3-224ENST00000494243 THEMISQ8N1K5 641 aaPredicted RBP37.48■■■■□ 3.59
TTC3-224ENST00000494243 POLR1AO95602 1720 aaPredicted RBP37.47■■■■□ 3.59
TTC3-224ENST00000494243 SHANK2Q9UPX8 1470 aa37.46■■■■□ 3.59
TTC3-224ENST00000494243 UGGT1Q9NYU2 1555 aa37.46■■■■□ 3.59
TTC3-224ENST00000494243 SPATA31D1Q6ZQQ2 1576 aa37.45■■■■□ 3.59
TTC3-224ENST00000494243 CROCC2H7BZ55 1655 aa37.44■■■■□ 3.58
TTC3-224ENST00000494243 KIF15Q9NS87 1388 aa37.43■■■■□ 3.58
TTC3-224ENST00000494243 ANKLE2Q86XL3 938 aa37.43■■■■□ 3.58
TTC3-224ENST00000494243 FGD6Q6ZV73 1430 aa37.43■■■■□ 3.58
TTC3-224ENST00000494243 ERVK-7P63135 1459 aa37.41■■■■□ 3.58
TTC3-224ENST00000494243 RRP7BPQ9NSQ0 103 aa37.41■■■■□ 3.58
TTC3-224ENST00000494243 DAPK1P53355 1430 aa37.41■■■■□ 3.58
TTC3-224ENST00000494243 CEP152O94986 1710 aa37.4■■■■□ 3.58
TTC3-224ENST00000494243 ERBINQ96RT1 1412 aa37.36■■■■□ 3.57
TTC3-224ENST00000494243 UBAP1LF5GYI3 381 aa37.36■■■■□ 3.57
TTC3-224ENST00000494243 MED14O60244 1454 aa37.35■■■■□ 3.57
TTC3-224ENST00000494243 DEPDC5O75140 1603 aa37.34■■■■□ 3.57
TTC3-224ENST00000494243 PRDM15P57071 1507 aaPredicted RBP37.34■■■■□ 3.57
TTC3-224ENST00000494243 NPHP4O75161 1426 aaPredicted RBP37.31■■■■□ 3.56
TTC3-224ENST00000494243 ARHGAP31Q2M1Z3 1444 aa37.29■■■■□ 3.56
TTC3-224ENST00000494243 CFAP65Q6ZU64 1925 aaKnown RBP37.29■■■■□ 3.56
TTC3-224ENST00000494243 VWDEQ8N2E2 1590 aa37.28■■■■□ 3.56
TTC3-224ENST00000494243 CPS1P31327 1500 aa37.27■■■■□ 3.56
TTC3-224ENST00000494243 CHIC2Q9UKJ5 165 aa37.27■■■■□ 3.56
TTC3-224ENST00000494243 DISP3Q9P2K9 1392 aa37.27■■■■□ 3.56
TTC3-224ENST00000494243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.26■■■■□ 3.565e-7■■□□□ 12.6
TTC3-224ENST00000494243 ANKRD30AQ9BXX3 1397 aa37.24■■■■□ 3.55
TTC3-224ENST00000494243 UBR1Q8IWV7 1749 aa37.22■■■■□ 3.55
TTC3-224ENST00000494243 IQGAP1P46940 1657 aa37.21■■■■□ 3.55
TTC3-224ENST00000494243 KANK1Q14678 1352 aa37.17■■■■□ 3.54
TTC3-224ENST00000494243 ILDR2Q71H61 639 aa37.14■■■■□ 3.54
TTC3-224ENST00000494243 ADGRL2O95490 1459 aa37.13■■■■□ 3.54
TTC3-224ENST00000494243 LMTK2Q8IWU2 1503 aa37.13■■■■□ 3.53
TTC3-224ENST00000494243 ARHGAP23Q9P227 1491 aa37.13■■■■□ 3.53
TTC3-224ENST00000494243 LTKP29376 864 aa37.11■■■■□ 3.53
TTC3-224ENST00000494243 FAM50AQ14320 339 aaKnown RBP37.11■■■■□ 3.53
TTC3-224ENST00000494243 SLIT1O75093 1534 aa37.1■■■■□ 3.53
TTC3-224ENST00000494243 SCAF11Q99590 1463 aaKnown RBP37.1■■■■□ 3.53
TTC3-224ENST00000494243 TOM1O60784 492 aa37.09■■■■□ 3.53
TTC3-224ENST00000494243 STRCP1A6NGW2 1772 aa37.09■■■■□ 3.53
TTC3-224ENST00000494243 TXNDC2Q86VQ3 553 aa37.07■■■■□ 3.52
TTC3-224ENST00000494243 PIK3C2BO00750 1634 aa37.07■■■■□ 3.52
TTC3-224ENST00000494243 PIP4K2BP78356 416 aa37.05■■■■□ 3.52
TTC3-224ENST00000494243 IDI1Q13907 227 aa37.02■■■■□ 3.52
TTC3-224ENST00000494243 SCAF1Q9H7N4 1312 aaKnown RBP37.02■■■■□ 3.52
TTC3-224ENST00000494243 LRRC7Q96NW7 1537 aa37.01■■■■□ 3.52
TTC3-224ENST00000494243 ALKQ9UM73 1620 aa37.01■■■■□ 3.52
TTC3-224ENST00000494243 TMEM2Q9UHN6 1383 aa37■■■■□ 3.51
TTC3-224ENST00000494243 HSPA1LP34931 641 aa36.99■■■■□ 3.51
TTC3-224ENST00000494243 ANKRD50Q9ULJ7 1429 aa36.99■■■■□ 3.51
TTC3-224ENST00000494243 EFCAB6Q5THR3 1501 aa36.99■■■■□ 3.51
TTC3-224ENST00000494243 SYNMO15061 1565 aa36.99■■■■□ 3.51
TTC3-224ENST00000494243 EID1Q9Y6B2 187 aa36.98■■■■□ 3.51
TTC3-224ENST00000494243 NOS1P29475 1434 aa36.98■■■■□ 3.51
TTC3-224ENST00000494243 KDM5AP29375 1690 aaKnown RBP36.96■■■■□ 3.51
TTC3-224ENST00000494243 STAG3Q9UJ98 1225 aa36.95■■■■□ 3.51
TTC3-224ENST00000494243 SLC52A1Q9NWF4 448 aa36.86■■■■□ 3.49
TTC3-224ENST00000494243 RPRD2Q5VT52 1461 aaKnown RBP36.86■■■■□ 3.49
TTC3-224ENST00000494243 SOCS7O14512 581 aa36.85■■■■□ 3.49
TTC3-224ENST00000494243 ADGRB3O60242 1522 aa36.83■■■■□ 3.49
TTC3-224ENST00000494243 TET3O43151 1660 aa36.8■■■■□ 3.48
TTC3-224ENST00000494243 ROCK1Q13464 1354 aa36.79■■■■□ 3.48
TTC3-224ENST00000494243 UNC13BO14795 1591 aa36.78■■■■□ 3.48
TTC3-224ENST00000494243 XIRP1Q702N8 1843 aaKnown RBP36.78■■■■□ 3.48
TTC3-224ENST00000494243 SLC26A8Q96RN1 970 aa36.76■■■■□ 3.48
TTC3-224ENST00000494243 KCNA6P17658 529 aa36.72■■■■□ 3.47
TTC3-224ENST00000494243 MED1Q15648 1581 aaPredicted RBP36.72■■■■□ 3.47
TTC3-224ENST00000494243 GCC2Q8IWJ2 1684 aa36.72■■■■□ 3.47
TTC3-224ENST00000494243 PPARGC1BQ86YN6 1023 aaKnown RBP36.71■■■■□ 3.47
TTC3-224ENST00000494243 ZFYVE9O95405 1425 aa36.68■■■■□ 3.46
TTC3-224ENST00000494243 MYO5BQ9ULV0 1848 aa36.66■■■■□ 3.46
TTC3-224ENST00000494243 E9PCH4 1651 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms