RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CNTLNQ9NXG0 1405 aa19.14■□□□□ 0.65
VCP-207ENST00000493886 MAGI2Q86UL8 1455 aa19.14■□□□□ 0.65
VCP-207ENST00000493886 ASXL2Q76L83 1435 aa19.13■□□□□ 0.65
VCP-207ENST00000493886 SPAG9O60271 1321 aaKnown RBP19.13■□□□□ 0.65
VCP-207ENST00000493886 DAXXQ9UER7 740 aaPredicted RBP19.12■□□□□ 0.65
VCP-207ENST00000493886 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
VCP-207ENST00000493886 CCDC144AA2RUR9 1427 aa19.12■□□□□ 0.65
VCP-207ENST00000493886 FANCAO15360 1455 aa19.12■□□□□ 0.65
VCP-207ENST00000493886 POLR1AO95602 1720 aaPredicted RBP19.12■□□□□ 0.65
VCP-207ENST00000493886 RALGAPBQ86X10 1494 aa19.12■□□□□ 0.65
VCP-207ENST00000493886 AFAP1Q8N556 730 aa19.12■□□□□ 0.65
VCP-207ENST00000493886 USP47Q96K76 1375 aa19.11■□□□□ 0.65
VCP-207ENST00000493886 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
VCP-207ENST00000493886 FKBP8Q14318 412 aa19.11■□□□□ 0.65
VCP-207ENST00000493886 PLA2R1Q13018 1463 aa19.1■□□□□ 0.65
VCP-207ENST00000493886 ZFYVE16Q7Z3T8 1539 aa19.1■□□□□ 0.65
VCP-207ENST00000493886 KDM2AQ9Y2K7 1162 aa19.1■□□□□ 0.65
VCP-207ENST00000493886 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
VCP-207ENST00000493886 KDM5CP41229 1560 aa19.09■□□□□ 0.65
VCP-207ENST00000493886 TSHZ2Q9NRE2 1034 aa19.07■□□□□ 0.64
VCP-207ENST00000493886 NPM1P06748 294 aaKnown RBP eCLIP19.06■□□□□ 0.64
VCP-207ENST00000493886 ADGRL1O94910 1474 aa19.05■□□□□ 0.64
VCP-207ENST00000493886 CARD11Q9BXL7 1154 aa19.05■□□□□ 0.64
VCP-207ENST00000493886 ATP10AO60312 1499 aa19.04■□□□□ 0.64
VCP-207ENST00000493886 BCORL1Q5H9F3 1711 aa19.04■□□□□ 0.64
VCP-207ENST00000493886 SCAPERQ9BY12 1400 aa19.04■□□□□ 0.64
VCP-207ENST00000493886 PLEKHG5O94827 1062 aa19.04■□□□□ 0.64
VCP-207ENST00000493886 ATP7AQ04656 1500 aa19.04■□□□□ 0.64
VCP-207ENST00000493886 INO80Q9ULG1 1556 aaPredicted RBP19.04■□□□□ 0.64
VCP-207ENST00000493886 ANO8Q9HCE9 1232 aaPredicted RBP19.03■□□□□ 0.64
VCP-207ENST00000493886 RGL3Q3MIN7 710 aa19.01■□□□□ 0.63
VCP-207ENST00000493886 PRAG1Q86YV5 1406 aa19.01■□□□□ 0.63
VCP-207ENST00000493886 A2MP01023 1474 aa19■□□□□ 0.63
VCP-207ENST00000493886 PRKRIP1Q9H875 184 aaPredicted RBP18.99■□□□□ 0.63
VCP-207ENST00000493886 ROCK2O75116 1388 aaKnown RBP18.99■□□□□ 0.63
VCP-207ENST00000493886 ARID4BQ4LE39 1312 aaPredicted RBP18.99■□□□□ 0.63
VCP-207ENST00000493886 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
VCP-207ENST00000493886 MYT1LQ9UL68 1186 aa18.98■□□□□ 0.63
VCP-207ENST00000493886 TRPM1Q7Z4N2 1603 aa18.97■□□□□ 0.63
VCP-207ENST00000493886 E9PCH4 1651 aa18.97■□□□□ 0.63
VCP-207ENST00000493886 NEFLP07196 543 aa18.95■□□□□ 0.62
VCP-207ENST00000493886 ST20-MTHFSA0A0A6YYL1 179 aa18.95■□□□□ 0.62
VCP-207ENST00000493886 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
VCP-207ENST00000493886 DHX29Q7Z478 1369 aaKnown RBP18.94■□□□□ 0.62
VCP-207ENST00000493886 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
VCP-207ENST00000493886 KANK1Q14678 1352 aa18.93■□□□□ 0.62
VCP-207ENST00000493886 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
VCP-207ENST00000493886 KIF3BO15066 747 aa18.93■□□□□ 0.62
VCP-207ENST00000493886 TET3O43151 1660 aa18.92■□□□□ 0.62
VCP-207ENST00000493886 ZNF518AQ6AHZ1 1483 aa18.92■□□□□ 0.62
VCP-207ENST00000493886 VWDEQ8N2E2 1590 aa18.92■□□□□ 0.62
VCP-207ENST00000493886 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
VCP-207ENST00000493886 TRPM2O94759 1503 aa18.91■□□□□ 0.62
VCP-207ENST00000493886 GPRASP1Q5JY77 1395 aa18.91■□□□□ 0.62
VCP-207ENST00000493886 CCDC184Q52MB2 194 aa18.91■□□□□ 0.62
VCP-207ENST00000493886 CFAP74Q9C0B2 1584 aa18.91■□□□□ 0.62
VCP-207ENST00000493886 NBPF1Q3BBV0 1214 aa18.9■□□□□ 0.62
VCP-207ENST00000493886 PTPRTO14522 1441 aa18.9■□□□□ 0.62
VCP-207ENST00000493886 SPHKAPQ2M3C7 1700 aa18.9■□□□□ 0.62
VCP-207ENST00000493886 PRDM15P57071 1507 aaPredicted RBP18.89■□□□□ 0.61
VCP-207ENST00000493886 LAMC1P11047 1609 aa18.88■□□□□ 0.61
VCP-207ENST00000493886 MROH1Q8NDA8 1641 aa18.88■□□□□ 0.61
VCP-207ENST00000493886 HNRNPUQ00839 825 aaKnown RBP eCLIP18.88■□□□□ 0.61
VCP-207ENST00000493886 MRS2Q9HD23 443 aa18.87■□□□□ 0.61
VCP-207ENST00000493886 IRX6P78412 446 aaPredicted RBP18.86■□□□□ 0.61
VCP-207ENST00000493886 POGZQ7Z3K3 1410 aa18.86■□□□□ 0.61
VCP-207ENST00000493886 CEP152O94986 1710 aa18.86■□□□□ 0.61
VCP-207ENST00000493886 CLTCL1P53675 1640 aa18.86■□□□□ 0.61
VCP-207ENST00000493886 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
VCP-207ENST00000493886 RNF17Q9BXT8 1623 aaKnown RBP18.81■□□□□ 0.6
VCP-207ENST00000493886 FAM9BQ8IZU0 186 aa18.8■□□□□ 0.6
VCP-207ENST00000493886 MADDQ8WXG6 1647 aa18.8■□□□□ 0.6
VCP-207ENST00000493886 HECW2Q9P2P5 1572 aa18.8■□□□□ 0.6
VCP-207ENST00000493886 NEO1Q92859 1461 aa18.8■□□□□ 0.6
VCP-207ENST00000493886 EFCAB6Q5THR3 1501 aa18.79■□□□□ 0.6
VCP-207ENST00000493886 STAC3Q96MF2 364 aa18.79■□□□□ 0.6
VCP-207ENST00000493886 CNGB1Q14028 1251 aaPredicted RBP18.79■□□□□ 0.6
VCP-207ENST00000493886 LMTK2Q8IWU2 1503 aa18.78■□□□□ 0.6
VCP-207ENST00000493886 TESK2Q96S53 571 aa18.77■□□□□ 0.6
VCP-207ENST00000493886 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
VCP-207ENST00000493886 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.6
VCP-207ENST00000493886 PPRC1Q5VV67 1664 aaKnown RBP18.77■□□□□ 0.59
VCP-207ENST00000493886 NEURL4Q96JN8 1562 aa18.76■□□□□ 0.59
VCP-207ENST00000493886 CYB5RLQ6IPT4 315 aa18.75■□□□□ 0.59
VCP-207ENST00000493886 ABCA6Q8N139 1617 aa18.74■□□□□ 0.59
VCP-207ENST00000493886 UGGT1Q9NYU2 1555 aa18.74■□□□□ 0.59
VCP-207ENST00000493886 DISP3Q9P2K9 1392 aa18.73■□□□□ 0.59
VCP-207ENST00000493886 RAPGEF3O95398 923 aa18.73■□□□□ 0.59
VCP-207ENST00000493886 MAP3K4Q9Y6R4 1608 aa18.71■□□□□ 0.59
VCP-207ENST00000493886 KIF1BO60333 1816 aa18.71■□□□□ 0.59
VCP-207ENST00000493886 TMF1P82094 1093 aa18.71■□□□□ 0.59
VCP-207ENST00000493886 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
VCP-207ENST00000493886 GGT6Q6P531 493 aa18.71■□□□□ 0.59
VCP-207ENST00000493886 RBM19Q9Y4C8 960 aaKnown RBP18.71■□□□□ 0.59
VCP-207ENST00000493886 KTN1Q86UP2 1357 aaKnown RBP18.71■□□□□ 0.59
VCP-207ENST00000493886 UBE2Q2Q8WVN8 375 aa18.7■□□□□ 0.58
VCP-207ENST00000493886 RALBP1Q15311 655 aa18.69■□□□□ 0.58
VCP-207ENST00000493886 ZBED9Q6R2W3 1325 aa18.69■□□□□ 0.58
VCP-207ENST00000493886 RIMBP3CA6NJZ7 1639 aa18.68■□□□□ 0.58
VCP-207ENST00000493886 RIMBP3BA6NNM3 1639 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms