RNA–Protein interactions for RNA: ENST00000494051.1

SSB-212, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 392 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-212ENST00000494051 PRIM1P49642 420 aaKnown RBP13.26□□□□□ -0.29
SSB-212ENST00000494051 EN1Q05925 392 aaPredicted RBP13.25□□□□□ -0.29
SSB-212ENST00000494051 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
SSB-212ENST00000494051 KCNK17Q96T54 332 aa13.23□□□□□ -0.29
SSB-212ENST00000494051 AXIN2Q9Y2T1 843 aa13.23□□□□□ -0.29
SSB-212ENST00000494051 PTPREP23469 700 aa13.22□□□□□ -0.29
SSB-212ENST00000494051 C6orf132Q5T0Z8 1188 aa13.22□□□□□ -0.29
SSB-212ENST00000494051 RBM26Q5T8P6 1007 aaKnown RBP13.22□□□□□ -0.29
SSB-212ENST00000494051 KCNH8Q96L42 1107 aa13.22□□□□□ -0.29
SSB-212ENST00000494051 ARHGAP33O14559 1287 aa13.21□□□□□ -0.29
SSB-212ENST00000494051 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
SSB-212ENST00000494051 PBX2P40425 430 aa13.2□□□□□ -0.3
SSB-212ENST00000494051 PSEN2P49810 448 aa13.2□□□□□ -0.3
SSB-212ENST00000494051 POTEEQ6S8J3 1075 aa13.2□□□□□ -0.3
SSB-212ENST00000494051 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
SSB-212ENST00000494051 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
SSB-212ENST00000494051 RNF166Q96A37 237 aaPredicted RBP13.15□□□□□ -0.3
SSB-212ENST00000494051 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
SSB-212ENST00000494051 COL9A1P20849 921 aa13.14□□□□□ -0.31
SSB-212ENST00000494051 LMOD2Q6P5Q4 547 aa13.14□□□□□ -0.31
SSB-212ENST00000494051 DMRTA1Q5VZB9 504 aa13.13□□□□□ -0.31
SSB-212ENST00000494051 PPP1R3GB7ZBB8 358 aa13.12□□□□□ -0.31
SSB-212ENST00000494051 LSM11P83369 360 aaKnown RBP eCLIP13.11□□□□□ -0.31
SSB-212ENST00000494051 ANKRD13DQ6ZTN6 518 aa13.1□□□□□ -0.31
SSB-212ENST00000494051 GPIHBP1Q8IV16 184 aa13.1□□□□□ -0.31
SSB-212ENST00000494051 CERKQ8TCT0 537 aa13.08□□□□□ -0.32
SSB-212ENST00000494051 NPDC1Q9NQX5 325 aaPredicted RBP13.08□□□□□ -0.32
SSB-212ENST00000494051 PTGDRQ13258 359 aa13.07□□□□□ -0.32
SSB-212ENST00000494051 FCHSD2O94868 740 aa13.06□□□□□ -0.32
SSB-212ENST00000494051 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
SSB-212ENST00000494051 PROX2Q3B8N5 592 aa13.05□□□□□ -0.32
SSB-212ENST00000494051 PRSS12P56730 875 aa13.03□□□□□ -0.32
SSB-212ENST00000494051 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
SSB-212ENST00000494051 ADGRD1Q6QNK2 874 aa13.02□□□□□ -0.33
SSB-212ENST00000494051 VPS9D1Q9Y2B5 631 aa13.02□□□□□ -0.33
SSB-212ENST00000494051 TK2O00142 265 aa13.01□□□□□ -0.33
SSB-212ENST00000494051 SLC4A5Q9BY07 1137 aa13.01□□□□□ -0.33
SSB-212ENST00000494051 GPR37O15354 613 aa13□□□□□ -0.33
SSB-212ENST00000494051 TRIM6-TRIM34B2RNG4 842 aa12.99□□□□□ -0.33
SSB-212ENST00000494051 HIC1Q14526 733 aa12.99□□□□□ -0.33
SSB-212ENST00000494051 PADI6Q6TGC4 694 aa12.99□□□□□ -0.33
SSB-212ENST00000494051 GNPATO15228 680 aa12.98□□□□□ -0.33
SSB-212ENST00000494051 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
SSB-212ENST00000494051 TSKSQ9UJT2 592 aa12.98□□□□□ -0.33
SSB-212ENST00000494051 ZC3H15Q8WU90 426 aaKnown RBP12.97□□□□□ -0.33
SSB-212ENST00000494051 PACS2Q86VP3 889 aa12.96□□□□□ -0.33
SSB-212ENST00000494051 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
SSB-212ENST00000494051 FECHP22830 423 aa12.95□□□□□ -0.34
SSB-212ENST00000494051 FAM198AQ9UFP1 575 aa12.95□□□□□ -0.34
SSB-212ENST00000494051 RABGEF1Q9UJ41 708 aa12.95□□□□□ -0.34
SSB-212ENST00000494051 MYT1LQ9UL68 1186 aa12.95□□□□□ -0.34
SSB-212ENST00000494051 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
SSB-212ENST00000494051 STAC3Q96MF2 364 aa12.94□□□□□ -0.34
SSB-212ENST00000494051 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
SSB-212ENST00000494051 HRO43593 1189 aa12.91□□□□□ -0.34
SSB-212ENST00000494051 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
SSB-212ENST00000494051 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
SSB-212ENST00000494051 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
SSB-212ENST00000494051 ZMYND10O75800 440 aa12.89□□□□□ -0.35
SSB-212ENST00000494051 FAM161AQ3B820 660 aa12.89□□□□□ -0.35
SSB-212ENST00000494051 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
SSB-212ENST00000494051 SEPT9Q9UHD8 586 aaPredicted RBP12.89□□□□□ -0.35
SSB-212ENST00000494051 PNMA3Q9UL41 463 aa12.89□□□□□ -0.35
SSB-212ENST00000494051 C3orf80F5H4A9 247 aa12.88□□□□□ -0.35
SSB-212ENST00000494051 SMAPO00193 183 aa12.88□□□□□ -0.35
SSB-212ENST00000494051 MRPL50Q8N5N7 158 aaKnown RBP12.88□□□□□ -0.35
SSB-212ENST00000494051 TATDN2Q93075 761 aa12.88□□□□□ -0.35
SSB-212ENST00000494051 KRI1Q8N9T8 703 aaKnown RBP12.87□□□□□ -0.35
SSB-212ENST00000494051 BARGINQ6ZT62 677 aa12.86□□□□□ -0.35
SSB-212ENST00000494051 ADGRG1Q9Y653 693 aa12.86□□□□□ -0.35
SSB-212ENST00000494051 MAP2K5Q13163 448 aa12.85□□□□□ -0.35
SSB-212ENST00000494051 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
SSB-212ENST00000494051 RBM46Q8TBY0 533 aaKnown RBP12.83□□□□□ -0.36
SSB-212ENST00000494051 IRF6O14896 467 aa12.82□□□□□ -0.36
SSB-212ENST00000494051 OATP04181 439 aa12.82□□□□□ -0.36
SSB-212ENST00000494051 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
SSB-212ENST00000494051 TPRNQ4KMQ1 711 aa12.82□□□□□ -0.36
SSB-212ENST00000494051 LAPTM4BQ86VI4 370 aa12.82□□□□□ -0.36
SSB-212ENST00000494051 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
SSB-212ENST00000494051 EYA1Q99502 592 aa12.81□□□□□ -0.36
SSB-212ENST00000494051 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
SSB-212ENST00000494051 CCDC102AQ96A19 550 aa12.78□□□□□ -0.36
SSB-212ENST00000494051 ZFRQ96KR1 1074 aaKnown RBP12.78□□□□□ -0.36
SSB-212ENST00000494051 PXYLP1Q8TE99 480 aa12.77□□□□□ -0.37
SSB-212ENST00000494051 SLC24A3Q9HC58 644 aa12.76□□□□□ -0.37
SSB-212ENST00000494051 RCCD1A6NED2 376 aa12.75□□□□□ -0.37
SSB-212ENST00000494051 WNT2BQ93097 391 aa12.75□□□□□ -0.37
SSB-212ENST00000494051 KCTD12Q96CX2 325 aaKnown RBP12.75□□□□□ -0.37
SSB-212ENST00000494051 ANKK1Q8NFD2 765 aa12.74□□□□□ -0.37
SSB-212ENST00000494051 DNAJB2P25686 324 aa12.73□□□□□ -0.37
SSB-212ENST00000494051 HDGFP51858 240 aaKnown RBP12.73□□□□□ -0.37
SSB-212ENST00000494051 NLRP7Q8WX94 980 aa12.73□□□□□ -0.37
SSB-212ENST00000494051 PHOX2BQ99453 314 aa12.73□□□□□ -0.37
SSB-212ENST00000494051 SAMD7Q7Z3H4 446 aa12.72□□□□□ -0.37
SSB-212ENST00000494051 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
SSB-212ENST00000494051 AK7Q96M32 723 aa12.71□□□□□ -0.37
SSB-212ENST00000494051 PRKCSHP14314 528 aaPredicted RBP12.7□□□□□ -0.38
SSB-212ENST00000494051 SWT1Q5T5J6 900 aaKnown RBP12.69□□□□□ -0.38
SSB-212ENST00000494051 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
SSB-212ENST00000494051 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms