RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ROCK2O75116 1388 aaKnown RBP15.85■□□□□ 0.13
RFC4-214ENST00000494047 BCORL1Q5H9F3 1711 aa15.85■□□□□ 0.13
RFC4-214ENST00000494047 ADAMTSL3P82987 1691 aa15.84■□□□□ 0.13
RFC4-214ENST00000494047 SAMD9LQ8IVG5 1584 aa15.84■□□□□ 0.13
RFC4-214ENST00000494047 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
RFC4-214ENST00000494047 MYT1LQ9UL68 1186 aa15.84■□□□□ 0.13
RFC4-214ENST00000494047 MBD5Q9P267 1494 aa15.83■□□□□ 0.12
RFC4-214ENST00000494047 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
RFC4-214ENST00000494047 HSPA5P11021 654 aaKnown RBP15.83■□□□□ 0.12
RFC4-214ENST00000494047 TRAPPC8Q9Y2L5 1435 aa15.82■□□□□ 0.12
RFC4-214ENST00000494047 WASHC2AQ641Q2 1341 aa15.81■□□□□ 0.12
RFC4-214ENST00000494047 RSPH4AQ5TD94 716 aa15.81■□□□□ 0.12
RFC4-214ENST00000494047 REREQ9P2R6 1566 aa15.81■□□□□ 0.12
RFC4-214ENST00000494047 PZPP20742 1482 aa15.81■□□□□ 0.12
RFC4-214ENST00000494047 SPATA31E1Q6ZUB1 1445 aa15.81■□□□□ 0.12
RFC4-214ENST00000494047 SLC4A1APQ9BWU0 796 aaKnown RBP15.8■□□□□ 0.12
RFC4-214ENST00000494047 CHIC2Q9UKJ5 165 aa15.8■□□□□ 0.12
RFC4-214ENST00000494047 SYCP2Q9BX26 1530 aa15.8■□□□□ 0.12
RFC4-214ENST00000494047 UHRF1BP1Q6BDS2 1440 aa15.8■□□□□ 0.12
RFC4-214ENST00000494047 KTN1Q86UP2 1357 aaKnown RBP15.8■□□□□ 0.12
RFC4-214ENST00000494047 FKBP8Q14318 412 aa15.79■□□□□ 0.12
RFC4-214ENST00000494047 HNRNPMP52272 730 aaKnown RBP eCLIP15.78■□□□□ 0.12
RFC4-214ENST00000494047 L3MBTL2Q969R5 705 aa15.78■□□□□ 0.12
RFC4-214ENST00000494047 DIP2CQ9Y2E4 1556 aa15.78■□□□□ 0.12
RFC4-214ENST00000494047 SPAG9O60271 1321 aaKnown RBP15.78■□□□□ 0.12
RFC4-214ENST00000494047 ANKRD50Q9ULJ7 1429 aa15.77■□□□□ 0.12
RFC4-214ENST00000494047 PTPRMP28827 1452 aa15.77■□□□□ 0.11
RFC4-214ENST00000494047 RALGAPBQ86X10 1494 aa15.77■□□□□ 0.11
RFC4-214ENST00000494047 KIDINS220Q9ULH0 1771 aa15.77■□□□□ 0.11
RFC4-214ENST00000494047 TSHZ2Q9NRE2 1034 aa15.76■□□□□ 0.11
RFC4-214ENST00000494047 AGLP35573 1532 aa15.75■□□□□ 0.11
RFC4-214ENST00000494047 ABCA6Q8N139 1617 aa15.75■□□□□ 0.11
RFC4-214ENST00000494047 MADDQ8WXG6 1647 aa15.75■□□□□ 0.11
RFC4-214ENST00000494047 ZBED9Q6R2W3 1325 aa15.75■□□□□ 0.11
RFC4-214ENST00000494047 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
RFC4-214ENST00000494047 RTEL1-TNFRSF6BF6WH68 1400 aa15.74■□□□□ 0.11
RFC4-214ENST00000494047 SIGLEC1Q9BZZ2 1709 aa15.74■□□□□ 0.11
RFC4-214ENST00000494047 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
RFC4-214ENST00000494047 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
RFC4-214ENST00000494047 PRKRIP1Q9H875 184 aaPredicted RBP15.73■□□□□ 0.11
RFC4-214ENST00000494047 ZNF644Q9H582 1327 aaPredicted RBP15.72■□□□□ 0.11
RFC4-214ENST00000494047 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
RFC4-214ENST00000494047 FER1L4A9Z1Z3 1794 aa15.71■□□□□ 0.11
RFC4-214ENST00000494047 RIMS1Q86UR5 1692 aaKnown RBP15.71■□□□□ 0.11
RFC4-214ENST00000494047 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.11
RFC4-214ENST00000494047 MLECQ14165 292 aa15.7■□□□□ 0.1
RFC4-214ENST00000494047 LAMC1P11047 1609 aa15.69■□□□□ 0.1
RFC4-214ENST00000494047 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
RFC4-214ENST00000494047 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
RFC4-214ENST00000494047 HIRIP3Q9BW71 556 aaPredicted RBP15.69■□□□□ 0.1
RFC4-214ENST00000494047 USP47Q96K76 1375 aa15.67■□□□□ 0.1
RFC4-214ENST00000494047 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
RFC4-214ENST00000494047 ESF1Q9H501 851 aaKnown RBP15.67■□□□□ 0.1
RFC4-214ENST00000494047 A2MP01023 1474 aa15.67■□□□□ 0.1
RFC4-214ENST00000494047 EIF2AK4Q9P2K8 1649 aaKnown RBP15.66■□□□□ 0.1
RFC4-214ENST00000494047 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
RFC4-214ENST00000494047 UNC13BO14795 1591 aa15.66■□□□□ 0.1
RFC4-214ENST00000494047 PPP6R1Q9UPN7 881 aa15.65■□□□□ 0.1
RFC4-214ENST00000494047 SETD1BQ9UPS6 1966 aaKnown RBP15.65■□□□□ 0.1
RFC4-214ENST00000494047 MRS2Q9HD23 443 aa15.63■□□□□ 0.09
RFC4-214ENST00000494047 DHX29Q7Z478 1369 aaKnown RBP15.63■□□□□ 0.09
RFC4-214ENST00000494047 PPP4R2Q9NY27 417 aa15.62■□□□□ 0.09
RFC4-214ENST00000494047 KIF15Q9NS87 1388 aa15.62■□□□□ 0.09
RFC4-214ENST00000494047 NUP155O75694 1391 aa15.61■□□□□ 0.09
RFC4-214ENST00000494047 INSRP06213 1382 aa15.61■□□□□ 0.09
RFC4-214ENST00000494047 PKD2Q13563 968 aa15.61■□□□□ 0.09
RFC4-214ENST00000494047 NBPF8Q3BBV2 869 aa15.61■□□□□ 0.09
RFC4-214ENST00000494047 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
RFC4-214ENST00000494047 E9PCH4 1651 aa15.6■□□□□ 0.09
RFC4-214ENST00000494047 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
RFC4-214ENST00000494047 IQGAP3Q86VI3 1631 aa15.59■□□□□ 0.09
RFC4-214ENST00000494047 FAM135AQ9P2D6 1515 aa15.59■□□□□ 0.09
RFC4-214ENST00000494047 MROH2AA6NES4 1674 aa15.58■□□□□ 0.09
RFC4-214ENST00000494047 ERBINQ96RT1 1412 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 BRD4O60885 1362 aaPredicted RBP15.56■□□□□ 0.08
RFC4-214ENST00000494047 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 WASHC2CQ9Y4E1 1318 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 RALBP1Q15311 655 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 GGT6Q6P531 493 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 BCANQ96GW7 911 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 DUOX2Q9NRD8 1548 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
RFC4-214ENST00000494047 ILDR1Q86SU0 546 aaPredicted RBP15.55■□□□□ 0.08
RFC4-214ENST00000494047 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
RFC4-214ENST00000494047 C3P01024 1663 aa15.55■□□□□ 0.08
RFC4-214ENST00000494047 PREX1Q8TCU6 1659 aa15.55■□□□□ 0.08
RFC4-214ENST00000494047 TRPM1Q7Z4N2 1603 aa15.55■□□□□ 0.08
RFC4-214ENST00000494047 CEBPAP49715 358 aaPredicted RBP15.54■□□□□ 0.08
RFC4-214ENST00000494047 FOXD1Q16676 465 aa15.54■□□□□ 0.08
RFC4-214ENST00000494047 PLPPR3Q6T4P5 718 aa15.54■□□□□ 0.08
RFC4-214ENST00000494047 ZMYM3Q14202 1370 aa15.54■□□□□ 0.08
RFC4-214ENST00000494047 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
RFC4-214ENST00000494047 KIF3BO15066 747 aa15.53■□□□□ 0.08
RFC4-214ENST00000494047 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
RFC4-214ENST00000494047 NPATQ14207 1427 aa15.53■□□□□ 0.08
RFC4-214ENST00000494047 CARD11Q9BXL7 1154 aa15.51■□□□□ 0.07
RFC4-214ENST00000494047 CLTCQ00610 1675 aaKnown RBP15.51■□□□□ 0.07
RFC4-214ENST00000494047 C11orf95C9JLR9 678 aaPredicted RBP15.49■□□□□ 0.07
RFC4-214ENST00000494047 NUDCQ9Y266 331 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms