RNA–Protein interactions for RNA: ENST00000494227.3

RN7SL538P-201, Transcript of RNA, 7SL, cytoplasmic 538, pseudogene, humanhuman

BASIC

Gene RN7SL538P, Length 304 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL538P-201ENST00000494227 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
RN7SL538P-201ENST00000494227 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.56□□□□□ -0.24
RN7SL538P-201ENST00000494227 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
RN7SL538P-201ENST00000494227 IQSEC2Q5JU85 1478 aa13.55□□□□□ -0.24
RN7SL538P-201ENST00000494227 CFDP1Q9UEE9 299 aaPredicted RBP13.54□□□□□ -0.24
RN7SL538P-201ENST00000494227 CEP170BQ9Y4F5 1589 aaPredicted RBP13.54□□□□□ -0.24
RN7SL538P-201ENST00000494227 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
RN7SL538P-201ENST00000494227 MIA2Q96PC5 1412 aa13.53□□□□□ -0.24
RN7SL538P-201ENST00000494227 ZNF777Q9ULD5 760 aaPredicted RBP13.52□□□□□ -0.25
RN7SL538P-201ENST00000494227 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
RN7SL538P-201ENST00000494227 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
RN7SL538P-201ENST00000494227 ZNF335Q9H4Z2 1342 aaPredicted RBP13.51□□□□□ -0.25
RN7SL538P-201ENST00000494227 MYT1LQ9UL68 1186 aa13.5□□□□□ -0.25
RN7SL538P-201ENST00000494227 NPATQ14207 1427 aa13.49□□□□□ -0.25
RN7SL538P-201ENST00000494227 CNTLNQ9NXG0 1405 aa13.49□□□□□ -0.25
RN7SL538P-201ENST00000494227 PTPN23Q9H3S7 1636 aa13.48□□□□□ -0.25
RN7SL538P-201ENST00000494227 MED1Q15648 1581 aaPredicted RBP13.48□□□□□ -0.25
RN7SL538P-201ENST00000494227 NEURL4Q96JN8 1562 aa13.48□□□□□ -0.25
RN7SL538P-201ENST00000494227 POLR1AO95602 1720 aaPredicted RBP13.47□□□□□ -0.25
RN7SL538P-201ENST00000494227 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
RN7SL538P-201ENST00000494227 CHIC2Q9UKJ5 165 aa13.47□□□□□ -0.25
RN7SL538P-201ENST00000494227 PLA2R1Q13018 1463 aa13.46□□□□□ -0.25
RN7SL538P-201ENST00000494227 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
RN7SL538P-201ENST00000494227 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
RN7SL538P-201ENST00000494227 ABCC5O15440 1437 aa13.45□□□□□ -0.26
RN7SL538P-201ENST00000494227 DNMT1P26358 1616 aaKnown RBP13.44□□□□□ -0.26
RN7SL538P-201ENST00000494227 ALKQ9UM73 1620 aa13.44□□□□□ -0.26
RN7SL538P-201ENST00000494227 ZMYM3Q14202 1370 aa13.44□□□□□ -0.26
RN7SL538P-201ENST00000494227 CAMSAP2Q08AD1 1489 aa13.43□□□□□ -0.26
RN7SL538P-201ENST00000494227 A2MP01023 1474 aa13.42□□□□□ -0.26
RN7SL538P-201ENST00000494227 RRP7BPQ9NSQ0 103 aa13.42□□□□□ -0.26
RN7SL538P-201ENST00000494227 DAPK1P53355 1430 aa13.41□□□□□ -0.26
RN7SL538P-201ENST00000494227 SETD5Q9C0A6 1442 aa13.41□□□□□ -0.26
RN7SL538P-201ENST00000494227 HRCP23327 699 aa13.41□□□□□ -0.26
RN7SL538P-201ENST00000494227 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
RN7SL538P-201ENST00000494227 UBAP1LF5GYI3 381 aa13.4□□□□□ -0.26
RN7SL538P-201ENST00000494227 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
RN7SL538P-201ENST00000494227 CCER1Q8TC90 406 aaPredicted RBP13.39□□□□□ -0.27
RN7SL538P-201ENST00000494227 MBD5Q9P267 1494 aa13.39□□□□□ -0.27
RN7SL538P-201ENST00000494227 SPAG9O60271 1321 aaKnown RBP13.39□□□□□ -0.27
RN7SL538P-201ENST00000494227 VWDEQ8N2E2 1590 aa13.38□□□□□ -0.27
RN7SL538P-201ENST00000494227 A2ML1A8K2U0 1454 aa13.38□□□□□ -0.27
RN7SL538P-201ENST00000494227 STRCP1A6NGW2 1772 aa13.37□□□□□ -0.27
RN7SL538P-201ENST00000494227 NAIPQ13075 1403 aa13.37□□□□□ -0.27
RN7SL538P-201ENST00000494227 HFM1A2PYH4 1435 aa13.36□□□□□ -0.27
RN7SL538P-201ENST00000494227 KIAA1107Q9UPP5 1409 aa13.35□□□□□ -0.27
RN7SL538P-201ENST00000494227 HSPA1LP34931 641 aa13.34□□□□□ -0.27
RN7SL538P-201ENST00000494227 RSPH4AQ5TD94 716 aa13.34□□□□□ -0.27
RN7SL538P-201ENST00000494227 ROCK1Q13464 1354 aa13.33□□□□□ -0.27
RN7SL538P-201ENST00000494227 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.27
RN7SL538P-201ENST00000494227 TSPY4P0CV99 314 aa13.33□□□□□ -0.28
RN7SL538P-201ENST00000494227 TSPY10P0CW01 314 aa13.33□□□□□ -0.28
RN7SL538P-201ENST00000494227 RNF39Q9H2S5 420 aa13.33□□□□□ -0.28
RN7SL538P-201ENST00000494227 CPS1P31327 1500 aa13.33□□□□□ -0.28
RN7SL538P-201ENST00000494227 KDM5DQ9BY66 1539 aa13.33□□□□□ -0.28
RN7SL538P-201ENST00000494227 PLEKHH2Q8IVE3 1493 aa13.32□□□□□ -0.28
RN7SL538P-201ENST00000494227 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
RN7SL538P-201ENST00000494227 PZPP20742 1482 aa13.31□□□□□ -0.28
RN7SL538P-201ENST00000494227 SHANK2Q9UPX8 1470 aa13.31□□□□□ -0.28
RN7SL538P-201ENST00000494227 PKD2Q13563 968 aa13.31□□□□□ -0.28
RN7SL538P-201ENST00000494227 GGT6Q6P531 493 aa13.31□□□□□ -0.28
RN7SL538P-201ENST00000494227 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
RN7SL538P-201ENST00000494227 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
RN7SL538P-201ENST00000494227 RNF17Q9BXT8 1623 aaKnown RBP13.29□□□□□ -0.28
RN7SL538P-201ENST00000494227 ANKRD30AQ9BXX3 1397 aa13.29□□□□□ -0.28
RN7SL538P-201ENST00000494227 ADGRL2O95490 1459 aa13.29□□□□□ -0.28
RN7SL538P-201ENST00000494227 CCDC141Q6ZP82 1450 aa13.29□□□□□ -0.28
RN7SL538P-201ENST00000494227 ZC3H13Q5T200 1668 aaKnown RBP13.28□□□□□ -0.28
RN7SL538P-201ENST00000494227 TNRQ92752 1358 aa13.28□□□□□ -0.28
RN7SL538P-201ENST00000494227 SYNMO15061 1565 aa13.28□□□□□ -0.28
RN7SL538P-201ENST00000494227 DEPDC5O75140 1603 aa13.28□□□□□ -0.28
RN7SL538P-201ENST00000494227 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.29
RN7SL538P-201ENST00000494227 XIRP1Q702N8 1843 aaKnown RBP13.26□□□□□ -0.29
RN7SL538P-201ENST00000494227 MROH1Q8NDA8 1641 aa13.25□□□□□ -0.29
RN7SL538P-201ENST00000494227 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
RN7SL538P-201ENST00000494227 ZEB1P37275 1124 aaPredicted RBP13.25□□□□□ -0.29
RN7SL538P-201ENST00000494227 TRIM52Q96A61 297 aa13.25□□□□□ -0.29
RN7SL538P-201ENST00000494227 CEP152O94986 1710 aa13.25□□□□□ -0.29
RN7SL538P-201ENST00000494227 FAM135AQ9P2D6 1515 aa13.24□□□□□ -0.29
RN7SL538P-201ENST00000494227 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
RN7SL538P-201ENST00000494227 MED14O60244 1454 aa13.23□□□□□ -0.29
RN7SL538P-201ENST00000494227 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
RN7SL538P-201ENST00000494227 KIF15Q9NS87 1388 aa13.23□□□□□ -0.29
RN7SL538P-201ENST00000494227 ABCC3O15438 1527 aa13.23□□□□□ -0.29
RN7SL538P-201ENST00000494227 UBR1Q8IWV7 1749 aa13.22□□□□□ -0.29
RN7SL538P-201ENST00000494227 DHX29Q7Z478 1369 aaKnown RBP13.22□□□□□ -0.29
RN7SL538P-201ENST00000494227 RTEL1-TNFRSF6BF6WH68 1400 aa13.22□□□□□ -0.29
RN7SL538P-201ENST00000494227 ANKRD50Q9ULJ7 1429 aa13.22□□□□□ -0.29
RN7SL538P-201ENST00000494227 SRCAPQ6ZRS2 3230 aa13.21□□□□□ -0.29
RN7SL538P-201ENST00000494227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.29
RN7SL538P-201ENST00000494227 NLRP1Q9C000 1473 aa13.21□□□□□ -0.3
RN7SL538P-201ENST00000494227 CROCC2H7BZ55 1655 aa13.21□□□□□ -0.3
RN7SL538P-201ENST00000494227 MAST1Q9Y2H9 1570 aa13.2□□□□□ -0.3
RN7SL538P-201ENST00000494227 SETD1AO15047 1707 aaKnown RBP13.2□□□□□ -0.3
RN7SL538P-201ENST00000494227 MPHOSPH9Q99550 1183 aa13.2□□□□□ -0.3
RN7SL538P-201ENST00000494227 ERVK-7P63135 1459 aa13.19□□□□□ -0.3
RN7SL538P-201ENST00000494227 SIN3AQ96ST3 1273 aa13.19□□□□□ -0.3
RN7SL538P-201ENST00000494227 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
RN7SL538P-201ENST00000494227 CLSPNQ9HAW4 1339 aa13.18□□□□□ -0.3
RN7SL538P-201ENST00000494227 KIF3BO15066 747 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms